Alligator mississippiensis (American alligator): 102572847
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Entry
102572847 CDS
T03087
Symbol
ATRX
Name
(RefSeq) ATRX, chromatin remodeler
KO
K10779
transcriptional regulator ATRX
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102572847 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102572847 (ATRX)
03036 Chromosome and associated proteins [BR:
amj03036
]
102572847 (ATRX)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
102572847 (ATRX)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
102572847 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
102572847
NCBI-ProteinID:
XP_006262631
LinkDB
All DBs
Position
Un
AA seq
2425 aa
AA seq
DB search
MTAELMSESKLDTLVQKLHDFLAHSSEESEDANSPPRLSVNKNTDKSSEPENSPTPMENN
REEGNSSSERSKSLGSSRSKRKPTVVTKYVGSDDEQTLDETVNEDVSNENSENDVDMKSL
PKGTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEAPKKRGEEGLHGIVSCTACGQQVN
HFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAF
CKKCILRNLGRKELSTIMDENNQWHCYICQPEPLLDLVTACDSVFENLEQLLQQNKKKIK
VESEKSKIYDHAIKFSPKRNSSNCNGEEKKIDDSYSGSLTYSYKALMVPKDLLKKAKKLV
ETTTNMNASFVNFLKKATENSEINPTVQVRQLKAFKSVLSDIKKAHQVLEEGLNLEIQVL
DAKIKEKNTKEKKNETRPEKMEMKKKEVKEHADLKEKDIVKPEEKIESAQSDNEPMDQSV
PATEQTENKNASSEDKRSDTNAEPQYEPNSTEALDMDIVSVPTSVPEDIFETLESAMEIQ
TASEEQGSRSATAEQETLNANIKSNTPLKDTKGGPKLKASAKVTKELFVKLTPVSLSDSP
VKTEDQEGSLEKEAKNVDAVSKAENCDSGKENHDAGNECLPQNDAVLLIEESDLRRSPRV
KTTPLRRQTDVNPLTSNSEEDSNDTGNEKRKQKSSSQSKRKQDKRNSSDKTIDSPKPSKL
SKSKKSNVLDQSSDSDEMPAVLKKVAMLSRSSSEIDSNTETPPNFQKITNDLKKQSKKDE
NGKRKRRSSSSGSDLDSKRGKSTKDSTSAKKKRQNYSDSSNYDSELEREIKSLSKIESAK
KAKKKYSRKEDSYDSSEEEQSKKGTSSKKKKKINVKKQRDESSNDESENSSPEREDTNNF
SEDKKSKRTAIKEKKNRDLNQGTSTEKQDELLDLEKSNLEKTKSCPSEGKNRTQAKEKKN
RELKKKKAQDDSSSDGAEKAVKKEQNCDSSEDKFKNEKATESEEKKSENLKKKRHKKEQN
DSSSDAEKSSPEKDGYNSSENNKSKNEKVVKKRRNLRERITKRAQIDSSSDAEQSRKKRE
SSSDDDKRNKRIEAKEKKKISHKKKASKKEHNDSLSSSDEESYEDNKKKSKRGSTKESKK
GNLKEKKRISKKQKDLTSSSSDEEESDDQKSTGDGSSDEQKIVPVTEDLMMSFNTGFCQS
SGDEGETKSGAVPMEEEEDDDDPENRIAKKMLLEEIKANLSSDEDASSDEEPAEGKKKTG
KQNENTGDDEENEKEENSESDSDDEESKKPRYRHRLLRHKLTVSDGESGEEKKRKSKDTK
EGKRRNRRKVSSDGSNDSEFHESEVSEEVSESEDDQRRRTRSSKKAEAEENRSYKQKKKR
RRIKVQEDSSSENKSNSDEEENDDSKSPGKGRKKIRKIIKDDKLRTETQNALKEEEERRK
RIAEREREREKLREVIEIEDASPLKCPITTKLVLDEDEETKEPLVQVNRHIVTKLKPHQV
DGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVV
CPLNTALNWLNEFEKWQDGLEDDEQLEVCELATVKRPQERGYMLQRWQEEGGVMIIGYEM
YRNLAQGRNVKSRKLKEIYNKALVDPGPDFVVCDEGHILKNEASAVSKAMNAIQSRRRII
LTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTPVDVRVMKKRAH
ILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTPLQCKLYQFYLDHLTGVGSGEGGRG
KAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSLDDFIASDSDETSMSLSSDD
YAKKKKSKGKKAKKESSPSGSGSGSDNDVEVIKVWNSRSRGGGEGNTEDLANTPAIPAKS
DEGKATSSSNPGSPAPDWYKDFVTDADAEILEHSGKMVLLLEILRMAEELGDKVLVFSQS
LISLDLIEDFLELASTEKSDKEKPIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDE
TNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQNKPVFVYRF
LAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKK
RDTPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGL
TMRFNMPAGTNMPHVNYNTQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNNVTAA
RIQPLEDIISAIWKDNVTLTESQVQALALSRQASQELDVKRREAMYNDVLTKQQMLISCV
QRILMNRRLQQQYNQQQQQQMSYQQAAMSHLMMPKPPNLIMNPSNYQQIDMRGMYQSVSG
GMQPPPLQRAPPPMRGKNPGPSQGK
NT seq
7278 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcggagctcatgagtgaaagcaagctggacaccctggtacagaagcttcatgac
ttcttggctcactcatctgaagaatcagaggacgcaaattctcctccaagattatctgtg
aacaaaaatacagataaaagtagtgagcctgaaaacagtccaactccaatggaaaataat
agggaagagggcaatagttcttcagaaagatccaaatctttaggatcatcacgttcgaaa
aggaagcctactgtggtaacaaaatatgttggatcagatgatgagcaaaccttagatgaa
actgtaaacgaagatgtttcaaatgaaaactcagaaaatgatgttgacatgaaaagcttg
ccaaaaggtacagtggttgtacaaccagagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaaataccgttaaaatgaaacctgaggctcccaaaaag
cgtggagaggaaggactgcatggaattgtaagctgtacagcttgtgggcaacaggtgaac
cattttcaaaaggattcaatctatagacaccctacactgaaagttcttatttgtaagact
tgctacaaatattatatgagtgatgatattagtcgtgattcagatggaatggatgaacaa
tgtagatggtgtgctgaaggcgggaacttaatttgctgtgacttttgccataatgccttc
tgcaaaaagtgcattctgcgcaaccttggtcgaaaagagctgtcaactataatggatgaa
aataatcaatggcactgctacatttgccagccagaacctttgttggacttggtcactgca
tgtgacagtgtctttgaaaatttagaacagttattacaacaaaacaaaaaaaagataaaa
gttgagagtgaaaaaagtaaaatatatgaccatgcaatcaaattttctccaaagagaaat
agttcaaattgtaatggagaagaaaaaaaaatagatgattcatattctggttcattaacc
tattcctacaaagcacttatggtgccgaaggacttgcttaaaaaggctaaaaaactggtt
gagactacaacaaatatgaatgctagttttgtaaattttttgaaaaaagcaacagaaaat
tcagaaataaatcccactgtacaggttcgccaactaaaagcttttaaatctgtgttgagt
gacatcaaaaaagctcatcaggtattagaagaaggtctgaatttggagattcaagttttg
gatgctaaaatcaaagaaaaaaataccaaagagaaaaaaaatgaaactagaccagaaaaa
atggagatgaaaaaaaaggaagtaaaggaacatgcagacttaaaagagaaggacattgta
aagcctgaggaaaaaattgagtcagcacagtctgacaatgagcccatggatcaaagtgtt
ccagcaacagaacaaacagaaaacaagaatgctagcagcgaagataaaaggtctgataca
aatgcagaacctcaatatgagcctaatagtacggaggctttagacatggatattgtgtct
gttcctacttcagtccctgaagatatttttgagactctagaatctgctatggaaattcaa
actgcatctgaagaacagggcagtagaagtgcaacagcagagcaggagacactaaatgca
aatataaaatctaatactcctctgaaagacactaaaggaggtccaaagttaaaagcatca
gctaaagtaacaaaagaattgtttgtaaaattgactcctgtttccctttctgattcccca
gtaaaaactgaagatcaagagggcagtctggaaaaggaagctaagaatgttgatgcagta
tctaaagcagaaaactgtgattctggaaaagaaaaccatgatgctggcaatgaatgcttg
ccacaaaatgatgctgttttattgatagaagaatctgatctcaggaggtccccacgtgta
aagaccactcctctgaggcgtcaaacagatgttaatcctttgacatctaattcagaagag
gacagcaatgatactggcaatgaaaagcgtaagcaaaagtcatcatcccaatcaaagaga
aagcaagataaaagaaattcttctgacaagactatcgatagccctaaacctagtaaactt
tctaaatccaaaaaatcaaatgtgctggaccaaagttcagattctgatgagatgccagca
gtccttaaaaaagtagccatgttaagtcggagttcttcagagattgatagcaatactgaa
acacccccaaattttcagaagattacaaatgatcttaagaaacaatcaaagaaagatgaa
aatggaaaacgaaaaagaagaagttccagttctggttcagatttagattccaaaagaggc
aaatcaactaaagactctacttctgcaaaaaagaaacgacaaaactattcagattcttca
aattatgactctgagttagaaagagaaataaaaagtttgagtaaaattgaatctgcaaaa
aaagccaagaagaaatactccaggaaagaagacagttatgattcctctgaagaagagcag
agtaagaaaggaacttctagtaagaaaaagaagaaaataaatgtgaagaaacagcgagat
gaatcttctaatgatgaatctgagaattcatccccagagagagaggacactaataacttt
tctgaagataaaaaaagtaagagaacagccattaaggaaaagaaaaatagagatttaaac
cagggaacttcaacagagaagcaggatgagttgttggatcttgagaagtcaaacctggag
aaaacaaaaagctgcccttctgaaggtaaaaatagaacacaagctaaagaaaagaaaaac
agagagctgaagaagaaaaaggcgcaagatgattcttcgtcagatggtgctgagaaggct
gtaaaaaaagagcagaattgtgattcttcagaggacaaattcaagaatgaaaaagcaaca
gaaagtgaagagaagaaaagtgaaaacttaaagaagaaaagacacaaaaaagaacaaaat
gactcttcttctgatgctgagaagtcatctccagagaaagatggctacaattcctctgaa
aacaataaaagtaaaaatgaaaaggtggttaagaaaagaagaaatctacgagagagaata
actaagagagcgcagattgattcatcttcagatgctgagcagtcccggaagaaaagagag
agttcttctgatgatgataaacgaaataaacgtatagaagctaaagaaaagaaaaagata
agccacaaaaagaaagcttctaagaaagagcataatgactctttgtcctcttctgatgaa
gaatcttatgaagataataaaaaaaaaagtaaaagaggttccactaaggaaagcaaaaaa
ggtaacttaaaagaaaagaagagaatttctaaaaagcagaaggatcttacatcgtcttca
tcagatgaggaagagagtgatgaccagaagtcaacaggggatgggagcagtgatgagcag
aagattgtgccagtgacagaagatttaatgatgtccttcaacacaggattttgtcagtcc
tcaggagatgaaggagagactaaatctggggctgttccaatggaggaggaggaagatgat
gacgatcctgagaatagaattgccaagaaaatgcttttagaagaaatcaaagccaatctt
tcctctgatgaggatgcatcttcagatgaagagccggctgaaggaaaaaagaaaactgga
aagcaaaatgaaaacacgggagatgacgaggagaatgaaaaggaagagaattctgaatca
gattcagatgatgaagaatcaaagaagcctagatatagacacaggctgctgagacataag
ctaactgtgagtgatggagaatctggggaagaaaagaaaagaaaatctaaagacactaaa
gaaggcaaacgcagaaatagaaggaaagtgagcagcgatggctcaaatgactcagagttt
catgaatctgaagttagtgaagaagttagtgagtctgaagatgaccagcgtcgtagaaca
agatcttctaagaaagccgaggcagaagaaaaccgcagttacaagcaaaaaaagaaaagg
cgacgcattaaagttcaggaggattcttccagtgaaaacaagagcaactccgacgaggaa
gagaatgatgattcaaaatctcctggaaaaggcaggaagaaaatcagaaagattattaaa
gatgataagcttagaacagagacacaaaatgcactgaaagaggaggaagaaagaagaaaa
cgtattgcagaaagagagcgagagagagagaaactgagagaggtgatagaaatagaagat
gcttcacccctgaagtgtcctattacaactaaactggttttagatgaagatgaagaaacc
aaagaaccattagtgcaggttaacagacatatagttactaaactaaaaccacatcaagta
gatggtgttcagttcatgtgggactgttgttgtgaatctgtgaaaaaaacaaagacatct
ccaggctctggatgcattcttgctcactgtatgggtctagggaaaacattgcaggtagtg
agttttctccatacagttctgttatgtgacaagctggatttcagcactgctcttgtagtg
tgtccattgaacacagccttgaactggctcaatgagtttgaaaaatggcaagatggttta
gaagatgatgaacaattagaggtctgtgaactagcaactgtgaaacgccctcaagagaga
ggctacatgctgcaacgatggcaggaagaaggaggtgttatgatcataggctatgaaatg
tatcgtaatcttgcacaaggcaggaatgtgaagagtagaaaacttaaagaaatatataac
aaggctctggttgatccaggccctgactttgttgtgtgtgatgaagggcatatattaaaa
aacgaagcttcagctgtttctaaagctatgaatgctatacaatccagaaggaggataatt
cttacaggaacaccactacagaataaccttatagaatatcactgcatggttaattttatc
aaagagaacttgcttggatcaattaaggaattccgaaatcgttttataaatccaatccag
aatggtcagtgcgcggattctacccctgttgatgtaagagtaatgaaaaagcgtgcacat
attttatatgaaatgttagctggatgtgttcagagaaaagattacactgcattaactaag
ttcctgccaccaaaacatgagtatgttcttgcagttagaatgacgcctcttcagtgtaaa
ctctatcaattctacttggatcacttaacaggtgtaggtagcggtgaaggtggaagaggc
aaagctggagctaaactctttcaggacttccagatgttaagtagaatctggactcaccct
tggtgtttgcagctggactatattagcaaagaaaataagggctattttgatgaagatagt
ctggatgacttcatagcttcagattctgacgaaacttcaatgagtttaagctctgatgat
tatgcaaagaaaaaaaaatccaaggggaaaaaagcaaagaaagaaagcagccccagtggc
agtggcagtggcagtgataatgatgttgaagtgattaaagtttggaattcgaggtctcgt
ggaggtggagaaggaaatacagaggaccttgcaaacacccctgctattcctgcaaaatca
gatgagggtaaagccacatcctcttccaacccaggaagcccagctccagactggtataag
gattttgtcactgatgcagatgctgaaatattggagcattctgggaaaatggttcttctc
ttggaaatacttcgtatggcagaggagctcggtgacaaagttctagtttttagccagtct
ctaatatcactggatttgatagaagactttcttgagctggccagcacggagaaaagtgac
aaagagaaacctatttataaaggtgaaggaaaatggttcagaaatattgactactatcgt
ttagatggttcaactacagctcagtctagaaagaaatgggctgaagagtttaatgatgaa
actaacgtgagaggccgtttgtttattatttccactaaagcaggttctcttggaataaac
ctagtggctgctaatcgtgtgattatctttgatgcctcttggaacccatcctatgatatc
cagagtatttttagggtttaccgctttgggcaaaacaaacctgtgtttgtgtacaggttc
ctagctcagggaacaatggaggacaagatctatgatcgccaagtaacaaaacagtcactg
tctttccgggttgttgaccagcagcaagttgagcgtcacttcaccatgaatgagctcaca
gagctctatacctttgaaccagatttgctggatgaccctaattcagaaaagaaaaagaag
agggacacacccatgctgccaaaggatacaattttggcagaattgcttcagatccataaa
gaacatatagtgggctaccatgaacatgactcactcctggaccacaaagaggaagaagaa
ttgactgaagaagaaaggaaggcagcttgggcagaatatgaagctgagaagaagggtctg
accatgcgtttcaacatgccagctgggaccaatatgccccatgtcaactacaacactcaa
acgccatatattcctttcaatctgggagctttgtcagcaatgtctaaccagcagctggag
gacctcattaatcaaggaagagagaaagttgtagaagccaccaacaatgtaactgcggca
agaattcagccccttgaagatattatctcagctatatggaaggataatgtgaccctgaca
gagagccaggtacaggccttggccctaagtagacaggcaagccaagagctggatgtgaag
cgcagagaagccatgtacaacgatgtcctgacaaaacagcagatgttaatcagttgtgtt
cagaggatacttatgaacagaagactacagcagcagtacaatcagcagcaacagcagcaa
atgtcttatcaacaagcagcaatgagtcatcttatgatgccaaagcctccaaatttaatc
atgaatccttccaactaccaacaaatagatatgagaggaatgtatcagtccgtttcaggt
ggtatgcagccaccaccactgcaacgcgcaccacccccaatgagaggcaaaaatccagga
ccttcccaagggaaataa
DBGET
integrated database retrieval system
