Alligator mississippiensis (American alligator): 102572038
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Entry
102572038 CDS
T03087
Symbol
CUX1
Name
(RefSeq) cut like homeobox 1
KO
K09313
homeobox protein cut-like
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102572038 (CUX1)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
102572038 (CUX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
102572038
NCBI-ProteinID:
XP_019348825
LinkDB
All DBs
Position
Un
AA seq
1571 aa
AA seq
DB search
MVSPRDEWLLWVFPCVSLQATTLRWLLLCCCWRELDATATILANRQDESEQSRKKLIEQS
REFKKNTPEDLRKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLG
QQLQLKVQRMHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAE
NIALEKEQKLQNDFAEKERKLQETQMSTASKLEEAEQKVQSLQTALEKSQADLFDLKTKY
DEETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANKSLQLATQIQKAPDVEQ
AIEVLTRSSLEVELAAKEREIAQLVEDVQRLQGSLTKLRENSSSQISQLEQQLTAKNSTL
KQLEEKLKGQADYEEVKKELNILKSMEFAPTEGSGAQDASKPLEVLLLEKNRSLQSENAT
LRITNSDLSGSARRKGKDQPESQRPATLPASPPSQLLRNTGEQASNTNGTHQFSPTGLSQ
DFFSSTLASPGLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSTGPYSTNSIS
SQSPLQQTPDVNGMAPSPSQSESAGSISEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYV
LGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNL
NRLFQEVPKRRNGSEGNITTRIRTTESGSDEAIKSILEQAKRELQVQKTAEPAQPPSATS
SGNSDDAIRSILQQARREMEAQQAALEPALKTPPLSQADISILSPKLVSTPAMSSVSSYP
SLAMSLKKHSSVTDSSISALQNLSGLKKEPPETPVLELHGVTDPAQGMLRHVKNELGRGG
VWKDHWWNTVQHDRRNAALPEDTKAEEVSSGKEKVSNQARPDRSQLQGPSSSEYWKEWPN
AESPYSQSSELSMTGASRSETPQNSPLPSSPIVPLSKPSKPSVPPLTPEQYEIYMYQEVD
TIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQL
WLNGELGQCVLPAQGQQQGQVLHSVTSLQDSLQQGCASSESTPKTSASCSPAPESPMSSS
ESVKSLTELVQQPCPAIETSKDSKPQESSEPPASESQSTTPLPLSGHSALSIQELVAMSP
ELDTYGITKRVKEVLTDNNLAWLTSLKSSRRARKCAPNSALGQRLFGETILGLTQGSVSD
LLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQSC
ESSSVGIDYSQGASPQPQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNL
KTSTVINWFHNYRSRIRRELFIEEIQAGSQGQAGSSDSPSARSNRAVHSSEGDSCDGVDT
EGPPEGKQSGLEADEYNNATTKSQGGQAESTFEVGEEALQDVRSSEKTESFHLGMESLED
TDDEGRLKAPRQSSPPGSQSSGETLETMPNSATEEDASTSAASTSVLTGESSYKSKESSE
RISSVPSTSSTLATGSQKTNSIQSLFNFSEAASSKNTRDNTLRKKKAANLNNIIHRLEKA
ASREEPVEWEF
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atggtctctccacgagacgagtggctgttgtgggtatttccgtgtgtgtccttacaggct
acaacgcttcgctggctgttgctttgctgttgttggagagagcttgatgccacagcaaca
atattggctaaccgacaagatgaaagtgaacagtctagaaaaaagcttattgagcaaagc
cgtgagttcaagaaaaacactccagaggacctgcgcaaacaggtagctccattattgaag
agtttccagggggagattgatgcattgggaaaaagaagtaaagaagcagaggcagccttc
ttgaatgtctataagagattaattgatgttccagatccagttccagctctggatttagga
cagcagcttcagctgaaagtccagcgcatgcatgatattgaaacagaaaaccagaaactt
agggaaacgctagaagaatacaacaaggaatttgctgaagtgaaaaatcaagaggttaca
ataaaagcacttaaagagaaaatccgagaatatgaacagactctgaagaaccaagcagag
aatatagctcttgaaaaagaacaaaagttacaaaatgactttgcagagaaggagagaaag
ttgcaagagacacagatgtcgacagcctcaaagctggaggaggctgaacagaaagttcaa
tctttgcagacagctttggaaaaatcccaggcagacctttttgacctgaaaacaaaatac
gatgaagaaactactgcaaaggctgatgaaattgagatgatcatgacagaccttgaaaga
gcaaatcagagggcagaggtggcgcagagagaggcagagaccttaagggagcagctctca
tcagctaacaaatctctccaacttgctacacagatccagaaggcacctgatgtggagcag
gccatagaggtgctgacacgatccagcttggaggtggaactggctgctaaagaacgggaa
attgcccagcttgtagaagatgttcaacgactccagggcagcctcaccaaacttcgtgag
aactccagcagtcagatctcacagctggagcagcagctgactgccaagaacagcacactt
aaacaactggaagaaaaactgaaaggacaggctgattatgaagaagttaagaaagaatta
aatattttgaagtccatggagtttgcaccaaccgagggctctggtgcacaggatgcatca
aaaccactggaggtgttgctgctggagaagaaccgctcattgcagtctgagaatgccacg
ctgcgtatcactaatagtgacctgagtgggtcagccaggagaaaagggaaagaccagcct
gagagtcagcgtcctgcaaccttgccggcctcccctccttctcagttgctccgcaacacg
ggggagcaggcttccaatactaatggtacacaccagttctcaccaacgggtttaagtcaa
gactttttcagctcaaccttggcaagccccggcttacccctggcctccacgggaaaattt
gcactaaattctctcctccaacgacagctaatgcagtccttctactccaaggcaatgcag
gaagcaggaagcacaagcatgattttttcaacaggtccttacagcacaaactccatatct
tcccaaagtccattacaacaaactccagatgtaaatggtatggctccatctcccagccag
tcagaaagtgctgggagcatctctgaaggcgaggagatagacacagctgaaattgcacgt
caggtgaaagagcaattgatcaagcacaatattggacagcgaatatttggacattatgtc
ttgggactgtctcaagggtctgtgagcgagatactagccaggccaaagccgtggaataaa
ctgactgtgagaggcaaggagccgtttcacaagatgaagcaattcctctccgacgagcag
aacatcctggcactacgcagcatccagggtagacagagagagaatccaggccagaacctg
aacagactatttcaggaagtaccgaaacgaagaaatgggtctgaaggtaacatcacaaca
agaattcgaacgacagagagtggctctgacgaagccatcaaatccattctagaacaagcc
aaaagggagctgcaagtacagaaaacagctgagccggctcagccaccttctgcaactagc
agtgggaattctgatgatgccattcggtccattctgcagcaagcccgacgtgaaatggag
gcacagcaggctgccctcgaacctgccttaaaaacgccacctttgtctcaagctgacatt
tccattttgtcccctaaactggtatctacacctgcaatgtcttcagtttccagttaccct
tcgctggccatgtctctgaagaaacattcatctgttacggattctagtatctctgcattg
cagaacctctctgggctaaaaaaggagcccccagagacaccagttttagagcttcatgga
gtaactgatcctgcacaaggtatgctgaggcacgttaaaaatgaattgggacggggtggt
gtttggaaggaccattggtggaataccgttcagcatgacagaagaaatgcagctcttcct
gaagatacaaaagctgaggaagtcagcagtggaaaagaaaaggtcagcaaccaggctagg
ccagaccgtagtcagctccaaggaccatcttcttcagaatactggaaagagtggccaaat
gctgaatctccatactctcagagctctgaattgagcatgactggagcaagtcgcagcgag
acaccacaaaatagtcccctcccttcttcacctattgtacctttgtcaaagccatccaaa
ccctcagttcctccactgacgcctgagcagtatgagatttacatgtaccaggaagtggat
acaatagagctaactcgtcaggtcaaagaaaagctagcaaagaatggcatctgccaaagg
atctttggggaaaaggtattaggcttatctcaagggagtgtcagcgacatgctatctagg
ccaaagccatggagtaaattgacgcagaaaggccgagaaccatttattcgcatgcagctc
tggctgaatggtgagctgggacagtgcgtcctccctgcacaagggcaacagcaaggacaa
gtcctccactctgtgacatcgttgcaggattccctacagcagggatgtgcgagctcagaa
agcactccaaagacctctgccagttgcagtcctgctcctgaatctcctatgagttccagt
gaatcagtgaagagcctgactgaattggtacaacaaccctgtcctgctatagagaccagt
aaggatagcaaaccacaggaatcaagtgagccacctgcttctgaatcccagtctacaaca
cctttgcctctgtccggccattcagcactcagcattcaagaattggttgctatgtcacct
gaattggacacatatggcattacaaagagggtcaaagaagtgttaacagataacaacctt
gcgtggctgacaagcctaaaaagcagcagaagagccaggaaatgtgccccaaactctgca
ttaggtcagcgtttgtttggggagacaatcctagggctaacacaaggctcagtctcagac
cttctggctcgccctaagccctggcacaaactgagtttgaagggacgggagccctttgtc
cgcatgcagctatggttaaatgatcccaacaacgtggagaagttgatggatatgaaaaga
atggagaaaaaagcctacatgaaacgacggcacagctcagttagtgacagtcaatcgtgt
gaatcctcgtcggttggaatagactacagtcagggagccagcccacagccacagcatcag
ctaaagaaaccacgagtagtgttggcaccagaagagaaagaagctctaaagcgagcctat
cagcaaaagccatacccatcaccaaaaaccattgaggaactcgctacacagctcaacttg
aaaacgagcacagtgatcaactggttccataattacaggtctcgcatccgtcgagaactg
ttcattgaagaaatccaagcaggtagccagggccaggctggatcaagtgactctccttcg
gccaggagcaacagagcagttcatagctctgaaggagacagctgtgatggtgtggacaca
gaaggcccacccgaaggaaaacaaagtggtctggaggctgatgagtacaacaatgcaacc
acaaagtctcagggagggcaagcagagtcaacttttgaagtgggggaagaggcactgcaa
gatgtcagatcttcagagaaaacggagtcgttccatttgggaatggagagcctggaggat
actgatgatgagggcaggctcaaagcaccacgtcaaagttcaccaccaggatctcaaagt
tcaggagaaactctggagacaatgccaaactctgctacagaagaggatgcctctacctca
gctgcctccacctcagtccttacaggggagagctcctacaagtcaaaagaaagttcagag
agaatttccagtgtgccaagtacaagttccacattggctacaggctcacagaaaaccaac
tctattcagagcttattcaacttttccgaggcagcaagctccaagaacacacgagacaac
accttgaggaaaaagaaagcagcaaacttgaacaacataatccaccgtttagagaaggcc
gctagtcgagaagagcccgttgaatgggagttttga
DBGET
integrated database retrieval system
