Alligator mississippiensis (American alligator): 102572767
Help
Entry
102572767 CDS
T03087
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF like domains 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amj04990
]
102572767 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
amj04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
102572767 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
NIDO
EGF_TEN
fn3
EGF_2
EGF_CA
EGF_3
EGF_Teneurin
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_4th
cEGF
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
102572767
NCBI-ProteinID:
XP_014454269
UniProt:
A0A151NUP3
LinkDB
All DBs
Position
Un
AA seq
1450 aa
AA seq
DB search
MRGLPGWTVILVLGNWVWVEGIVPLADFYPFGLEQGDAVTLKQDDGGSGLQPISVKFPFF
GVGHTGLYVNNNGIISFLKEVSQFTPVAFPISKDRRVVAAFWADVDNRRAGDVYYRESKD
QALLERATKDIGQYFPEFPEFSAQWVFIATWYRVTFFGGSSFSPVNTFQIVLITDGKLSF
TIFNYESITWTTGMHASSGGDFAGLGGIAAQAGFNAGDGKRYFNIPGSRTDDIVDVEMTT
NVGIPGRWVFRIDDAQVQVGGCNNTTSVCLTLRPCLNGGKCIEDCITGNPSYTCSCLAGF
TGKRCHLDVDECLSHPCQNGATCINGVNSFSCQCPPGFKGTTCENEESPCEAKTCQNSGE
CQAVNGTAACVCQPGYTGEDCEAEVNECDSNPCLNGGRCIDLVDNYTCVCVEPFVGQRCE
TDLSSCEDRNCRNRQTCNYIRPGRYICTCSPGYYGSNCQYGGPRVASACLSNPCQNEGNC
LETEQGYICECPEGYTGPNCRDKLSEDCECRNGGRCLDGNFTICQCPPGYFGLLCEFEVT
TTPCNVNTQCPDGGYCMEYGGSYLCVCHTDYTTNHSVPSPCDSEPCLNGGSCEVHDDSYT
CECPRGFLGQHCEKVRPRLCSSGPCRNGGTCKEADGEYYCACPYRFTGKHCEIGKPDPCA
SGPCKSGGTCFHYIGKYKCDCPPGYTGRHCEIAPSLCFLSPCENGATCEDLGNNYICTCP
SGYIGKHCQTEVDCGVPSEVKHARAMFNSTRVGSLAEYYCDLGYVLSRHHAPRVCSPQGT
WSDPPECDEIDECRSQPCLNGGSCKDRIAEFLCVCEAGYTGLHCELEIDECQSDPCKNGG
TCRDLPGSFACLCPDGFMGIHCETEVDACESSPCQNGGDCENYSGSYLCVCPEGFFGYHC
ETASDPCFSSPCGSRGYCLPYNGSHSCTCKVGYTGKNCEKELLPPTSLKVEGVEDTGVLI
SWHPPEDPIAKQLTDGYAVTYVSLDGSYRRTDFVDRSRSAHQLRALASGRAYNISVFSVK
RNVNNKNDISRPITLITRTRPHPVEGFEITNVTASAITVQWALHRLKHSTVSRVRVSIRQ
PGGVEHHTVELNSSVAKYTFWDLQPGERYIIHVTTLSGVGTEDHPSESLATAPFHVWTRP
LPPRNLTASRVGATTVYMTWEQPPASSSSVEGYIINVTTSQSVKSRYVPNGKLSSYTVRD
LLPGQRYRLSVTAVQNTEQGQVHSDPAHLYVMTLQRDGTQERRWSQGGHPRILRNRLPPA
FLPELRLLADHDISEEPSQAPRYTELVDGRGRISAKFSSLPNVAITMKTQPEAPVKLENI
EESTNRVSLALQLPESENKNRESASQNCSMNPCRNGGTCVMVAESYQCDCSPGFKGRHCE
LACKKVPQSCTRLYSETKSFPVWEGSVCHYLYKRVYKVHQDICYKESCESTVSKKTASRK
QSNSHTLKKP
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcctacccggctggaccgtgatcctagtcctggggaactgggtttgggtcgag
ggtattgtgcctctggctgacttttacccctttggcttggagcagggggatgctgtcact
ttgaaacaggatgacggaggctccgggcttcagccgatttcagtgaaattccctttcttt
ggagtgggacacacaggactttatgtgaacaacaatggaatcatctctttcctgaaagaa
gtttctcagtttacgccagttgcttttccaatctccaaggatcggcgtgtggtggcagca
ttctgggctgacgtggataaccgaagagcgggtgatgtgtattaccgggaaagcaaggac
caggccctcttggagagagccaccaaggacattgggcagtatttcccagaattcccagaa
ttctctgctcagtgggtttttattgccacatggtatcgggtgaccttctttggaggaagt
tctttttctccagtaaacaccttccagattgtcctcatcaccgatggcaaactctccttc
actatcttcaactacgagtctatcacctggaccacaggcatgcatgccagcagcggggga
gactttgctgggcttggtggtattgcggcccaggcaggtttcaacgctggtgacggaaag
cgctacttcaacatccccggatctcgcactgatgacatcgttgacgtggagatgacaaca
aatgtgggtatccccgggcgctgggtgttcagaatcgatgatgcccaggtgcaagtgggg
ggctgcaacaacacaacctctgtgtgcctgacgttacggccgtgtctgaatggagggaaa
tgcattgaggattgcatcacagggaacccctcttacacctgctcgtgcctggcaggcttc
actggaaaaagatgccaccttgatgtagatgagtgcctttcccacccatgtcagaatgga
gccacctgcattaatggtgtcaacagcttcagctgtcagtgtccaccagggttcaaaggc
actacatgtgagaatgaggagtcgccatgtgaagccaagacctgccagaacagtggggag
tgccaggcagtgaatgggacagctgcatgcgtgtgccagccaggatacacaggggaggac
tgtgaggcagaagtgaacgagtgtgattccaacccctgcctgaatgggggtcggtgcatt
gacctggtggacaactacacctgcgtgtgtgttgagcccttcgtgggacagcgctgtgag
acagacctctcctcctgcgaggaccggaactgccggaaccgccagacgtgtaactatatc
cgccctggacgctacatctgcacttgctccccaggctactatggcagcaactgccagtac
ggtgggcctagagtggcaagtgcttgtctctccaatccatgccagaatgaggggaactgc
ctggaaacagagcaaggctacatctgtgaatgcccagagggctacacaggtcccaactgc
agagacaagctttccgaagactgtgaatgtcggaatgggggaaggtgtctggatggaaac
ttcactatctgccagtgtccgcccgggtacttcggtctcctctgtgaattcgaagtgacc
acaacaccatgcaatgtgaacactcagtgcccggatgggggctactgcatggagtatgga
gggagctacctgtgcgtgtgtcacacagactataccaccaaccactctgtaccatccccc
tgtgactcggagccctgcctgaatgggggatcctgtgaggtccatgatgactcatacacc
tgcgagtgtccccgtgggttcctgggccagcactgtgagaaagtcaggccacggctctgc
agctctgggccctgccgtaacgggggcacatgcaaggaggcagatggagaatactactgt
gcctgtccctaccgcttcacagggaagcactgtgagataggcaaaccagacccctgtgcc
tctggcccatgcaagagtgggggcacctgcttccattacattggcaagtacaagtgcgac
tgccctccaggctacacaggacgacactgtgaaattgccccttctctgtgcttcctgagc
ccatgtgagaatggagccacctgtgaggaccttggcaacaactacatctgcacatgcccc
tctgggtacatagggaagcactgccaaacagaggtggactgtggggtccccagcgaggtg
aagcatgcccgggcaatgttcaattccaccagggtgggttcattggctgaatactactgc
gacctgggctatgtcctgagccgtcaccatgccccccgtgtgtgcagtccccagggcacc
tggagcgaccccccggagtgtgatgagattgatgagtgcaggtctcagccctgtctgaat
gggggctcatgcaaggaccgtattgctgagtttctgtgtgtgtgtgaagcaggatacaca
ggcctccactgtgagttggagatcgacgaatgtcagtccgacccttgtaagaatggagga
acctgcagagatctcccaggatcttttgcttgtctttgtcccgatggtttcatgggaatc
cactgtgagactgaggtagatgcctgtgaatcgagtccctgccaaaacggaggggactgt
gaaaactacagtggttcctacctgtgtgtgtgcccagagggtttctttggctaccactgt
gagacagccagcgatccctgcttttccagcccatgtggcagcagaggctactgcctgcct
tataatggatcccacagctgtacctgcaaagtgggctacacaggcaagaactgcgagaaa
gaattgttgccaccaacctcattaaaggtggaaggggtggaggacactggtgtattgatt
tcttggcacccacctgaggacccaatcgccaagcagctgactgacggctacgccgtgacg
tacgtatccttggacggctcttaccgcaggacagattttgtggaccgaagtcgttctgcc
caccaattgcgggcactggcctccggcagagcctacaatatttctgtcttttcagtcaaa
cgcaacgtgaacaacaagaatgatatcagcaggcccatcacgctgatcacacgcactaga
ccacaccccgtggaggggtttgagatcaccaacgtgacggccagtgccatcacagtgcag
tgggctctccaccgcctcaagcactccactgtcagcagggtgcgtgtctccatccgccag
cctggcggtgtggagcaccacactgtggagctgaacagcagcgtggccaagtacacgttc
tgggacctccagccaggagaaaggtacattatccatgtgacgaccctgagcggggtgggg
acagaagaccatccctcagagagcctggccacagctcccttccacgtgtggacacggccc
ctccctcctaggaacctcactgcttccagggttggtgccaccacagtttacatgacatgg
gaacagccaccagcaagttcaagttcagtggagggctacatcatcaacgtcaccaccagc
cagagtgtgaagagccgctacgtgcccaatgggaagctgtcttcttacacagtgcgtgac
ctgctgccagggcagaggtaccgtttgtccgtgacagccgtccagaacacagagcaaggc
caagtgcacagcgacccggcccacctgtatgtcatgaccctgcagagggatgggacacaa
gagcggcgatggagccaggggggacacccccgcatcctccggaacaggctgcccccagcc
ttcctgcctgagctgcgcctgctcgcagaccatgacatctcagaggagccctcacaggcc
cccaggtacactgaactggtggacggcagaggaaggatcagtgccaaattcagcagcttg
ccaaacgtagccattaccatgaaaacacaacctgaggctccagtgaagctggaaaacatt
gaagaatcgaccaatcgtgtcagtctggccctgcagctgccagagtcagagaacaagaat
agagagagtgccagccagaactgctccatgaacccctgcaggaatgggggcacctgtgtg
atggttgctgagtcctaccagtgcgactgcagccctggcttcaagggcaggcactgtgag
ctggcttgcaagaaggtcccgcaatcctgcacacggctgtactcagaaaccaagtcattc
cctgtctgggagggcagtgtctgccattatctgtacaagagggtctacaaagttcaccaa
gatatctgctacaaggagagttgtgaaagcacagtttcaaagaagacagccagcaggaaa
caaagtaacagtcatacactgaagaagccctag
DBGET
integrated database retrieval system
