Alligator mississippiensis (American alligator): 102572911
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Entry
102572911 CDS
T03087
Symbol
SOX30
Name
(RefSeq) SRY-box 30
KO
K09271
transcription factor SOX15/30
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102572911 (SOX30)
Transcription factors [BR:
amj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102572911 (SOX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
102572911
NCBI-ProteinID:
XP_019331538
UniProt:
A0A151MEH8
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All DBs
Position
Un
AA seq
457 aa
AA seq
DB search
MQALLEPSVKIDTKDVPLTVLPADAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAK
ANPAANNAEISVQLGLEWNKLTEEQKKPYYDEAQKIKKKHREEFPGWVYQPRPGKRKRFP
LTVSTMFSGTSQNIITTNPTTIYPFRTPTYSVVIPGVQSSISHPVCEASTIQLSASIQHP
GPITLFQPSVGSTTSMAVPAPSMPLHPVIPPQHFTGPAQTEAHHVTSGSSCSVKRPTPVC
IESASRNPTSMSITHTRFPASTSQPPNEYSSVAACPRSAQLPPATAIPHSHLYQPPPIGH
PATLFGAPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFASSVPECLGFYEDQYQKH
EAMFSALNRDYPFREYPDEHTHSEDSHSCESLEGVSYYNSHSHSEEECLNPVPQLDIGTL
DNVFTGTPSTPSSIQQVNVTDSEEEEEEEEGKVLRDL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccctgctggagccctcagtgaagatcgacaccaaagacgtgcccctcacggtg
ctgccggccgacgcagggataccggataccccgtttagcaaagacagaaacggtcacgta
aagcggcctatgaacgcgttcatggtgtgggcaagaattcaccggccagcgctagccaaa
gctaacccagctgctaataatgccgaaatcagtgtccagcttggattagagtggaacaag
ctcaccgaggagcaaaagaagccctattatgatgaagctcagaagattaaaaaaaagcac
agggaagaatttcctggctgggtttatcaaccgcgaccaggcaaaagaaaacgcttccca
ctgaccgtctccaccatgttttccggcacctctcagaatatcatcacgacgaacccaacc
accatttaccctttccggacacccacgtactctgtcgttatccccggggttcagagcagt
atcagccatcccgtttgtgaggcttctaccatccagctctcagcttccattcagcaccca
ggcccgattacgcttttccagcccagtgtgggaagcaccacatccatggctgtcccagct
cccagtatgcccctgcacccagtcatccccccgcagcactttacgggacctgcccagaca
gaagctcaccacgtcacttccggatccagttgctctgtgaagagacccaccccggtgtgc
attgagagtgccagcaggaaccctactagcatgagcatcacccacaccagattccctgcc
tctaccagccagccccccaacgagtactccagtgtggctgcttgtccgcggagcgcccag
ctccctccagccaccgccattcctcactcacacctctaccagcctcctcccattggccac
ccggccactctttttggagcgccgcctcggttttcgttccaccacccatacttcctgccc
ggacctcactactttccctccagcacgtgcccgtacagccgccctccgtttggctatggt
aatttcgccagctcggtgcccgaatgccttggcttctacgaagaccagtaccaaaagcac
gaagccatgttctccgctctgaacagagactatcctttcagggagtacccagacgaacac
acacatagcgaagactcccacagctgtgagagcctcgagggggtgtcttattacaacagc
cacagccacagcgaggaggaatgtttaaaccccgtgccgcagctggatattggaaccctg
gacaacgtgttcacgggaaccccgtcaacaccctccagcatccagcaagttaacgtgact
gacagcgaggaagaggaggaggaggaggaagggaaagtgttacgagatttgtaa
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