Alligator mississippiensis (American alligator): 102571792
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Entry
102571792 CDS
T03087
Symbol
PTCHD4
Name
(RefSeq) patched domain containing 4
KO
K24682
patched domain-containing protein
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amj04990
]
102571792 (PTCHD4)
Domain-containing proteins not elsewhere classified [BR:
amj04990
]
Other domain-containing proteins
Patched domain-containing proteins
102571792 (PTCHD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
102571792
NCBI-ProteinID:
XP_014457094
LinkDB
All DBs
Position
Un
AA seq
904 aa
AA seq
DB search
MCRRRRPGGSASRTRGRMLRQVIHRGLQALCYKLGLFVSRHPVFFLTVPAVLTIIFGFSL
LSRFQPETDLETLVAPSHSLAKIERSLAGSLFPLEQAKSQLYSDLHTPGRYGRVILLSPA
GGNILHQADVILQIHRAVLEMKVNYKGYNYTFSHLCVLRNQDKKCVLDDIISVLEDLRQA
ALSNKTTARVQVSYPNTKLKDGRSSFIGHQLGGVMEVPNSKDQRVKSARAIQITYYLQTY
GSVTQDLIGEKWESEFCKLMHKMQLDHQDLQLFSLVSFSLWKDFHKTSILARGKVLVSLM
LILVTATLSSSMKDCLRSKPFLGLLGVLTICISSVTAAGIFFITDGKYNSTLLGIPFFAM
GHGTKGVFELLSGWRRTRENLPFKDRVADAYSDVMVSYTMTSSLYFIAFGMGASPFTNIE
AVKIFCQNMCVSILLNYFYIFSFFGSCLVFAGQLEQNRYHSIFCCKIPSAEYLDRKPVWF
QTMMSDGHQHTSHHETNPYQHHFIQHFLREHYNEWITNIYVKPFVVILYLIYASFSFMGC
LQISDGANIINLLASDSPSVSYALIQQKYFSNYSPVIGFYIYEPLEYWNGTVQEDLKTLS
HGFNTVSWMEQYYQYLRVSNISATNKSDFISILQSSFLKKPEFQHFKNDIIFSKTGDENN
IIASRMYLVARTSENTQREVVELLEKLRPLSLIQSIKFIVFNPTFVFMDHYGLSVTMPVL
ISGFGILLMLILTFFLVIHPLGNFWLILSVTSIELGVLGLMTLWNVDMDCISILCLIYTL
NFAIDHCAPLLYTFVLATEHTRTQCIKNSLQEHGTAILQNITSFLIGLVPLLFVPSNLTF
TLFKCLLLTGSCTLLHCFVILPVFLTFFPPSKKHHKKKKRAKRKEREEIECIEIQENPDH
VTAV
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtgccgccggagacgcccgggaggctccgcaagccggactcgggggaggatgctgcgg
caggtgatacacagagggctccaggcgctgtgctacaagctgggcttgttcgtgagccgg
cacccggtgtttttcctcaccgtgcccgcagtcctgaccatcatcttcggcttcagcctg
ctcagccgcttccagcccgagactgacctggagaccctggtggcccccagccacagcctg
gccaagatcgagaggagcttagcgggcagcctcttccccctggagcaagccaaaagccag
ctctattcggacttgcacaccccagggaggtatggcagggtgatcctcctctccccagcc
ggagggaatattttgcaccaggctgatgtgatcctgcagatccaccgagccgtgctggaa
atgaaggtgaactacaaaggctataattatactttttcccatctgtgtgtgttgagaaat
caggataagaaatgcgtgctggatgatataatttcagtgctagaggatctgaggcaggct
gccctctccaataagacaacagccagggtgcaagtgagctatcccaacactaaattaaag
gatggaaggagcagttttattggacaccagcttggaggggtcatggaggtgccaaacagc
aaggaccagagagtaaaatcagccagagccatccaaatcacctactacctccaaacctac
ggctcggtcacccaagacctcattggtgaaaaatgggagagcgaattctgtaaactaatg
cacaaaatgcagctggatcaccaagacctgcagctcttctcactggtgtcctttagcctg
tggaaggacttccacaagaccagcatcctggccaggggcaaggttttggtgagcctgatg
ctgattcttgtgactgctaccctctccagctccatgaaggactgcctacgcagcaagcct
ttcctcgggctcctgggagtgcttactatctgtatctccagtgtcactgcagcagggata
tttttcattactgatggaaaatataactctactctgctgggaatccctttcttcgctatg
ggtcatggaaccaaaggcgtgtttgagctactttcaggatggcgcagaaccagagagaat
ctgccctttaaggatagggtagcagatgcctactcagatgtcatggtctcctatacaatg
acaagctccttgtacttcatagcctttggaatgggtgccagccccttcaccaatattgag
gctgtgaaaattttctgccagaacatgtgtgtctccatcctattgaactacttctatatt
ttctccttctttggctcctgcctagtttttgctggacagctggagcagaaccgctaccac
agcatcttctgctgtaaaatcccttcagcagaatacctggaccggaaacccgtgtggttc
caaaccatgatgagtgatggccatcagcatacttctcatcatgaaaccaacccgtaccag
catcacttcatccagcacttcctacgagaacattacaatgagtggattactaacatctat
gtcaagccatttgtagtgatactgtacctcatttatgcctctttctcctttatggggtgc
ttgcagatcagcgatggggccaatattatcaacctccttgccagtgattctccaagcgtc
tcttatgccctcatccagcaaaagtattttagcaactacagcccagtaataggattctac
atctatgagcctcttgaatactggaatggcactgtacaagaagacttaaaaacactgagc
catgggttcaatacagtgtcctggatggaacagtactatcaatacctgagagttagcaac
atcagcgccactaacaaaagtgactttatcagcatcctccagagctcctttttaaaaaaa
ccagaattccagcacttcaaaaatgacatcattttctccaagactggagatgagaacaat
atcattgcttctcgcatgtacctggtggccaggactagtgaaaacacacaaagagaggtg
gtggaattgttggagaagttaagaccgctctctctaatccagagcatcaagttcattgtg
ttcaatcctacttttgttttcatggaccactatggtttatcagtaactatgcctgtcctg
atttctggctttggcatcctgctgatgttaatactgacctttttcctggttattcatcct
ctgggaaacttctggttaattctcagcgtcacctcaatagagctgggtgtcctaggtttg
atgactttatggaatgtagacatggattgcatttctatactgtgccttatctacactttg
aatttcgccatagatcactgtgcacccctgctttatacatttgtattagcaaccgagcac
acccgaactcagtgtataaaaaactccctccaagagcatgggacagccattttgcaaaat
attacttcttttcttattgggttggtcccccttctctttgtgccttcgaacttgaccttc
acactgttcaaatgcttgctgctcactggcagttgcacacttctgcactgttttgttatt
ctccccgtctttctaacctttttcccaccctccaaaaagcaccacaagaaaaagaaacgg
gctaaaaggaaggagcgggaagaaatcgaatgcatagaaattcaggagaatcctgatcat
gtaaccgcagtctga
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