Alligator mississippiensis (American alligator): 102571510
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Entry
102571510 CDS
T03087
Symbol
TP53BP1
Name
(RefSeq) tumor protein p53 binding protein 1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102571510 (TP53BP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
Tudor_5
BRCT_2
DUF4537
RTT107_BRCT_5
SH3_Hsr9
Tudor_2
Motif
Other DBs
NCBI-GeneID:
102571510
NCBI-ProteinID:
XP_006271215
LinkDB
All DBs
Position
Un
AA seq
2056 aa
AA seq
DB search
MMSSSRDQKRTVGGDVGVDAIEPSPEKQLAEPMDTSTHLETTGSLSEVLDQLPQPSSKSS
VLGLVVAAVEGADEDAADCTAHSLGAEGSGTSQLHFGALELSQSQDLEGDSSLHEEGNEH
CLRPAETSCKETEDELCAVKKETLPGGETCTGTQYQQEEESKRTPQPPQDTARKPRSVCD
LLESGLQVEKSCDPALQEPEILSTQEDMFPESNSAASSSACAITKVEEGGPLACTPAGTL
HLLHLSGQGSLAQESLSIDSSGPAAPSSIFRSSALIPSSPTEQEETQDEQMDMAALAGGE
LALKQQKGDELMEVDNPPTPSGPPVLPQASTPVSQSAPVFTSGSFPVPSQPEFSHDIFIP
TPSLEERPGREEKAGALPDVCLSADNSGPMEAVPKIPTGGPVFSETSDSCKLVLSASECN
QPIKTEGTTGSLRTDQDSESTQVEVDSTPPALELKLCSMENDSMKLRMSEDSQTLMEEDG
EKAEEGETMRAPATAAAAAGVTAGGTVAQTSCIDRMCESGSQAIAALASQPDTLPCVLGR
EALTEIKEKLLRARPQLEAIPETQCEEQGERRADEKQLEEEGSSLCQTPSQGLTVLREEQ
HHKGQEAMEVESAEGSSKSCKKLCELSQRDQETEKKEASTGLGVVEAKDMEGLSLKAGQE
TMAKLSDLASQPLVGESLGQQDGSWPRLPAGVPPAVALCARKHSDVQGNRDQSESHLEQD
QEMEWESQEQPLARGNEVSVTLPENQQLPPKTGDEVPLTLPESQQPPPERGDEVPLTLPE
NQQPPRETGDEVLAAPWENQQLPPETGDEVLVTPQESQPPPLGIGQKVPAALPESQPPRL
GRGDEVPTAVPESQPPTLGRGDEVPTALPDSQPPTLGRGDEVPTALPDSQPPTLGRGDEE
PTALVRGDQEPAAVPESQPPTLERGNEVSVALGRGDQVSAALPESQPPPLILPEKAGDIP
EKQVKTTHLEQEEAHLQERADDHFPSPSSGTSFHFTLPKEGDIIQPLTSLTPSPINQLQK
GPRRHSTPIEVGSCPDSTIATSEVTAEGTLGTNNVTVESAVTSADISEERDKGDCAVLAA
ADGKLCLRMSLVTPVNEGSDESPSFSLEKPAAGERKNGSSAVAGAVARGNLFSSPSTQEE
EEPLSVDPGASPRLQPLSWEQAQASQAVSPDSEPQLSRVEEESMDVDVVQDQKAEGEKSM
QEKLSTTVSAKERDTCQEAWSGTSSKGVQTTVDFPLAPATVSTGTQTAKGTCSQVEAGTS
MAGQRPDRQDAKVQTEESGEKLVNASGDDTESLHSQEEEERNLSHPPGCRVQHRHVRTIR
EVRTVVTRVITDVYYVDGAEVERKVVEEAEEPVVECQECEVDVSPSRTTGGSSLTSGDLG
DVSSFSSKASSLHRTSSGASSSLSATHSGGSSGRGAGAGSTKGKVCGMEAGEFALPSGKG
ALGKLSPRKGTGQPGSPLRPGQTAALTMCEEEDDRHGGKTPVTPRGRGRRGRPPSRAAGT
RDASGSGLPGVEDLPAMALSEEKAFARTVRLPEGGDRPEGAGPCTLRRSDSPEIPLQVVA
GPVESADSSAGSSFVGLRVVAKWSSNGYFYSGKITQDVGAGKYKLLFDDGYECDVLGKDI
LLCDPIPLETEVTALSEDEYFSAGVVKGHRKESGELYYCVEKEGQRKWYKRMAVILSLEQ
GNKLREQFGLGPYEPATPLTKAADISLDNLVEGKRKRRSNLGSPSTSSSSTTPTRKGPES
PRVPSGLLSGKRKLVTSEDERSPSKRGRKSAAIKTGAVKAGEFPTSCESGDNVLDPSALE
DHHGPLPHNKTLFLGYAFLLTMATPSDKLANRQKLLDGAAGSSEEEEEFLEMMPYNKQYT
AMQLRAGAGYILEDFNETQCSAAYRCLLIADQHCRTRKYLLCLASGIPCVSHVWVHDSCH
ANQLQNYQNYLLPAGYSLQEQRLLEWHPRESPFQNLKVLLVSDQRQNFLELWSEILMMGG
AASVKQHHSSAQNKDIALGVFDVVVTDLSCPAAVLKCAEALRLPVISQEWVIQSLIAGER
MGYNKHPKYKYDYVPR
NT seq
6171 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccagctctcgggatcagaaacggacagtgggaggagacgtaggggtcgacgct
attgagccttctccagaaaagcagcttgcagagccaatggacacatctacccatctggag
accactggttcactcagcgaagtccttgaccagttgccccagcccagcagcaagagcagt
gttctcgggttggtggtagctgctgttgagggggccgatgaagatgctgcagactgcact
gcccactcactgggcgctgaaggctcaggcacgtcgcagctgcattttggagccctggaa
ctgtcacagagccaggaccttgagggggactcctcactgcatgaggagggcaatgagcat
tgccttcgtcctgcagaaacctcctgtaaagagaccgaggatgagctgtgcgccgttaag
aaagaaactttgcctggtggagaaacatgtactgggacacagtaccagcaggaggaggag
tctaaaagaactcctcaaccacctcaagatactgctaggaaaccaaggtctgtctgcgat
ttgcttgaaagtggattgcaagttgagaagtcatgtgatcctgctcttcaggagccagag
attctatcaactcaggaagatatgtttcctgagagcaactcagcagcttcaagcagtgcc
tgtgccataaccaaggtggaagagggaggtcccctggcatgcacccctgctggcactctt
cacctcctgcatctctctggacagggatcccttgcacaggagagtctttccattgattct
tcaggcccagctgctccttctagtatcttcaggtccagtgctcttatccccagcagtccc
acagaacaggaagaaacgcaagatgaacagatggatatggctgctctagcaggaggggaa
cttgccctgaagcaacagaagggagatgaactgatggaagttgataatcctcccacccca
tcaggacctccagtgctaccccaggcttcaactccagtatcccagagtgcaccagtcttc
acttctggatcctttcctgtaccatcacaaccagagttctcccatgatattttcattcca
actccgagtctagaggagaggcctggaagagaagagaaggctggtgccttacctgatgtg
tgcttgtcagcagataactctggacccatggaggctgtgcccaaaattcctacagggggt
cctgtgttttcagagaccagtgattcctgtaaactagtgctctctgcaagtgaatgtaac
cagcccataaagacggaaggaactacaggctccttgaggactgaccaggacagtgaatcc
acacaggtagaggtggattccacacccccagctttggagctgaaactctgttccatggag
aatgacagcatgaagctgagaatgagtgaggacagccaaactctaatggaagaggatggt
gaaaaagcagaagagggcgagaccatgagagcacctgccactgctgcggctgctgcaggt
gtaacagcaggtggaactgtggcacagacaagttgcattgatcgcatgtgtgaatctgga
agtcaggctattgcagctctagccagtcagcctgacactttgccatgtgttttgggtcga
gaagcactgactgagattaaggaaaaactgttgagagccaggcctcagttggaagcaatt
cctgagactcagtgtgaggaacaaggtgagaggcgtgcagatgagaagcagctagaggaa
gaagggtcctctctgtgccaaaccccctctcagggcctgactgttctaagggaagagcag
catcacaaaggccaggaagcgatggaagtggaatctgctgagggctctagcaaaagttgt
aaaaagctttgtgaactgagccaaagggatcaggagaccgagaagaaagaggcctccaca
ggcttgggtgttgtggaagcgaaggacatggagggcttgtccctgaaggctggtcaagaa
accatggcaaagctcagtgaccttgcctctcagcctcttgtgggagagtcactgggacaa
caggatggctcctggcctcggttaccagcaggtgttcccccagcagtggcactgtgtgcc
agaaagcattcagatgttcaagggaacagggatcaaagtgaaagccatctggaacaggat
caggaaatggaatgggagagtcaggagcagcctctggcaagaggaaatgaggtgtctgtg
accctgccagagaaccagcagctccctccaaaaacaggggatgaagtgcccctgaccctt
ccagagagccagcagccaccgccagagagaggggatgaggtgcccctgaccctgccagaa
aaccagcagccacctcgagagacgggggatgaagtgcttgctgccccatgggagaaccag
cagctccctccagagacaggggatgaggtgctggtgaccccacaggagagccagccacct
cctctgggaatagggcagaaagtgcctgcagccctgccagagagccagccgccccgtctg
gggagaggggatgaggtgccgacagctgtgccagagagccagccacccacgctagggaga
ggggatgaggtgccaacagccctgccggacagccagccgcccacgctagggagaggggat
gaggtgccaacagccctgcccgacagccagccgcccactctagggagaggggatgaggag
cccacagccttggtgagaggggaccaggagcccgcagccgtgccggagagccagcccccc
actctggagagagggaatgaggtttctgtagccctggggagaggggaccaggtgtctgca
gccctgccggagagccagccaccccctctcattctgccagagaaagcaggagatatacct
gaaaaacaggtgaagaccactcacctggagcaagaggaggcgcacctgcaggagagggca
gacgaccacttccccagcccatccagcggaacttcatttcatttcacattgcccaaggag
ggtgatataattcagcccttgaccagcctgactccatcccctattaatcagcttcaaaag
ggacctagaagacacagcactccaattgaggttggcagctgtccagacagcaccatagca
accagtgaggtcacagcagagggcaccctggggaccaacaatgtcactgtggagagtgcc
gtgacatcagcagacatatcggaagagcgtgacaaaggggattgtgccgtgctcgctgcg
gctgatgggaagctgtgtctgcgaatgagcctcgttactcctgtgaatgagggaagtgat
gagtctccgtccttcagtttggagaagcctgcagccggtgaaaggaaaaatggatcctct
gctgttgccggagctgttgccaggggaaacctgttcagttccccaagcacgcaggaggag
gaagagccgctgtctgtggatcctggtgcttcaccacgcctgcagcctctcagctgggag
caggcccaggcttctcaggctgtatcgccggactccgaaccacagctgtcccgtgtggaa
gaagagtctatggacgttgacgttgtacaggatcagaaagcggaaggggagaagagcatg
caagaaaagctgagtacgactgtgtcggcgaaagagagggatacatgccaggaggcatgg
tcgggcaccagcagtaaaggcgtccaaaccactgtagattttccattggccccagcaact
gtatcaacaggaacacagacagcaaagggaacgtgcagccaggtggaagcggggaccagc
atggctgggcagaggccagaccgacaggatgccaaggtccaaactgaggagagtggagaa
aagcttgtgaatgcatctggtgatgacacagagtccctgcatagtcaggaagaggaggag
cgtaacctgtctcacccgcctggatgccgggtccagcaccgccacgtgagaaccatccgg
gaagtgcgcactgttgtcacgcgtgtcatcacagacgtttactacgtagatggtgccgag
gtggagcggaaggtggttgaggaagcggaggagcctgtggtggagtgccaggagtgtgag
gtggatgtctccccctctcgaacaacgggaggctcctcgttgacgtcgggggacctcggg
gatgtcagctccttctcatccaaggcctccagcctccaccgcacatctagcggagcaagc
agcagtttgtcagccacgcacagcggcggcagctccgggaggggagctggagctggatct
accaaagggaaagtctgcgggatggaagctggagagtttgccttacccagcggcaaagga
gcgctcggaaaactgagccctaggaaagggactggtcagccagggtctcctttgaggcct
ggacagacagcagcactgacaatgtgtgaggaggaggatgaccgtcacggggggaaaacc
cctgttacacctcgtggtcgagggagaaggggccgcccaccatctcgagcagctgggaca
agagatgcatctgggagtggtctgccaggcgtggaggatcttccagccatggccttgtct
gaggagaaggcctttgctcgcacagttcgcctgcccgagggcggggacaggcctgagggc
gccggcccctgcaccttgcgccgaagcgactctccggaaatcccactgcaggtggtggct
ggtcccgtggagagcgcggactcgtctgccgggagcagctttgtgggtctccgggttgta
gccaagtggtcctcaaacggctacttctattctgggaagatcacccaggatgtgggggcc
gggaagtacaagctgctctttgatgatgggtacgaatgcgacgtcctgggcaaagatatt
ctgctttgcgaccccatcccactggagacggaggtgactgcgctctctgaagacgagtat
ttcagtgcaggtgttgtgaaagggcacaggaaggagtcgggagagctgtactactgtgtc
gagaaggaaggccagcgcaagtggtacaagcggatggctgtcatcctgtccctggagcaa
gggaacaagcttcgggagcagtttggcttgggtccttacgaacctgccacgcccctgacc
aaggcggcggacatcagcctggacaacctggtggaggggaagcggaagaggcgcagtaac
ctcggctcacccagcacatccagcagcagcacaacgccgacccgcaaggggccggagagc
ccgcgtgtgccctcggggctgctgtctgggaagaggaagctggtcacctctgaggacgag
aggtccccgtccaagcgtgggcgcaagtctgcagccataaaaactggcgcagtgaaggca
ggagagttcccaacttcctgcgagagcggcgacaacgtgctggacccctcggccctggag
gaccatcatgggccgttgcctcacaataagaccctctttctgggctatgccttcctcctc
accatggcaacccccagtgacaagctggccaatcgccagaagctcttggacggtgccgcg
ggcagcagcgaggaagaggaagagttcctggaaatgatgccgtacaacaagcagtacaca
gcaatgcagctgcgtgcaggagctggctacatcctggaggacttcaatgaaacccagtgc
agcgcagcctaccggtgcctcctgattgcagaccagcactgccgaacccgcaagtactta
ctgtgccttgccagcggaatcccctgcgtgtcccacgtctgggtccacgacagctgccac
gccaaccagctgcagaactaccagaactacctgctcccggctggctacagcctgcaggag
cagcggctgctggagtggcatcctcgcgagagccccttccaaaacctgaaggtgctgctg
gtgtccgaccagcgccagaacttcctggagctgtggtcagagatcctcatgatggggggc
gcggcgtctgtgaagcagcatcactcgagtgctcagaacaaagatatcgccttgggggtc
ttcgacgtggtggtaacagacttgtcctgtccggctgctgtcctgaagtgcgcagaagcc
ttgcgtctgcccgtcatctcgcaagagtgggtgatccagagccttattgctggggagaga
atgggctacaacaagcatccaaagtataaatatgactacgtgccccgctag
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