Alligator mississippiensis (American alligator): 102572588
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Entry
102572588 CDS
T03087
Symbol
PASD1
Name
(RefSeq) PAS domain containing repressor 1
KO
K09026
neuronal PAS domain-containing protein 2
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102572588 (PASD1)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
102572588 (PASD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
bHLH_IRO3
TED_2
Phage_gp49
Diguanyl_cycl_sensor
DUF6863
Motif
Other DBs
NCBI-GeneID:
102572588
NCBI-ProteinID:
XP_019348358
LinkDB
All DBs
Position
Un
AA seq
700 aa
AA seq
DB search
MSNKAKLCQLFCRRFLKVACFWLIPRTLCCANELMDEDEKDRAKRASRNKSEKKRRDQFN
VLIKELCTMLQGHGHPLKMDKSTILQRTIDFLQKQKEITAQTEACEIRQDWKPSFLSNEE
FTQLMLEALDGFLIALTTDGIIIYVSDSVSSLLGHVPSDLVDQNILNFLPEREQSDVYKL
LSSHVLMTDPVATDFLHAEKQIEFCCHLARGSLDPNEPLTYEYVKFVVDFKYFTHVPTPA
CNGFESAIARAFRSATEEQICLVATVRLVTPQFLKELCNTEEPCEEFTSRHSLEWKFLSL
DHRAPPIIGYLPFEVLGTSGYDYYHADDLELLARCHEHLMQFGKGKSCYYRFLTKGQQWI
WLQTHYYITYHQWNSKPEFIVCTHLVVSYAEVRAQRRRDLGLEESSIELASSSLKSHKSY
VDIRQCGNSQETSRERVSVSSHSSRRSSHTALSDSASTSSMRHTDASTPTRQSVSLGQPE
KTSLRLASTGSTQAIVTPQAPAEHLTQHPMAQPAMPAQQAAMPAQQAAMPVYHFPAQLGM
MHQLKEQLEERTRILQADIKTQQEELHVIKEQLQLVQDSNLQMLMQQPMPLVFNNAQQPS
PRRAAQQQQTGAARQAVAKKPQQQGPGGSKRYCSSHLPSPRHFLREPCVTSSQVATSLGF
SLAAVIVTHLVQGQRHPQGSSCRHLWSCTRQEASASSSST
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataaggcaaaactctgtcaactcttctgcaggagatttctgaaggttgcgtgc
ttctggctgatcccgagaaccctgtgttgtgcaaacgagctgatggacgaagatgagaag
gacagggcaaagagggcgtcacgcaacaaatctgaaaagaaaaggagagaccagttcaat
gtcctcattaaagagctctgcacgatgctgcagggccacggccaccctctcaagatggac
aagtccacgatactgcagcggaccatcgacttcttgcagaaacagaaagaaatcacagca
cagacagaggcctgtgagatcagacaggactggaagccttcatttcttagcaatgaggag
ttcacccagttgatgttagaggctttagacggattcctcattgcacttaccactgatggg
attattatttatgtatctgatagtgtctcttcccttcttgggcatgtaccgtcagatttg
gtggaccaaaatatattaaactttctgcctgagcgggaacagagcgacgtatacaagctc
ctttcatcccacgtgctcatgacggatcccgtagcaactgactttctccacgctgaaaaa
caaatagagttctgctgccatttagcaagaggcagcttagatccaaacgagcccctcacg
tacgaatatgtgaaatttgtagtggattttaaatattttactcacgtgcctacgcccgcc
tgtaatggctttgagtcagctattgcacgagcattcaggtcagctacggaggagcagatt
tgcctcgtcgcgactgttcgtctcgtcaccccgcagttcttaaaggagctctgcaacacc
gaagagccgtgtgaagaattcacatcaagacatagcctggagtggaaatttttatccttg
gaccatagggctccacctattataggctacttaccttttgaggtcctgggaacatcgggt
tatgattattaccacgccgatgacctggagctgcttgctaggtgccatgaacacttgatg
caatttgggaaaggaaagtcctgttactacagattcttgaccaaaggccagcagtggata
tggctgcagacgcactattacatcacttaccaccagtggaactccaaacccgagttcatt
gtttgcactcaccttgtagttagttatgcagaggttcgggctcaaagaaggcgagacctt
ggccttgaggagtcatcaattgagctggcatcatcttctttgaagagtcacaagagctac
gtggacatcaggcagtgtggaaacagccaggaaaccagcagggaaagagtgtctgtgtcg
tcccacagctcccgcagatcttcgcacacggccctctccgactctgcatccacatcatcc
atgcgacacacagatgccagcactcccaccaggcagtcggtgtctctggggcagccagag
aagacctccctgaggctggcctcaactgggagcacccaggcgatcgtaactcctcaggcc
cccgccgaacatttgactcagcatccgatggcccagccagcgatgcccgctcagcaagcc
gcgatgcccgctcagcaagccgcgatgcccgtgtaccacttcccggcgcagctggggatg
atgcatcagctgaaggagcagctggaagagcggacgcgcattttgcaagcagacatcaag
acgcagcaggaggagctgcacgtcatcaaggagcagctccagctggtgcaggattccaat
ctgcagatgttgatgcagcagcccatgcccttggtgttcaacaacgcgcagcagccgagc
ccacggagggcagctcagcagcagcagacgggggcagctaggcaagccgtggccaagaag
cctcaacagcaaggcccggggggctcgaaacgctactgcagctctcacttaccgtcaccg
cggcacttcctcagggaaccttgtgtcacctcttcccaggttgctacctccttgggtttc
tcacttgctgcggttattgtgactcatcttgttcagggccaacgtcacccccagggcagc
tcctgccgacatctgtggagctgtaccaggcaggaagctagcgcctcttcctcctccact
taa
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