Alligator mississippiensis (American alligator): 102572595
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Entry
102572595 CDS
T03087
Symbol
SOX6
Name
(RefSeq) SRY-box 6
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102572595 (SOX6)
Transcription factors [BR:
amj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102572595 (SOX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
102572595
NCBI-ProteinID:
XP_019332652
UniProt:
A0A151MC49
LinkDB
All DBs
Position
Un
AA seq
819 aa
AA seq
DB search
MPSSSEVLAGVVGESRTEEWKNSHYIRMSSKQATSPFACAADGEEAMTQDLASRDKEEGN
NDQHATSHLPLHTIMHNNPHSEELPTLVTTIQQDAEWDSVISAQHRMESESNKLCSLYSF
RNTSTSPHKPDEGGRDRSELMTSVNFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSS
CMEKLLSKDWKEKMERLNTSELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDE
QKKLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPI
FPHDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYAA
QLASMQVSPGAKMPTTPQPPNTTGALSPTGMKNEKRGTSPVTQVKDEAAQPLNLSARPKT
AEPVKSPTSPTQNLFPASKSSPVNVSNKSGIPSPIGGPLGRGSSLDILSSLNSPALFGDQ
DTVMKAIQEARKMREQIQREQQQQQQQPPPHTVDGKLPSMNNMGLNNCRNEKERTRFENL
GPQLTGKPNEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYR
DSRGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQP
YYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQ
QPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSIPVIQSTYGMKTDSGSL
AGNEMINGEDEIEMYEDYEDDPKSDYSSENEAPEAVSAN
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaagttctgaagtgctggctggtgtggtaggagaaagcaggacagaagagtgg
aagaacagtcattatataagaatgtcttccaagcaggccacctctccatttgcctgtgca
gctgatggagaggaagcaatgacccaggacttagcatcacgagacaaagaagagggaaac
aatgatcagcatgcgacctctcatctgcctctgcacaccataatgcacaacaatcctcac
tctgaggaactaccgactctagtcaccaccatccaacaagatgctgagtgggacagtgtt
atctcagcccagcatagaatggagtcagagagtaataagttatgttccctatattccttc
cgaaatacctctacctcaccacacaagcccgacgaaggaggtcgtgaccgcagtgagcta
atgaccagtgttaattttggaacgccagaacgccgcaaaggaagccttgctgatgtggtg
gacacactgaaacagaagaaactagaggaaatgacccgaactgaacaggaggactcatcc
tgcatggaaaagctactttctaaagactggaaggagaaaatggaaagactgaacacaagt
gagctccttggagaaattaaaggtacaccagaaagcctggcagaaaaagagcgacagctc
tctaccatgatcacccagctgatcagtttacgagagcagctcctggctgcccatgatgaa
cagaaaaagctggcagcctcacaaattgaaaaacaacggcagcaaatggaccttgctcgc
caacagcaagaacagattgcaagacaacaacagcaacttctgcaacagcagcacaaaatc
aatctactgcagcagcaaattcaggttcagggtcacatgcctccgctcatgatcccaatt
tttccacacgaccagcggacattggcagcggctgctgcagcccagcagggattcctcttc
cccccaggaataacttacaagccaggtgataactaccctgtgcagttcattccatcaaca
atggcagctgctgctgcttctggactcagccctttacagctccagcaactctatgcagct
cagttggccagcatgcaggtttctcctggagccaagatgccaactactccacagccacca
aacacaacaggggcactgtcacctactgggatgaaaaatgaaaagagagggaccagccct
gtaactcaagttaaggatgaagcagcacagccactgaatctctcagcccgacccaagaca
gctgaacctgtcaaatccccgacatcgccaacacagaacctcttcccagctagtaaaagc
agcccagtgaatgtgtcaaataaaagtggcatccccagccctattggtggaccgttggga
agaggatcctctttagatatcctttccagtcttaactcacctgccctatttggggaccag
gacacagtaatgaaagctattcaggaggctcgaaagatgagagaacagatccagagggag
cagcaacagcagcagcagcagccgcctccacacactgttgatggaaaactgccttccatg
aataacatggggctaaacaactgcaggaatgaaaaggaaagaacacgatttgagaattta
ggcccacaattaacaggaaaacccaatgaagatggaaaactcggcccaggagtcatagac
cttacaaggccagaagatgcagaaggaagtaaagcaatgaatggctctgcagctaaacta
cagcagtattattgttggccaacaggaggtgccactgtggctgaagcgcgagtctacaga
gattcacggggccgagccagtagcgaaccacatatcaaacgaccaatgaatgctttcatg
gtttgggcgaaggatgaacgcagaaaaattctccaagcttttcctgacatgcataactcc
aacattagcaaaatcctaggctctcgctggaagtccatgtctaatcaagagaaacaacct
tactacgaagagcaggcacggctaagtaaaatccatctagagaagtatcctaactacaaa
tacaaaccccgaccaaaacgtacctgcattgttgatggcaagaaactgcgtattggagaa
tataagcaactgatgagatctcgaagacaggagatgaggcagttttttactgtaggacaa
cagcctcagattccaatcaccacaggaacaggtgttgtctatcctggtgctattaccatg
gcaactaccacaccatcacctcagatgacatctgattgctctagcacttctgccagccct
gagcccagcatccctgtcattcagagcacttatggtatgaagacggacagcggaagcctt
gctggaaacgaaatgataaatggagaggatgaaatagaaatgtacgaggactatgaggat
gatcccaaatcagactatagcagtgaaaatgaagcccctgaggcagtcagtgccaactga
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