Alligator mississippiensis (American alligator): 102572910
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Entry
102572910 CDS
T03087
Symbol
RUNX1
Name
(RefSeq) runt related transcription factor 1
KO
K08367
runt-related transcription factor 1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102572910 (RUNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102572910 (RUNX1)
Transcription factors [BR:
amj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
102572910 (RUNX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
102572910
NCBI-ProteinID:
XP_006278486
LinkDB
All DBs
Position
Un
AA seq
473 aa
AA seq
DB search
MASNSIFESFPSYQQCFIRDTSTSRRFTPPSAALSPGKMSEALPLPGADPSGALAGKLRG
ADRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVM
AGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAI
KITVDGPREPRRHRQKLDEQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASL
NHATAFNPQPQSQIQDTRQVQPSPPWSYDQSYQYLGSIATPSVHPATPISPGRASGMTSL
TAELSSRLSGASDLTAFSDPRVGIDRPFSTLPSISDPRMHYPGAFTYTPTPVSSGIGIGM
SAMSTATRYHTYLPPPYPGSSQAQGSPFQTSSPSYHLYYGTSAGSYQFSMISGGDRSPPR
IHPPCTNASTGSTLLNPNLPNQSDVVEAEGSHSNSPTNMATTARLEEAVWRPY
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaacagcatatttgagtcatttccttcttaccaacagtgcttcataagagat
accagcaccagccgccgcttcacgccgccctccgccgcgctgagcccgggcaagatgagc
gaggcgctgccgctgcccggcgcggaccccagcggcgccctggccgggaagctgagaggc
gcggaccgcagcatggtggaggtgctggccgaccaccccggggagctggtccgcaccgac
agccccaacttcctctgctccgtgctgcccacgcactggcgctgcaacaagacgctgccc
atcgctttcaaggtggtggctttaggagatgtccctgatggaacactggtcacagtaatg
gctggaaatgatgaaaactactctgcagagctcagaaatgctacagctgccatgaaaaac
caagtcgccaggttcaacgacctcagatttgtgggcagaagtggaagaggaaagagcttc
accctaaccatcacagtctttacaaatcctccccaagtagccacataccacagagccatc
aagataacagtggatggacctcgtgaacccagaagacatcgtcagaaactagatgagcag
acaaagcctgggagcttgtccttttcagagcgtctgagtgaactggagcagttgcgtcgc
acagccatgagggtcagcccacatcacccagcccccacacctaatccacgagcttccttg
aaccacgccactgcttttaaccctcagcctcagagtcaaattcaggatacaagacaagta
cagccatctcctccatggtcctatgatcagtcctaccaatacttgggatcaattgcaacg
ccttcagtgcaccctgccacaccaatttcacctgggagagctagtggcatgacatccctc
acagcagaactttcaagccgactttcgggtgcttctgacctgacggcattcagtgacccc
agggtaggaattgatcgccccttctccacacttccttcaatttctgatcctcgtatgcac
tacccaggagcattcacctacaccccaacgcctgtcagttcaggaataggaattggtatg
tctgccatgtccactgccacgagataccacacttatctccctcctccctatcctggttct
tctcaggctcaaggaagcccatttcagaccagctcgccttcttaccatctctattacgga
acatcagcagggtcataccagttctccatgatctctgggggggaccggtcacccccacgt
atccaccctccatgtaccaatgcttccacgggatctacgctcctcaaccccaaccttcca
aaccaaagcgatgtcgtagaggcagaaggaagtcacagtaactcccctactaacatggct
accacagcaagactagaggaagcagtatggcgaccatattga
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