KEGG   Alligator mississippiensis (American alligator): 102571945
Entry
102571945         CDS       T03087                                 
Symbol
RAB5A
Name
(RefSeq) RAB5A, member RAS oncogene family
  KO
K07887  Ras-related protein Rab-5A
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04137  Mitophagy - animal
amj04144  Endocytosis
amj04145  Phagosome
amj04148  Efferocytosis
amj05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:amj00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102571945 (RAB5A)
   04145 Phagosome
    102571945 (RAB5A)
   04137 Mitophagy - animal
    102571945 (RAB5A)
   04148 Efferocytosis
    102571945 (RAB5A)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102571945 (RAB5A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amj04131]
    102571945 (RAB5A)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amj04147]
    102571945 (RAB5A)
   04031 GTP-binding proteins [BR:amj04031]
    102571945 (RAB5A)
Membrane trafficking [BR:amj04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    102571945 (RAB5A)
 Endosome - Lysosome transport
    102571945 (RAB5A)
Exosome [BR:amj04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102571945 (RAB5A)
  Exosomal proteins of other body fluids (saliva and urine)
   102571945 (RAB5A)
  Exosomal proteins of colorectal cancer cells
   102571945 (RAB5A)
  Exosomal proteins of bladder cancer cells
   102571945 (RAB5A)
GTP-binding proteins [BR:amj04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    102571945 (RAB5A)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase AAA_16 MCR_beta BrnT_toxin
Other DBs
NCBI-GeneID: 102571945
NCBI-ProteinID: XP_006268549
UniProt: A0A151MQT9
LinkDB
Position
Un
AA seq 215 aa
MANRGATRPNGPNAANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
QASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKK
LPKNEPQNAGANSARGRGVDLTEPTQPTKSQCCSN
NT seq 648 nt   +upstreamnt  +downstreamnt
atggctaatagaggagcaacaaggcccaatgggccaaatgctgcaaataaaatatgccag
ttcaaactagtactactgggagagtctgcagttggcaaatcaagtttggtgctccgtttt
gtaaagggccagtttcacgagtttcaagagagtactattggagctgcttttctaacccag
actgtatgtcttgatgacacaacagtaaaatttgaaatttgggatacagccggtcaagaa
cgatatcacagtttagcaccaatgtactacagaggagcacaagcagcaatagttgtatat
gacattacaaatgaggaatcatttgcaagagcgaagaattgggtcaaagaattgcagcgg
caagcaagtcctaatattgtaatagctttagcaggaaataaagctgacctagctaacaaa
agagctgtggatttccaggaagcacaggcttatgcagatgacaacagcttattgttcatg
gagacatctgctaaaacatctatgaatgtaaatgaaatattcatggcaattgctaaaaaa
ttgccaaagaatgaaccacaaaatgcaggagccaactctgccagaggaagaggagtagat
cttactgaacccacacaaccaaccaagagtcaatgttgtagtaactaa

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