Alligator mississippiensis (American alligator): 102572465
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Entry
102572465 CDS
T03087
Symbol
TRIM55
Name
(RefSeq) tripartite motif containing 55
KO
K10654
tripartite motif-containing protein 55
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102572465 (TRIM55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102572465 (TRIM55)
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102572465 (TRIM55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-B_box
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-RING_6
Sina_RING
Fry_C
UvrD_C
Motif
Other DBs
NCBI-GeneID:
102572465
NCBI-ProteinID:
XP_006262043
LinkDB
All DBs
Position
Un
AA seq
528 aa
AA seq
DB search
MSTSLNYKSFSKEQQTMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCASDIFQASNP
YLTTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPERKSE
QPMCEEHEDEKINIYCLNCEMPTCSLCKVFGAHKDCQVAPLTNVYQRQKTELSDGIAVLV
GSNDRVQGIVSQLEEACRTLEDCCRRQKEQLCEKFDYLYSVLEERKNEMTQIITRSQEEK
LEHVRSLMKKYADHLEAVSKLVESGIQFMEEPEMAVFLQNAKTLLQKITEASKAFQMEKI
VPDYENMSHFTVNLTREEKIIREIDFYREEDGDEEDEELGEGEEFDEVRTESSGEEEGVA
ENISQHPQLDAEPKSTLGGPQAPPDPSFTPAASVNEDQVVPGGSQQTAESDIQVPSTAET
ADPFLYPSWYKAQSRQASTPNATQIHEGLSKVGPSASLEMNVKKADATEAATTNENAPGS
GKETTATSETGSELSPQGQASRAPATSERVDEPARHVFSFPWLNSLKE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctctttgaattacaagtccttttccaaagagcagcaaaccatggataacctg
gagaaacagcttatttgccccatctgtttagagatgttttctaagcctgtggtcatcctt
ccctgtcagcataacctgtgtagaaaatgcgccagcgatattttccaggcctccaatcca
tacctcacaaccagaggaggcaccacagtggcttcaggtggtcgatttcgatgtccctca
tgtagacatgaagtagttctggacagacatggtgtgtatggacttcaaaggaaccttctg
gtggaaaatatcattgacatttataagcaggagtctaccagacctgaaagaaaatctgaa
cagccaatgtgtgaagagcatgaagatgagaaaattaatatctattgtttaaactgtgaa
atgcctacatgctctctgtgcaaagtttttggtgctcataaagactgtcaagtagctcct
ctcacaaacgtttaccaacgacaaaagactgaactcagtgatggcattgcagtgttagta
ggaagcaacgacagagtacaaggaatagttagtcagctggaagaggcctgcaggacactc
gaggattgctgcagaagacagaaggagcaactgtgtgaaaaatttgattatctgtattca
gtactggaagaaagaaaaaatgaaatgacacaaataatcactagaagccaagaggagaag
ttggaacatgtccgttccttaatgaaaaagtatgcagaccacttggaggctgtgtcaaag
cttgttgaatcaggaatccagttcatggaagaaccagaaatggctgtgtttttgcagaat
gccaaaacgttgcttcaaaaaattactgaagcatcaaaagcatttcaaatggaaaaaata
gtgcctgactatgaaaatatgagccatttcactgtaaacctaactagagaagaaaagatt
ataagagaaatcgacttttacagagaggaggatggggatgaggaagatgaggagctcggg
gaaggtgaagagtttgatgaagtccgcacagagtcatctggggaggaagaaggggtagct
gagaatatatcccagcaccctcagctggatgcagaacccaagagcacactaggcggacct
caggctccaccagacccatcctttacaccagctgcttctgttaatgaggatcaggttgtg
ccaggtggttctcagcagactgcagagtctgatattcaagtgccatcaacagcagaaact
gccgaccctttcctttaccctagttggtataaggcccaatcacggcaagcaagcacccca
aatgcaacccaaatacatgagggattgagtaaagtagggccttctgcttctctggaaatg
aatgtaaagaaggcagacgctacagaagcagcaacaaccaatgagaatgcacctgggagt
ggtaaggaaactacagcaacttctgagactgggtctgaattatccccacaaggacaagcg
agcagagctccagcaaccagtgaaagagttgatgagccggctcgtcatgtcttctctttc
ccctggttaaactcattgaaggaatga
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