Alligator mississippiensis (American alligator): 102572247
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Entry
102572247 CDS
T03087
Symbol
ERCC2
Name
(RefSeq) ERCC excision repair 2, TFIIH core complex helicase subunit
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03022
Basal transcription factors
amj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102572247 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
102572247 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amj03021
]
102572247 (ERCC2)
03036 Chromosome and associated proteins [BR:
amj03036
]
102572247 (ERCC2)
03400 DNA repair and recombination proteins [BR:
amj03400
]
102572247 (ERCC2)
Enzymes [BR:
amj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102572247 (ERCC2)
Transcription machinery [BR:
amj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102572247 (ERCC2)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102572247 (ERCC2)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102572247 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
SesA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
102572247
NCBI-ProteinID:
XP_014460246
LinkDB
All DBs
Position
Un
AA seq
737 aa
AA seq
DB search
MLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQRAHPLDVTKLIYCSRTVPEIEKVV
EELRKLLDFYEKQTGEKLPFLGLALSSRKNLCVHPEVSLLRFGKEVDGKCLSLTASYVRA
QHQRDGTTPTCRFYEEFDVHGRQTPLPYGVYNLDDLKGFGRQKGWCPYFLARYSILHANI
VVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCIDSMGVNITRRTLDRCQANMT
TLQSTIHRIKETDAQKLRDEYRRLVEGLREASVARETDVYLANPVLPDEILQAEAVPGTI
RTAEHFVGFLRRLLEYLKARLRAQHVVQESPPAFLKDMHEKVCIERKPLRFCAERLRSLL
RTLEIVDVADFSPLTLIANFATLVSTYSKGFTILIEPFDDRTPTITNPVLHFSCMDASIA
IKPVFERFQSVIITSGTLSPLDIYPKILDFRPVTMATFTMTLARTCLCPMIVGRGNDQVA
ISSKFETREDIAVIRNYGNLLLELSAIVPDGIVAFFTSYQYMENIVASWYEQGILENIQR
NKLIFIETQDGAETSMALEKYQEACENGRGAILLSVARGKVSEGIDFVHHYGRAVIMFGV
PYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKR
YARADKRGKLPRWIQEHITDANLNLTVDEAVQVAKYFLRQMAQPFHKEDQLGLSLLTLEQ
LQSEETLRRVEEIAHQA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgctggagctcaagcgcacgctggacgccaagggccacggcgtgctggagatgccctcg
ggcaccggaaagaccatctcgctcctgtcgctcatcgtggcctatcagcgggcgcacccg
ctggacgtgaccaagctgatctactgctcccgcacggtgcccgagatcgagaaggtggtc
gaggagctgcggaagctgctggatttctacgagaagcagacgggggagaagctgccgttc
ctgggcctggcgctgagctccaggaagaacctgtgcgtccacccggaggtgagcttgctg
cgcttcgggaaggaagtggatggcaagtgcctgagcctgacggcgtcgtacgtgcgggcg
cagcatcagcgggatggcaccacgcccacctgccgcttctacgaggagtttgatgtgcac
gggcgccagacaccgctgccctacggtgtctacaacctggatgacctcaagggcttcggg
cggcagaagggctggtgcccctacttccttgcccgctactcgatcctccatgccaacatc
gtggtgtacagctaccactacctgctggaccccaagattgctgacctggtctccaaggag
ctggccaagaagtctgtggtcgtctttgatgaggcccataacatcgacaacgtttgcatt
gattccatgggtgtgaacatcacgcgccgcacgctggaccggtgccaggccaacatgacc
acactccagagcactatccacaggatcaaggagacggatgcacagaagctgcgggatgag
taccggcgcctggtggaggggctcagggaagccagcgttgcccgcgagactgatgtctac
ctggccaatcccgtgctgcccgacgagattctccaggcagaggcggtgcctgggaccatc
cggacagcggagcacttcgtgggcttcctgcggcgtctcctggagtacctgaaggcacgg
ctgcgggcgcagcacgtggtgcaggagagcccccctgcttttctcaaggacatgcacgag
aaagtctgcatcgagcgcaagcctctccggttctgtgcggagcggctgcgctccctgctg
cgcaccctggagatcgtggatgttgccgacttctcgcccctcacactcatcgccaacttc
gccacccttgtcagcacctactccaagggcttcaccattcttattgagccctttgatgac
cggacacccaccatcaccaaccccgtgttgcacttcagctgcatggatgcctccattgcc
atcaagcctgtcttcgagcgcttccagtcagtcatcatcacctcggggacactgtctcca
ctggacatctaccccaagatcctggatttccgccctgtcaccatggcaacctttaccatg
acgctggccaggacctgtctctgccccatgatcgtggggcgtggcaacgaccaagtggcc
atcagttccaagtttgagacccgtgaagacatcgccgtcatccgcaactatggcaatctg
ctgctggagctatcggccatcgtgcccgacggcattgtggccttcttcactagctaccag
tacatggagaacatcgtggcctcgtggtacgagcagggcatcctagagaacatccagcgg
aacaagctgattttcattgagacgcaggacggggccgagaccagcatggcgctggagaag
taccaggaggcctgcgagaatggacgcggggccatcctgctttctgtggccaggggcaag
gtgtctgagggtatcgactttgtgcaccactacggccgtgccgttatcatgtttggggtg
ccctacgtctacacccagagccgcatcctcaaggcacggctagaatacctgcgggaccag
ttccagatacgggaaaatgacttcctgaccttcgatgccatgcggcatgcagcccagtgt
gtgggccgggctatccgcggcaagaccgactacggcctcatggtctttgctgacaagcgc
tacgcccgggccgacaagcgggggaagctgccacgctggatccaggagcacatcaccgat
gccaacctcaacctaacagtggatgaggccgtgcaggtggccaagtacttcctgcgccag
atggcccagccctttcataaggaggaccagctcggcctgtccctgctgacactggagcag
ctgcagtctgaggagactctgcgccgtgtcgaggagatcgcgcaccaggcctga
DBGET
integrated database retrieval system
