Alligator mississippiensis (American alligator): 102572540
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Entry
102572540 CDS
T03087
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102572540 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amj04990
]
102572540 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
amj04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
102572540 (PDLIM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
YusW
Motif
Other DBs
NCBI-GeneID:
102572540
NCBI-ProteinID:
XP_006264024
UniProt:
A0A151MSU1
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All DBs
Position
Un
AA seq
329 aa
AA seq
DB search
MSTHRVSLQGPGPWGFRLVGGKDFEQPLTVSRVTPGSKAAIASLCIGDVIMAIDGVNTDN
MTHLEAQNKIKACIDEINLTVGRSESKIWSPLVTEEGKTNPYKMNLASQPQEIRHIGSAH
NRSAMPFTAATASGTAPKVITAQYNNPACLYSSENIQTFNNAVESKSAGGVQDPSKTLEQ
PHQPSSNIVIDKESEVYKMLQENQEANEPPRQSASFLVLQEILESEETGDASKPSGFRSV
KPPTTKVASSIGNAQKLPVCDKCGSGIVGVFVKLRDKHRHPECYVCSDCGTNLKHKGHFF
VEDCIYCEKHARERVTPPEGYEVVTVFPK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcaccgcgtctccctgcagggcccggggccgtggggcttccgcctggtgggg
ggcaaggacttcgagcagccgctcaccgtgtcccgggtgactccgggaagcaaagctgca
atagccagtttatgcataggagacgtcatcatggcaattgatggagtgaacacagacaat
atgacacacttagaagcacagaacaaaattaaggcctgcatagatgagataaatctgaca
gttggaagaagtgaatccaaaatctggtcacctcttgtgacagaggagggaaaaaccaat
ccatataaaatgaatctggcctctcagccccaggaaataaggcacataggaagtgcgcac
aaccggagtgctatgccattcactgctgccacagcttcaggcactgcacccaaagtgatc
actgctcagtacaacaatccagcatgcctgtactcctcagaaaacatccagaccttcaac
aatgctgtggagtctaagtcagcggggggtgtacaggaccccagtaaaaccttagagcaa
cctcatcagccatcaagtaacattgtcatagacaaggagtcagaggtgtataagatgctg
caggagaaccaagaggcaaatgagccacccagacaatctgcttccttcctggtattgcaa
gaaattttggaatctgaagagacaggagacgcaagtaaaccttctggctttagaagcgtg
aaaccccccacaaccaaagtggcctcctccattgggaatgcccagaagttgcccgtatgt
gacaagtgtggatctggcattgtgggcgtgtttgtgaagctccgggacaagcaccgtcac
ccggagtgctacgtgtgcagcgactgtgggacaaacctcaagcacaaaggacacttcttt
gtggaagattgcatctactgcgagaagcatgcccgggagcgggtgactccccctgagggc
tatgaagtggtcaccgtcttcccaaagtga
DBGET
integrated database retrieval system
