Alligator mississippiensis (American alligator): 102572729
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Entry
102572729 CDS
T03087
Symbol
TSPEAR
Name
(RefSeq) thrombospondin type laminin G domain and EAR repeats
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amj03037
]
102572729 (TSPEAR)
04990 Domain-containing proteins not elsewhere classified [BR:
amj04990
]
102572729 (TSPEAR)
Cilium and associated proteins [BR:
amj03037
]
Other cilia and associated proteins
Stereociliary proteins
102572729 (TSPEAR)
Domain-containing proteins not elsewhere classified [BR:
amj04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
102572729 (TSPEAR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
102572729
NCBI-ProteinID:
XP_014460054
LinkDB
All DBs
Position
Un
AA seq
622 aa
AA seq
DB search
MLQVQGVRGFQLLASHSQSLCFPASRIFLHCDRFPEEFSIIVTLRVLSVPGKKNEYIFTV
MGEESSPVLVGLRYSLNKLHFLFWSRELSNGWQTRVTFRDISLVDNQWHTLVLAVSGHSF
SLTVDCSIPVDMVVDTPFPASLTMKGASFYVGSRRRRKGFFTGLLRQLVLLPGSDATSRI
CTNMNLKLAVLSIPPVLQDLPVKPGSNEVLKYPYEAEMKVTFGSRPPCTKTEKAQFWFNV
SQKGLHLCNGSAWLSVLEAKERLDYVEEYQNLVTNSETLGIEIFAIPEMGLFAATANRQT
PPGSAIYKWMDGKFVSYQNIPTYQAQSWKYFTIGKKIFLAVANFEQNERGQEFSVIYKWS
YRKEKFISYQRISTHNARDWEAFVIEGEAFLAVANHREGDNHNINSVIYRWNPRTGLFET
NQTISTSGAYDWEFFTIGPYSFLAVANTFNGTSTRIYSHIYVWLSGSFQLFQSILTFGAA
DWEVFHIGDRVFLVVANSHSYDSGTLMPSNLYAINSSIYELNITAQMFIKFQDLLTYSAL
DWEFFSVGEDSFLVVANSFDGFTFSVNSIIYRWQGYEGFVAVHHLPTFGCRDWEAFNTTG
GSYLIYSSAKEPLSKVLKLKTV
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgctccaagtacagggggtgcgtggattccagctcttggcttcccactcccagtccctc
tgcttcccagcttctcggatttttctccactgtgaccgctttccggaggaattctctatc
atcgtcaccctgagagtcctcagtgtcccaggaaagaaaaacgaatacatcttcaccgtg
atgggagaggagagcagcccggtgctggtaggacttaggtactcactgaacaaactccac
ttccttttctggagcagggagctatccaacggctggcagacgcgggtcaccttccgagac
atctccttggtggacaatcagtggcacactcttgtcttggcagtatctggacattccttc
tcccttactgtggactgcagtatacctgttgacatggtggtggacacaccgttccctgca
tccttgaccatgaagggagccagcttttacgttgggagcaggaggagaaggaaagggttc
tttacgggcttgttaagacagctggtcctgttgccaggatctgatgctacctcaaggata
tgcactaacatgaaccttaagctagcggtgctctccatccccccagtactacaggacctc
ccagtgaagccaggaagcaatgaggtgctgaaatacccatacgaagccgagatgaaggtg
acttttgggtcccgcccaccctgcaccaagactgagaaagcgcagttctggtttaacgtc
tctcagaaggggctgcatctctgtaacgggagtgcgtggctttccgtgctagaagctaaa
gagaggctggactacgtggaagaatatcagaacctggtcaccaattctgaaaccctgggc
attgagatctttgccattccggagatgggactctttgcggcaacagccaaccgacagact
ccacctgggtctgctatctacaagtggatggatgggaagtttgtgtcttatcaaaatatt
ccaacctaccaagctcaatcctggaaatatttcacaataggaaaaaagatcttcctagca
gtggctaattttgagcagaatgaaaggggtcaggagttctctgtaatatacaagtggagc
tacagaaaagagaaattcatctcgtaccagaggatctccacgcacaacgctagggactgg
gaggcctttgtcattgagggagaggccttcctcgcagttgccaaccacagagaaggagat
aatcacaacatcaacagtgtcatatacaggtggaaccccaggactggactttttgagacc
aaccagaccatttctacctctggagcttatgactgggagtttttcaccatcggaccttat
tctttcctggctgtagccaatacatttaatggcacatccacgaggatctactcccacatt
tatgtctggctcagtggctcttttcagctctttcagtcaattctgacttttggtgctgcc
gattgggaagtctttcacattggggacagagtcttcctcgtggtggctaacagtcacagt
tacgacagtggaacgctcatgccaagcaacttgtatgccatcaattcctccatctatgag
ctgaacatcacagcgcagatgttcatcaagtttcaggaccttctcacttacagtgctctg
gactgggagtttttttcagtgggagaagactcttttctagtggtggcaaactcttttgat
ggtttcaccttctccgtcaacagtattatatacaggtggcagggatatgaaggctttgtg
gcagtgcaccatctcccaacctttggctgtagagactgggaagcttttaacacaactgga
ggctcttacctcatctactcaagtgccaaagagccactctccaaggtgctgaagctgaaa
actgtctga
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