Alligator mississippiensis (American alligator): 102572039
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Entry
102572039 CDS
T03087
Symbol
WDR43
Name
(RefSeq) WD repeat domain 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102572039 (WDR43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amj03009
]
102572039 (WDR43)
Ribosome biogenesis [BR:
amj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102572039 (WDR43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_THOC3
WD40_Prp19
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_ACSF4
Beta-prop_SPT8
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_WDR19_1st
EIF3I
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Methyltrans_Mon_3rd
WD40_like
UTP15_C
Beta-prop_DCAF4
Beta-prop_RIG_1st
DUF6235
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Saw1
Motif
Other DBs
NCBI-GeneID:
102572039
NCBI-ProteinID:
XP_014453632
LinkDB
All DBs
Position
Un
AA seq
657 aa
AA seq
DB search
MAAGEACSGGWGESARAPCAFSPCGRRLLALSGPDGRLRVWDAPSSRLHREYAPSARLSA
ACTCLAWAPPAVKEGPQRKKRKSEAVEAGEQLDLLAIGTAVGSILLYSTVKGDLQSKLDG
GHDNKINCIRWHQDNGCLYSCSEDKHIVEWNSQTCKVKCKWKGDNSSVSSLCISPDGKML
LSAGRTIKLWDLETKEVYRHFTGHATAVSSLMFTTVRPPNENQPFDGITGLYFLSGAVHD
RLLSVWQIRSDRKEKNAVMSFTVTDEPIFIDLTVSESKEEPVKLAVVCRDGQLHLFEHIL
NGYCKKPLTSNCAIQIATPGNDSDSTPKPVPILAAAFCSDKQSLMIVYGNTLQPIIERVS
LTTTESHVCLVRDIQKTLTLKMEMAVTKVKTPVVNSEAKVLVPGVPGHSAAIKPQSSGTK
KAKNKKKPGGKEASIEDRLGAMDIDAMKVKTQGGLPQTDSFAVLLVQGLESNDPDILNKV
LQTRKEALVKNTVARIPVHAVIPLLHELTKRLQGHPYSASQMVRWLKCIFTIHASYLSTL
PDLVPQLGMLYQLMESRVKTLQKLSRLHGKLYLLITQVAALEKIQDVSDVNQTAKLVYEE
ESSEEGSEDEMIADKDSDDNWEEDEEKEEQSEEQEMAVDKEINGDSDLDPENESEEE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggagaggcgtgtagtggcggctggggggagtccgcgcgggccccgtgcgcc
ttctcgccctgcggccgccgcctgctcgcgctgtccgggcccgacggccgcctccgcgtg
tgggacgcgcccagcagccgcctgcaccgcgagtatgcgccgtccgcccgcctcagcgcc
gcctgcacctgcctggcctgggccccgccggccgtcaaggaggggcctcaaaggaaaaaa
agaaaatctgaagctgtggaagcaggtgaacagttggatctgttggcgattggtacggca
gttggcagtattttgttatacagcacagtaaaaggagacttacagagcaaactagatggt
ggtcatgacaataaaataaactgtatacggtggcaccaggacaatggttgcttgtatagc
tgttctgaggacaaacacattgtggagtggaactcacaaacctgcaaagttaagtgcaaa
tggaaaggcgacaatagcagcgtcagttcactgtgcatcagtccagatgggaagatgtta
ctttcagctggtcgaactatcaaactgtgggacctggagaccaaagaagtctacagacat
ttcacaggccatgcaacagcagtttcatcactaatgttcacaacagtacgacctccaaat
gaaaatcaaccctttgatggaattactgggctgtatttcttgtctggagcagtgcatgac
cggttacttagtgtgtggcagatcaggtcagataggaaagaaaagaatgctgtaatgtct
ttcacagttacagacgaaccaattttcattgacctgacagtgtcagaaagcaaagaagag
ccagtgaagttagcagttgtatgcagagatggacagctgcatttatttgaacacatttta
aatgggtactgcaaaaagcccttaacatcaaactgcgctatccagatagccacacctgga
aatgacagtgactctacaccaaaaccagtccctatcctagcagctgcgttttgctcagac
aagcagtcattgatgattgtttatggaaacaccttacagcctattattgaaagagtgtcc
ttgaccaccactgaatcccatgtatgtttggtaagggacattcagaagacgttgacgctt
aaaatggaaatggctgtgacaaaggtaaaaacacctgttgtgaactcagaagccaaagtt
ctagtgcctggagtcccaggacacagcgcagccatcaaaccccagtcctctgggacgaag
aaggcaaaaaacaaaaagaaaccaggaggcaaagaggctagcattgaagaccgcctgggt
gcaatggatatcgatgcaatgaaagtaaaaacacaaggtggccttccacaaactgacagc
tttgcagtgcttttggttcagggtttggaaagcaatgatcctgacatcttaaataaagtg
ctacaaactaggaaggaagctttagtaaagaatacagtagccaggatacctgtacatgct
gtcattccactgctgcacgagcttacaaagagattgcaaggccacccgtacagtgcctca
caaatggttcgatggctaaagtgtatcttcactatacatgcatcctacctttccacattg
ccagacttggttcctcagctggggatgctgtaccagttaatggagagcagagtaaaaacc
ttgcagaagctctctcgcctccatggaaaactctatcttcttatcacccaggttgcagca
ctagaaaaaattcaggatgtaagtgatgttaatcagactgcaaagctggtatatgaggaa
gaatcttcagaggaaggctcggaagatgagatgattgctgataaagattcagatgacaac
tgggaagaagatgaagaaaaagaggaacaatcagaagaacaagaaatggctgttgataaa
gaaattaatggtgactctgatttggacccagaaaatgaaagtgaagaagaataa
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