KEGG   Alligator mississippiensis (American alligator): 102572222
Entry
102572222         CDS       T03087                                 
Symbol
CDC5L
Name
(RefSeq) cell division cycle 5 like
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102572222 (CDC5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amj03041]
    102572222 (CDC5L)
   03400 DNA repair and recombination proteins [BR:amj03400]
    102572222 (CDC5L)
Spliceosome [BR:amj03041]
 Complex B
  Other components
   Prp19 complex
    102572222 (CDC5L)
 Complex C
   Prp19-CDC5 complex
    102572222 (CDC5L)
DNA repair and recombination proteins [BR:amj03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    102572222 (CDC5L)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 102572222
NCBI-ProteinID: XP_006259437
UniProt: A0A151NCA0
LinkDB
Position
Un
AA seq 803 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEETADDP
RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIEIQKKRKKKRGVDYNAEIPFEKKPAPGFYDTSEENYQSLDADFR
KLRQQDLDGELRSEKEGRERKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDTELEEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSIALRTPKTPAAQD
RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSHGP
EGLTPRGGTTPKPAVGATPGRTPLRDKLNINPEEGMADYSDPSYTKQLERESREHLRVGL
LSLPAPKNDFEIVLPENAEKELEEHEVDETFVEDAADIDARKQAIRDAERVKELKRMHKA
VQKNLPRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHFDLLHHPYGEQPGAKK
GKGPGFGASSTEHMTYLEQSPYDKFSKDDLKKAQDLLAQEMEVVKQGMGHGELSSEAYNQ
VWEECYSQVLYLPGQNRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKLKI
LLGGYQSRAMGLIKQLNDLWDQIEQAHLELRTFEELKKHEDAAIPRRLECLKEDVQRQQE
REKELQQRFADFMLDKETFQSKY
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgccgcggattatgattaaaggcggggtgtggaggaacaccgaggatgaaattcttaaa
gcagctgtaatgaaatatggcaaaaaccagtggtctcggattgcttctttgttgcataga
aagtcagcaaaacagtgcaaagccagatggtacgagtggctggacccaagcatcaaaaag
actgagtggtcccgggaagaggaggagaaactgttacatttagccaagctaatgccaacc
cagtggaggaccatcgccccaatcattggaagaacagctgcacaatgcttggaacactat
gaatttctgctggacaaagctgctcagagagataatgaggaagaaactgcagatgatcct
cgaaaacttaaacctggagaaattgatccaaatccagagaccaaaccagcccggccagac
cccattgatatggatgaagatgagcttgaaatgctgtcagaagctagagctcgtctggct
aatactcagggaaagaaagccaagcggaaagcaagagagaagcagctggaagaagctaga
cgccttgcggctctccagaagagacgggaattgcgagctgcagggattgagatccagaag
aaaagaaaaaagaaaagaggtgtggattataatgcagaaatcccatttgaaaagaagcct
gcgcccggtttttatgatacgtcagaggaaaattaccagtcgctggatgcagacttcagg
aagctacgtcagcaagaccttgatggggaactaagatctgagaaggaaggacgagaacgc
aaaaaggacaaacaacatctgaaacggaaaaaagaatctgatttgccatcagctatcctt
caaaccagtggagtgtcagagttcactaaaaaaagaagcaaactggttcttccagctcct
cagatttcagatacagagctggaagaagtagtaaaagttggccaggcaagtgagatcgcc
cgtcagacagccgaggagtctggaattacaaactccgcttccagtacccttttatctgaa
tataatgtcacgaataacagcatcgcccttcgaacacccaaaaccccagctgcacaggac
aggatcctgcaggaagcccagaacttgatggccctaaccaacgtagacacccccctgaaa
ggtggtctgaatactcccctccacgagagtgacttctctggggtgacaccccaaagacaa
gttgttcagactccaaatacagtgctttcaacacccttcaggactccttctcatggacca
gaaggtttaacccctcgtgggggaacaactcctaaaccagcagttggagcaacaccaggt
agaactcccctgcgagacaagttaaacatcaatccagaggaaggaatggcagattacagt
gacccatcttatacaaagcagctggagagggagtctcgtgagcatcttcgtgtaggcctt
ctgtctcttcctgccccaaagaatgactttgagattgtattaccagaaaatgcagaaaaa
gagcttgaggaacatgaagtagatgagacctttgtggaagatgctgctgatattgatgct
cgcaaacaggctattagagatgcagaacgtgtaaaggagctgaagcgcatgcacaaagct
gttcagaagaatttgccaaggccttcggaagttaatgaaacaatcctgagacccttgaat
gtagaacctcctctgacagacctgcagaagagtgaagaactgataaagaaagagatgatc
accatgcttcattttgatcttctgcatcacccatatggagagcagcctggggctaagaag
gggaaaggcccaggatttggagccagcagcacagagcatatgacttatctggaacaaagt
ccttatgataagttctccaaagatgacctcaaaaaggctcaagacctattggcccaagag
atggaggtggtaaagcaaggaatggggcatggagagctctcaagtgaagcttataaccag
gtgtgggaagaatgttacagccaggtgttatacctacccggacagaaccgatacacccga
gcaaacttggccagcaaaaaagacagaatagagtctcttgaaaagaggcttgagataaat
agaggtcacatgacgacagaagcaaagagggctgccaaaatggaaaagaagctgaagatt
ttgcttggtggttaccaatctcgggcaatgggtctcatcaaacagttaaatgatttgtgg
gaccaaattgaacaggctcacctggagcttcgcacctttgaagagctaaagaagcatgaa
gatgctgctattcccaggagattggagtgtctgaaggaagatgtgcagcgccagcaggag
cgggagaaggagctccagcagcgatttgcagacttcatgctggataaagaaactttccag
tcaaaatactga

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