KEGG   Alligator mississippiensis (American alligator): 102572470
Entry
102572470         CDS       T03087                                 
Symbol
WDR90
Name
(RefSeq) WD repeat domain 90
  KO
K24759  WD repeat-containing protein 90
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:amj03037]
    102572470 (WDR90)
Cilium and associated proteins [BR:amj03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   102572470 (WDR90)
SSDB
Motif
Pfam: WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd WD40_CDC20-Fz Beta-prop_EML WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 WD40_MABP1-WDR62_1st EIF3I CFA20_dom Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_RSE1_2nd DUF7165 Beta-prop_NWD2_C Beta-prop_SCAP B-prop_COPA_B_2nd WD_LRWD1
Other DBs
NCBI-GeneID: 102572470
NCBI-ProteinID: XP_006262948
LinkDB
Position
Un
AA seq 1863 aa
MAKAWQHPYLNVFKHFRVEEWKRSTKEGDVTTFMDKTLKGTVYRIRGSVPASNYIQLPKT
STQSLGLTGRYFYLLLRPMPNKYFVVHLDVTTEDSHVVRISFSNLFKEFKSTATWLQFPF
ICGAAKGSVYESTGKTSKRDLVGVAPANVRWTFLMLDLHYILSMYLNRCYSHLKSVKLCS
NLLVKNLYTSDLLFDPGVTFSEARQAKQTFHGISPVPREMAFPVPKGESWHDHYDYIRFP
SDGSKLPYDSIQKSCSRPAAGGRVLEDPARELPRPVTLTKAVRDRLSLIQQITSPKDMPH
RSPVLTESIPEVHLTSCRPLEAMNAGASEVNGRRGQQAAGDSTVQSYAMSDGGIHVYAHK
MGDITIHTVDTGSEESVYMKVTAPEEFSRRSMTHCRRLLPDPILKLRTIIGFGGYSTKWA
LWTQNNSAVVYPCHAIIVTMQIGTGEQRFFIGHTDKVSALAFNGNSTMLASAQIGHLTMV
RLWDFHKGKCLSMFKTHVNSVSSLSFSHGGSILCGIGKDGHGKTMVVVWNTAQVNHGGEV
VVLAKAHTDVDIQTLKIAFFDDTRMVSCGRDNVRLWRVRNGTLRSCPVNLGEYHSLEFTD
LAFEEGHSPEREPEDRTLFVCSRSGHILEIDYKKVSIRNARRLLPSQTQHSHRREKQTFN
SGPGIAINSISVSPTFCATGSEDGYLRLWPLDFSAVFLEAEHEGPVSTVSISPDNLRVLC
TTSTGNLGYLDIQSRNYSTLMRSHTNSILAFSVERLRKQMATVSQDNTIRIWDLVSMQQM
YDFTASDEMPCAVAFHPLQQVFACGFSSGMVRTFSLAASDLLMEHKQHRGAITGLTFSPD
GNFMFSSCSQGTLALYNCATKKSHILRVLGNVVSQDADYSPNALALSGDGHLLAFVGPSK
YTVTVMDACNLDELLKIDISILDLDSTSLDSAMRVCFSPVPVGQLLVSTASNKVLVLDCK
TGRLVREVSHVHKQYCSSLALSEDGRYMLTAGDRVIKVWDYRMSFNINFQVYIGHSEPVQ
QVAFTPDQRHVISVGDAIFLWDFLALPAEQLPKNDVHLSESILPPQAENSPEKPKSLLSG
VNEIPRQSAPLPSRAPPPCLDISSVHHRGCHDIFSESDEEVEADLQGSSRRVANGDRNHS
ALIMEEPVKSEEPIVVRSKVSQECSRSPSHTGNELRKETKVPEPQDYIRPDSYRHFTARF
KASVLPKTFSSPPAGNEVLKLKAVVGYNGNGRGNMLWNPDTGLFAYTCGSVIVVEDLHSG
SQQHWLGHPEEISTLAVSHDAQVLASGSGQGNGDSRCQIRIWNVQEGTCQKVLFHHETQV
QAMAYSWDDRFLVTLGDYNDRTIALWSTHTLDLMTSTRFSEPVHDVAFNPLSSGELSCVG
RGAVTFWLMEQCGADISLKVHRAPIPDMVGPVELTSLCYSTNYLLYTGTNTGQICVWDTE
TNRCFMTWEADEGEIGVLVCHGNKLVSGSNTKRIRLWSVASVQELRLKGSGARSSSVLLE
HEMTLDGTIVSATFDDSLEMGIVGTTAGTLWYINWVDNTSIRLISGHKNKVNEVTFSPGE
SHCATCGEDGSVRVWCVASMELVVQFQVLNQSCQCLAWSPTSISRGGDENQHVVAGYSDG
TLRVFSISRTEMELKMHPHAVALTAVAYSADGEIILSGSRDGLIAVSSPRTGMTIRLLTD
HKGSPISVIQCTGKQYHDFGVEGCELWLAASSDRRVSIWVSDWLKDKCELIDWLSFPAPT
SPEVPGNLPPSLAAFCPWDKGTVVYVGFGLQKEVLFYSLCQKQVVEKIPLSHFATSLSLS
PAGHLLTVGFNERLLRLIDCTTRTEQDFAGHDDSVHLCRFTPSGKRLFTASYNEILVWEI
MNR
NT seq 5592 nt   +upstreamnt  +downstreamnt
atggccaaagcctggcagcacccgtatctcaacgtgttcaagcacttcagggtggaggag
tggaagcggtcaacgaaagaaggagatgtgacgaccttcatggacaagacgctgaaggga
acagtgtatcgtatccgagggtccgttcctgccagtaactacattcagctgcctaagacc
agcacgcagtcgttggggctcactggtcgttacttttatctgctcctcaggcccatgccc
aacaagtattttgttgtgcacctggatgtcaccacagaggatagccacgtcgtccgcatc
tccttctccaacctttttaaggagttcaaatcgacagctacatggcttcagtttccgttc
atctgtggagcagccaaaggatcagtgtatgagagtactggcaagacttccaagcgagat
ctggtaggggtggccccagcaaacgttcgctggacttttctgatgcttgaccttcactac
atcctctccatgtacttgaatcgatgctacagccatctgaagagtgtcaaactctgctcc
aacctgctggtgaagaacctctataccagtgacctgctctttgacccaggggtgaccttc
tcagaggcccgacaagccaaacagacattccatggcatctcccctgtaccacgagaaatg
gcctttcctgtgccaaagggagagagctggcatgaccactatgactatattaggtttccc
tctgatggctccaagctgccatatgactcaattcaaaagagttgttccaggcctgcagca
ggtggtcgagtgctagaagacccagcccgtgagctcccccggccagtgacactcaccaaa
gctgtccgtgatagactgtccctcattcagcagataaccagtcccaaggatatgcctcat
cggtcacctgtgcttacagagagcattcccgaggttcatttaacatcctgcagacctcta
gaagcaatgaatgctggggcttcagaggtaaacgggagaagaggacaacaggctgctgga
gactcaactgtgcagtcatatgcaatgagcgatggtggtattcacgtttatgctcacaaa
atgggcgacatcaccatccatactgttgacactggctcagaggagagcgtgtacatgaag
gttactgcacctgaggagttctccaggaggagcatgactcattgcaggagactcttgcca
gatccaatcctgaagctgaggacaattattggctttggaggttacagcaccaaatgggct
ctgtggactcagaacaattctgcagtggtctacccgtgtcatgctattatagtaaccatg
cagattggtacaggggagcaaaggttcttcattggacatacagacaaggtatcggcatta
gcattcaatggaaacagcacaatgctggcttctgcacagatagggcacttgaccatggtg
cgactctgggactttcacaagggaaaatgcctctccatgtttaaaacccatgtgaactca
gtctcatccctcagcttttctcatggcggatctattctctgcggcattgggaaggacggg
catggcaaaacgatggtggtggtgtggaacactgcccaggtgaaccatggtggagaggtg
gtcgtgctggccaaggcacacactgatgtggacatccagactttgaaaattgctttcttt
gatgataccaggatggtgtcatgcggcagagacaatgtgaggctgtggcgagtgcggaat
ggaacactgcggtcgtgcccagtgaatctgggggagtaccattccctggagttcactgat
ctggccttcgaggagggacattcacctgagcgggagccggaggatcggactctctttgtg
tgcagcagaagtggtcacattttggaaattgactataagaaagttagtatcagaaacgcc
aggcgcctcctgccatctcagacccagcactctcaccgtcgggagaagcagaccttcaat
tcagggcctgggattgcaataaacagcattagtgtgtccccaaccttctgtgctacgggc
tcagaagatggctatctgcgtctgtggccgttggatttttcagcagtcttcttggaggca
gagcatgaaggtccagtgagtactgttagcatcagtccagacaatctcagagttttgtgc
actacttccactgggaacctgggctacctagatatacagtcccggaactacagcacgctc
atgcgctctcacaccaactctattttggcattctctgtggagagactccggaagcagatg
gctacagtgtcccaggataacaccattcgcatctgggacctagtgtctatgcagcagatg
tatgacttcactgcctccgatgagatgccatgtgctgtggcctttcaccctttacaacag
gtctttgcctgtgggttcagcagtggaatggtgagaaccttcagcttggctgcctccgac
ctgctaatggaacacaagcagcaccgtggtgcaatcactggtctgaccttctctccagat
ggcaatttcatgttcagttcctgctcacaggggactctggctctttataactgtgccaca
aaaaaaagccacattctaagagtcctgggcaatgtagtgtcccaagatgctgactacagc
cctaatgccttggcactgagtggagatggacatctcttagcctttgtgggtccgtccaag
tacactgtgactgtcatggatgcctgtaatctagatgagctactgaagatagacatcagt
atcctagacttagacagcacaagcctggactctgctatgagagtctgcttttctcctgtg
cctgttggccagctcttggtgtccactgcctccaacaaagttcttgtgctcgactgtaaa
acaggacggttggttcgagaggtgtctcatgtgcataaacagtactgttcttcactggcg
ctgagtgaggatggcaggtacatgctgactgctggtgacagagttatcaaagtgtgggac
tatcggatgagtttcaatatcaacttccaggtgtatataggccattcagagccagttcaa
caagtggccttcacccctgaccaacggcatgtaatcagtgttggagatgccatctttctt
tgggacttcctagctctgcctgctgagcagttgcccaagaatgatgttcacctctctgag
tccattctgcctccccaggctgaaaacagccctgagaagccaaagagtttgctttctggg
gtcaacgagataccccgccagtcagctcctcttccatcccgagcaccacctccatgttta
gatatcagctcagtccaccacaggggatgtcatgatattttctctgagtcagatgaagaa
gtggaagcagatcttcaaggcagtagcagaagagtagcaaatggagacagaaaccactcg
gccctcatcatggaggaaccagtcaagagtgaggagcctattgttgtgaggtccaaagtg
agtcaggagtgttcaaggtctcccagtcacaccggaaatgagctcagaaaagaaaccaaa
gttcctgaaccccaggactatatccgccctgactcctacaggcactttactgctcgcttc
aaagcatctgtgctccccaagactttctcatctcctccagctggtaacgaggtcctgaaa
ctgaaggcagtggttggctacaatggaaatggcagggggaatatgctctggaacccagac
acaggcttattcgcctatacctgcgggtctgtgattgtggttgaagacctgcactcagga
tcgcagcagcactggcttggccatccagaggagatctctactttagcagttagccatgat
gcccaggttctcgcttctggctctggtcagggaaatggagattctcgctgtcaaatccgt
atctggaatgtacaagaggggacttgccaaaaagttctcttccaccacgagacgcaagtg
caggccatggcatactcttgggatgataggttccttgttacactaggagactacaatgac
cgaactattgccctatggagcacccatactcttgacctaatgacatccacccgtttctca
gaaccagtccatgatgtagcctttaaccctctttcttctggtgagctttcctgtgtagga
aggggagcagtgactttctggctaatggaacagtgtggagctgacatcagtcttaaggtt
catagagcacccatccctgacatggtaggaccagtggaactgacgtccctctgctacagc
actaactatcttctctatactgggaccaacacaggccagatctgtgtgtgggacactgag
acaaatcgttgcttcatgacttgggaggctgatgagggtgagattggtgtcctggtgtgc
catggcaacaagctggttagtggcagcaacactaagagaatccgactatggtcagtggca
tcggtgcaggagctgaggctgaaaggctctggtgctaggtctagctcagtccttttggaa
catgagatgaccctagatggaacaatagttagtgcaacctttgatgattctctggaaatg
ggaattgtgggcaccactgcaggaacattgtggtacatcaactgggtggataacacaagc
atccgactaatcagtggacacaagaacaaggtaaatgaagtgacattcagtcccggtgag
tctcactgtgccacctgtggtgaggacggcagtgtgagggtttggtgtgtggccagcatg
gagctggtggtacaatttcaagtgctgaaccagagctgccagtgtctggcttggagccct
acctctatctcccgtggtggggatgagaatcagcatgttgtggcagggtacagcgatggc
accctccgtgtgttcagcatttcaaggacagaaatggagttgaaaatgcacccccatgct
gttgcactgactgcagttgcctactctgcagatggagaaatcatcttatctggaagcagg
gatgggctaatagctgtcagcagccctcggactggaatgaccattcgtctccttactgac
cacaaaggatcccccatctccgttattcagtgcacagggaaacagtaccatgactttggg
gtggaaggttgtgaactctggttggctgcaagctcagatcgacgtgtcagcatctgggtc
tctgactggctaaaggataaatgtgagctcattgactggctaagtttcccagccccaaca
agccctgaggttcctggcaaccttcctcctagcctggcagcattctgcccttgggacaaa
gggactgtggtctacgtgggctttgggctgcagaaggaggtcctcttttacagtctgtgc
cagaaacaggtcgttgagaagatccccttatcacactttgccacttcactgagcctgtct
cctgcaggccacttgctgactgttggcttcaatgagcgcctgctgcgactgattgactgc
acaaccagaacagaacaagactttgcagggcatgatgactctgttcacctctgcagattc
accccttcaggcaaacgccttttcacagcttcctacaatgagattctggtgtgggagata
atgaacagatga

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