Alligator mississippiensis (American alligator): 102571870
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Entry
102571870 CDS
T03087
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102571870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
amj00536
]
102571870
Glycosaminoglycan binding proteins [BR:
amj00536
]
Heparan sulfate / Heparin
Axon guidance molecules
102571870
SSDB
Ortholog
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GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
102571870
NCBI-ProteinID:
XP_019356431
UniProt:
A0A151MG86
LinkDB
All DBs
Position
Un
AA seq
582 aa
AA seq
DB search
MWCVAWGLGVVLPFHLGLLSLAAEAPDPCYDAQRQPRYCLPELMDLAAGHPVVASATCGH
SPQRLCAAQGPPGPRLCLLCNQASPATAHPAAYLTDPAGEATCWHSGPVPNATLTLALGG
RFEVLYVAIRFCTPRPHSMAIYKSMDYGRSWIPFQFFSRRCRSTYGQPPALAVLKGMEHE
ATCTDGQTSPNPPTRGLVAFMPLAGRPSASAFEYSPVLQDWVMATDLRMTLDRRHRAREL
GVRGREASYGVSELQVGGRCQCNGHASHCHVPSRDGAPQCQCQHDTTGPECETCRAFYRD
RPWQRATPSDAHECVTCQCHQHSHRCRFSMELYELSGRKSGGVCLHCRHHTTGRHCHYCQ
PGFWRDPRRPLTSHKACKACQCHPIGAVSNFCNQTTGQCQCKVGVAGLTCNRCAQGFQQS
RSALMPCVRIQEVLTTTPAYPLEWNPGTECRSHCTPSHGRIRMNLRNYCKKDYVLHAQIT
AAEESGEWQKFTALVLAVYLQRSVPIRRGEHPLWVPQQDLACDCLRLQVDKAYLVIGNDA
ESPDPARLVLDRNSLALPWRDAWAHKLRSFQQQNRRGQCRVP
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgtgtcgcatggggccttggagtcgtgctccccttccacctgggcctgctgagc
cttgctgctgaggcccctgacccctgctatgatgcacagcgccagcctcgctactgcctg
cccgagctgatggacctggctgcagggcatcctgttgttgcctctgccacctgtgggcac
agcccccagcgcctttgcgcagcccagggcccccctgggccccgactctgcctcctctgc
aaccaggcatctcctgccactgcccaccctgcagcctacctcactgacccggcaggcgaa
gccacctgctggcactcagggcctgtgcccaatgccaccctaaccctggcactgggggga
cgctttgaggtgctatatgtggcaatacggttctgcaccccacggccccactccatggcc
atctacaaatccatggactacgggcgcagctggatacccttccagttcttctccaggcgt
tgccgcagcacctatgggcagcccccagccttggccgtcctcaagggcatggagcatgag
gctacctgcactgatggccagactagccccaacccaccaactagggggcttgtggccttc
atgcccctggctgggcgcccttcagctagcgcttttgagtacagcccagtgctccaggac
tgggtgatggccactgacctgcggatgacgctggatcgccggcaccgggcacgggagctg
ggggtccgtggacgggaggcctcctatggggtgtccgagttgcaggtggggggacggtgc
cagtgcaatgggcatgcctctcactgccatgtgcccagcagggatggggccccccagtgt
cagtgtcaacatgacacaactggccccgagtgcgagacatgccgcgccttttaccgtgac
cggccctggcagagggcaacaccaagcgatgcccacgagtgtgttacctgtcagtgccac
cagcactcccaccggtgccgcttcagtatggagctgtatgagctgtcgggccgcaagagt
gggggggtgtgcctgcactgccggcaccacacgactgggcggcactgccactactgccag
ccaggcttctggcgtgacccacgccgtcccctcaccagccacaaggcctgcaaggcctgc
cagtgccatcccattggcgcagtcagcaacttctgcaaccagacaaccgggcagtgccag
tgcaaagtaggtgtcgctgggctcacctgcaaccgttgtgctcaaggcttccagcagagc
cgctccgccctcatgccctgtgtccgcattcaggaggtgctgaccactacacctgcctac
cccctggagtggaacccaggtactgaatgcaggagccactgcactccgtcccatggccgt
atccgcatgaacctgaggaattactgcaaaaaggactatgtgctgcacgcccagatcacg
gctgcagaggagtcgggtgagtggcagaagttcacggccttggtgctggccgtatacctg
cagcgaagtgtgccgatccgccggggcgagcacccgctctgggtgccccagcaagacctg
gcctgcgactgcttgcggctccaggtggacaaggcctacctggtcatcggcaatgacgca
gagtcccccgaccctgcgcgtctggtgctggacaggaacagcctggcactgccctggcgg
gatgcctgggcacacaagttgcggagcttccagcagcagaaccggcgggggcagtgtcgg
gtgccctga
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