Alligator mississippiensis (American alligator): 102572077
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Entry
102572077 CDS
T03087
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA processing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102572077 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amj03041
]
102572077 (PRPF38A)
Spliceosome [BR:
amj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
102572077 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
102572077 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
102572077
NCBI-ProteinID:
XP_006262290
UniProt:
A0A151M4G2
LinkDB
All DBs
Position
Un
AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHKERVCDIILPRLQKRYVLEEAEQLETR
VSALEEDMDDVESSEEEEEEDEKMERAPSPDHRRRGYRDLDKPRRSPTVRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccggacggtgaaggacgcgcacagcatccacggcaccaacccgcagtacctg
gtggaaaagatcatccgcacgcgcatctacgagtccaagtactggaaggaggaatgcttc
ggcctcaccgcggagctggtggtggacaaggccatggagctgaagtacgtcggtggcgtg
tacggggggaacatcaagcccacgcccttcctgtgcctgaccctgaagatgctgcagatc
cagcccgagaaggacatcatcgtggagttcatcaagaacgaagacttcaaatatgtcaga
atgcttggtgcgttatacatgagattgactggcactgccatcgactgctacaagtacctc
gagccactgtacaacgattatcggaaaataaagagtcaaaatagaaatggggaatttgaa
ctaatgcatgtggacgagtttattgatgaactgctccataaggaacgtgtttgtgatatc
attttacctcgattgcagaaacgttacgtcctggaagaagctgaacaactagagactcgg
gttagtgcattggaagaagatatggatgatgtagagtctagcgaggaggaagaagaggag
gatgaaaagatggagagggcaccctcccctgatcatcgcaggagaggctacagagatttg
gacaagccacgcagatctccaactgtgagatacaggaggagccgaagcaggtctccacgc
aggcgaagccgctcacccaagaggagaagcccgtcaccacgtcgggagaggcatcgcagc
aaaagcccaaggcgacaccggagcaggtctagggagagacgccacagatcaagatctaaa
tctccagggcaccatcgtagtcatagacacagaagtcattccaaatcacctgaaagatcg
aagaaaagccacaagaagagtcgacgagggaatgaataa
DBGET
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