Alligator mississippiensis (American alligator): 102572932
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Entry
102572932 CDS
T03087
Symbol
LRBA
Name
(RefSeq) LPS responsive beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102572932 (LRBA)
Membrane trafficking [BR:
amj04131
]
Endosome - Lysosome transport
Others
Others
102572932 (LRBA)
Endosome - Golgi transport
102572932 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
102572932 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
WD40_Prp19
Neurobeachin
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
SUKH_6
IspD
Tospo_nucleocap
Motif
Other DBs
NCBI-GeneID:
102572932
NCBI-ProteinID:
XP_014449203
LinkDB
All DBs
Position
Un
AA seq
2850 aa
AA seq
DB search
MASEDKQVAQPTGDGGGGGGRAGAGSTLQPLHPAVPIRGIRMKFAVLAGLVEVGEVSNRD
IVETVFNLLVGGHFDLEMNFIIQEGEGITCMVDLLDKCDATCQAEVWSMFTAILKKSIRN
LQVCTEVGLVEQVLQRIDKADNMIADLLVDMLGVLASYNLTVRELKFFFSKLQGEKGKWP
PHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMDPVNN
INVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKFDFKPQKWYMVTI
VHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQMTAV
YLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKMLLYDGKLSSAIAFMYNPR
ATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSVGGVQVLFPLFAQLD
YRQYSSDEVDATVCSTLLAFIMELLKNSIAMQEQMLSCKGFHVIGYSLEKSSKVHVTRAV
LELCLAFAKYLSNLHNGVPLLKQLCDHILLNPAIWIHTPAKVQLILYTYLSTEFIGTVNI
YNAIRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGLDGPRPNQKEIFSLRAFLLMFIKQ
LVMKDHGVKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPSSMIPAFDQRNGLRVV
YKLLASKSEGIRVQALKVLGYFLKHLAPKRNTEIMLGHGLFSLLAERLMLQTTLISMTTY
NVLFEILTEQICTQVIHKQHPDPDSTVKIENPQVLKVIATLLRNSPQCPETLEVRRAFLS
DMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSEELKITEMVYAIFRILLYHAIKY
EWGGWRVWVDTLSITHSKVTFEMHKESLSQMYREYQGKGGEGSNLGLSTPIRTISGVREA
VTAGRQEYVEVRDATSACIVGDDNVEYSTQEKEMKPTTECEQQSHLAPNEGKKSEEENGQ
KTPELNRALGLDLSLQKEAVESGDTEITTGIAEAIEDSPSKTKGLVEETADVDGASPATQ
TILEEMLESPEILEKSTPEVEEEDDFVDLKEESSLPLPSEESVSTGNEEHSNLDNESQVT
LAAEQETISEKKPESTPLESEGAEGRDETKQELASVSEMRSSQIQEVTTQLSSEPNETED
EKTLASETKVTGEDGNTLTSEVCMPSEKKIAKLDVSSVASDTERLELKASTSLEATQSHR
PLPETSRQQDSSGQDLAATSDGQRRDSRSTMFRIPEFKWSQMHQRLLTDLLFSVETDIQM
WRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMIMACGGILPLLSAATSATHELENI
EPTQGLSVEASVTFLQRLISLVDVLIFASSLGFTEIEAEKNMSSGGILRQCLRLVCAVAV
RNCLECQQHTQMKPNTETLKSHKTIQSLTGAGKSSAKSPVDIVTGGISPIRDLDRLLQDM
DINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNERKKPHRSQSFKGS
ENGSSETATDVENPSATLGGSTPVSAEDSESTSSVRRRDSGLGEESTSGQANNSDVVAEA
VPQCVSAGPDAISEALCTLSLEVNKSQENQSEAGNELDNKPASSVAAAKNVNVKDILRSL
VSTPADGAAVDASLLPPTFLGALGDPAAEQPVQFHSFDRSVVVPPKKSTGSSSAATTNLP
THAVSVVSSLDSAQAPDLTKESPGKGSSNSKLPSVPTVSSVPEDSVSNMSITERLEHALE
KAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGLVCMKSSSSVVELVMLLCSQEWQNSIQ
KNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDIHRHAEFESLCAQYSAD
KREEEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGAWGSSAPSRPREFWRLDYWED
DLRRRRRFVRNPLGSTHPEATLKAAIEHAPEEDVLVRGKQSIKSQALGNQNSESEILLEG
DDDTLSSIEEKDLENLTGPVSLCTPAQLVAPSVVAKGTLSITSSELYFEVDEEDPSFKKI
DPKILAYTEGLHGKWLFTEIRSVFSRRYLLQNTALEIFMANRVAVMFNFPDQATVKKVVN
CLPRVGIGTSFGLPQTRRISLASPRQIFKASNMTQKWQHREISNFEYLMFLNTIAGRTYN
DLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALNPKRAAFFAERYESWEDDQVPK
FHYGTHYSTAGFALTWMLRIEPFTTLFLNLQGGKFDHADRTFSSVSRAWRNCQRDTSDIK
ELIPEFYYLPELFVNNNNYNLGVMDDGTVVSDVELPPWAKTPEEFVRINRLALESEFVSC
QLHQWIDLIFGYKQQGPEAVRSLNVFYYLTYEGAVNLSSITEPVLREAVEAQIRSFGQTP
SQLLIEPHPPRSSAMQVYLLLQSPLMFTDQAQQDVIMVLKFPSNSPVTHVAANTQPGLAT
PAVITVTANRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIATNTGMHRRQITDLLDQS
IQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDTGKLIQVVFGHWDVVTCLARSESYIGG
NCYILSGSRDATLLLWYWNGKTNNIGDNLNGDFATPRAILTGHDYEITCATVCAELGLVI
SGSKEGPCLIHSMNGDLLRTLEGPENSLRPKLIQASREGHCVIYYENGLFCVFSVNGKLQ
AAMETDDNIRAIQLSRDGQYLLTGGDNGVVMVWQVWDLKQLFAYPGCDAGIRSMALSYDQ
RCIMTGMASGSIVVFYNDFNRWHHEYQTRY
NT seq
8553 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgaagacaagcaagttgctcagccaacaggtgacggtggaggcggcggcggc
cgggcgggcgcggggagcacgctgcagccgttgcacccggcagtgccaatccgaggcatc
cgcatgaagttcgctgtgctggcggggctggtggaagtgggggaagtgtccaaccgggac
atcgtggaaactgtgtttaacctgcttgtaggaggccattttgatctggaaatgaacttt
attatccaagaaggagagggtattacatgcatggtagatctgttggataaatgtgatgcc
acttgccaggctgaggtatggagcatgtttacagcaatcctgaagaagagtatacgcaat
ctgcaagtttgcacagaagttgggcttgttgaacaagtgctccagaggattgataaagct
gataacatgattgcagatctcttagttgatatgttgggtgtgctggctagctataacttg
acagttcgggagctaaaatttttcttcagcaaacttcaaggggaaaaaggaaaatggcca
ccacatgctggcaagctgttgtctgtattaaaacacatgccccagaaatatggacctgat
gccttcttcaactttcccgggaaaagtgctgcagctattgccttacctcctatagccaag
tggccctaccagaatggatttacctttcacacttggttaagaatggatcctgtaaacaat
atcaacgtggataaggataagccttacttatattgttttcgcacaaacaaaggacttggt
tattctgctcactttgtaggaggctgtttgattgtgacatcaataaaatcaaaaggaaaa
ggtttccagcactgtgtgaaatttgatttcaagccacagaagtggtatatggttactata
gttcacatctacaaccgttggaagaacagtgaacttcgatgttatgtgaatggggaactg
gcatcatatggagaaataacgtggtttgtcaataccagtgatacatttgataaatgcttc
ctgggttcttcagaaacagcagatgccaatcgagtgttttgtggacagatgacagctgtt
taccttttcagtgaggctcttaatgctgctcagatctttgccatttatcagcttgggctg
ggatacaagggaacattcaaattcaaggcagaaagtgatctctttcttgctgagcatcac
aaaatgttgctgtatgatggcaaactctccagtgcaattgctttcatgtacaatccaagg
gctacagatgcacagctctgtttagaatcctcacccaaggataacccatctatctttgtt
cattctccacatgccctcatgctgcaggatgtgaaagcagttttgactcactccatccaa
agtgctatgcattcagttggaggagtgcaggtactttttcctctgtttgcacagttagac
tataggcaatactcatcggatgaagttgatgcaaccgtttgttccacgttgttggctttc
atcatggagttactgaagaactccatcgctatgcaagaacagatgctttcctgtaagggc
ttccatgtgataggatatagtctggaaaagtcttccaaagtccatgttacccgagctgtg
ctagaactatgccttgcctttgctaaatacctgagtaacttgcacaatggagtgcccttg
ctcaagcagctttgtgatcacattcttcttaatccagcaatatggattcataccccagca
aaggttcagttgatcttgtacacgtacctgtctactgagttcattggcactgttaacata
tataatgcaattcggcgagttgggacagttcttctggtaatgcacactttaaagtattac
tactgggtagtgaatcctcaagatcgtagtggaatcactccaaaaggattagatggaccc
cgacctaatcagaaagagatattttctctgcgagcattcttactcatgtttattaaacag
ctggtgatgaaggatcatggagtgaaagaagatgaattgcaggctatcctcaattatcta
ctcactattcacgaggatgacaatttaatggatgtcctgcagttgcttgttgctctgatg
tcagagcatcccagttctatgattcctgcttttgatcaaaggaatggattacgggttgtc
tacaaacttttagcttcaaaaagtgaaggaatcagggtgcaagctttaaaagtgttgggc
tacttcttaaaacaccttgctcccaagagaaatactgaaatcatgcttggacatggatta
ttctctttgctggctgaaaggctgatgcttcagacaaccttaatcagcatgaccacatac
aatgttctatttgagattcttacagaacagatttgcactcaagttatacataaacagcat
cctgacccagattcaacagtgaagatagaaaatcctcaggtactgaaagtaattgcgacc
ctgctacgtaattctccccaatgtccggaaaccctggaggtccgtagagcctttctctcg
gacatgattaaactttttaataacagcagagaaaacaggaggagtttgctgcagtgctca
gtgtggcaggagtggatgctttccctttgttattttaatcctaagaattctgaagagctg
aagataactgaaatggtgtatgccatattccgaatcttgctttatcatgcaatcaaatat
gagtggggtggctggcgtgtttgggtggatacgctctcaatcacacattcaaaggtaact
tttgaaatgcacaaagagagtctttcccaaatgtacagggaataccaagggaaaggagga
gagggaagtaatttaggactttccactccaatcagaactatatcaggagttagagaagct
gtaacagcaggaagacaagagtatgtggaggtgagagatgctacttcagcatgcattgtt
ggagatgataatgtggagtacagtacccaagaaaaggagatgaaacccaccactgaatgt
gagcaacaaagtcatttagcacccaatgagggaaagaaatcagaggaagaaaatggtcag
aaaacacctgaattaaatagagcacttggcttagacctttctctacagaaagaagcagta
gaatcaggtgatacagaaatcacaactggaatagctgaagcaattgaagattctccgagc
aaaaccaaggggcttgtggaagaaacagcagatgttgatggagcttctccagccacacaa
actatattagaagagatgcttgaaagcccagaaatactggagaagtcaacaccagaagtc
gaagaagaagatgactttgttgacctaaaagaggaaagcagtctgcctttaccttcagaa
gagtctgtatcaacaggcaatgaagagcacagcaatcttgacaatgaaagccaggtaact
ctagcagcagaacaggaaactatctctgagaagaagccagagtcaacacctttggagtcc
gaaggtgctgaaggccgggatgagacaaagcaggaattggcttcagtgtcagaaatgaga
agttctcaaatccaagaggtgacaactcaactcagttcagaaccaaatgagacagaggat
gaaaaaactcttgccagtgaaaccaaagtaactggagaagatggaaacacacttacttca
gaagtttgcatgccctccgagaaaaaaattgccaagcttgatgtttctagtgttgcatca
gatacagagagattggaactgaaagccagcacaagcctggaagccactcagtctcacaga
cccctgcctgagacatcacggcagcaagattcatcagggcaagatttagctgctacatca
gatgggcagagacgagattccaggtctaccatgtttcgtatccctgaatttaagtggtca
cagatgcaccaacgtttgctcacagatttacttttttcagtagaaacagatatacaaatg
tggagaagccattctacgaagacagtgatggactttgtgaacagcagtgacaacgtcatc
tttgtacataacacgattcacctaatctctcaagttatggacaacatgattatggcttgt
ggtggtatattgccattgctttctgctgctacatctgctactcatgaactggaaaatatt
gagccaactcaaggactttcagtagaggcttcagtaacgtttctccagagattaatcagc
cttgtggatgtgctaatttttgcaagctctcttggcttcactgagattgaggctgagaaa
aacatgtcatctgggggaattttgcgacagtgccttcgactggtgtgtgcagtggcggta
agaaattgtttggagtgtcagcagcatacccaaatgaaacctaatacagaaactttaaag
agtcacaagacaattcagagcctgacaggagcaggaaaatcttcagcaaagagtccagtc
gacattgtgacaggtggaatttctccaatacgagaccttgataggcttctgcaggatatg
gatattaaccgacttcgagcagtagtattccgagatatagaggatagcaaacaggctcag
ttcttggccttggctgttgtgtattttatatcagtcctcatggtatcaaaatacagggac
atattggaacctcagaatgaaagaaaaaaacctcatcgaagccagtcctttaagggatca
gagaatggaagtagcgagacagctacagatgtagaaaacccctctgctactcttggtggt
tcaactccagtttctgctgaagattctgaaagtacatcctctgtacgaagaagagactct
ggccttggagaggagtcgacttcaggtcaagcaaacaattcagatgtcgtagctgaagca
gtacctcagtgtgtcagcgcaggccccgacgccatcagtgaagctctatgcacactttct
ttagaagtcaataaatctcaggaaaatcaaagtgaggcaggaaatgagttggataataaa
cctgcatcttctgtagcggctgccaaaaatgtcaatgtaaaggacatccttagaagcttg
gttagcaccccagcagatggggctgcagtggatgcttctcttctaccaccaaccttcctt
ggagctcttggtgatccagcagctgagcagcctgtgcagttccattcctttgataggagt
gttgttgtacctccaaagaagtcaaccggttcctcttctgcagctactacgaatctaccc
acgcatgcagtgagtgtggtttcttcgctagactcggcgcaggccccagacctgacaaag
gaatctcctggaaagggttcatctaattcaaaattaccatcagtccctacggtttcttca
gtgcctgaggattcggtctcaaatatgagtattacagagaggcttgagcatgctttggaa
aaggctgccccacttctaagagagatttttgtggattttgctccatttctttctcgcact
ctgttgggtagccacgggcaagagctgctgatagaaggtcttgtgtgcatgaaatctagt
agttcagttgtggagctggtcatgctactttgttctcaggagtggcagaactcaatacag
aagaatgcaggcctagcctttattgaacttgtcaacgagggaagattgttaagccaaact
atgaaggaccacttagtaagagtggcaaatgaagcagaatttatcttgagcagacagaga
gcagaggatattcacagacatgctgaatttgagtcactgtgcgcccagtattctgccgat
aaacgagaagaagaaaaaatgtgtgatcatttgattagagcagccaagtaccgggaccat
gtgactgcaacccaactaatacagaaaattatcaacattctgacagacaagcatggagcc
tggggaagttctgcaccaagtcgtcctcgtgagttctggcgccttgactactgggaagat
gacttgcggcgccggcgacgatttgtgcgtaacccccttggatcgacacatcctgaagcg
acactaaaagcagccatagaacatgctcccgaggaagacgtgctggttaggggcaagcag
tccatcaagagccaggccctgggaaatcagaactcggagagtgagatcctcctggaaggc
gatgacgataccctgtcatccatcgaggagaaagacttggagaacctaacgggtccagtt
agcctgtgtacaccagctcagcttgtggcaccctctgtggtagcgaagggcactctttcc
atcacctcttctgaactctactttgaagtagatgaagaagatcctagttttaagaaaatc
gaccccaagattctagcttatacagaaggactccatggaaaatggctctttacagagatt
cgttcagtcttttcccgacgctatctcttgcaaaatacagcactggaaatcttcatggca
aacagagttgctgtcatgttcaacttcccagaccaagcaacagtaaagaaagtggtcaac
tgtctacctcgtgttggcattggtactagttttggactaccacaaaccaggcggatctct
ttggctagcccacgtcagattttcaaagcttccaacatgacccagaagtggcagcataga
gaaatttcaaacttcgaatatctgatgtttctaaatactatagcaggacgtacttacaat
gacttaaatcagtacccagtattcccttgggttatcacgaattatgaatcagaagagctg
gaccttacacttcctagcaacttcagggatttgtcaaagcctattggtgctctaaaccca
aagagagcagcattctttgcagagcgatatgagtcatgggaagatgatcaagttccaaag
tttcactatggcacgcattattcaactgcaggttttgcacttacatggatgttaagaatt
gagccctttacaacacttttcctcaatttacaaggtgggaagtttgaccatgcagataga
acattttcatcagtttcaagagcatggcgcaactgccagcgtgacacctcagatattaag
gagctgattcctgaattttattatctcccagagctgtttgttaataacaacaattacaat
ctaggagtgatggatgatggaacagtggtatctgatgttgaacttccaccatgggccaaa
actccagaagaatttgttcgtataaacagattggccttggagagtgagtttgtttcatgc
cagcttcaccagtggattgatctaatttttggctacaaacagcaagggccagaggctgtc
cgatccctgaatgtattctactatttaacctatgaaggagcagtgaatttgagttcgata
acagaacctgtattgagagaggctgttgaagctcaaatacgaagttttggacagacccct
tcccaactgctcatagagccacatcctccaagaagttctgccatgcaggtgtatctcctc
ctgcagagtccattgatgttcacagaccaagctcaacaggatgtcataatggtcctaaag
ttcccgtccaactcccctgtcactcacgtagcagccaacacccagcctggcctggcaact
cctgctgtaatcacagtcactgctaacaggctgtttgctgtaaacaagtggcacaatctt
cctgctcatcaaggtgctgtacaggaccagccataccagctgccagtggaaatcgatcct
ctcatagccaccaatacaggtatgcacaggaggcaaatcactgaccttttagaccaaagc
attcaggttcattctcaatgttttgtcatcacttccgacaatcgttacatccttgtgtgt
ggcttctgggacaagagtttccgagtttattctactgatacaggtaaactgatacaagta
gtgtttgggcactgggatgttgttacctgccttgcccgttcagaatcctacattggagga
aattgctacattctctcaggctcacgtgatgcaacactgctgctttggtactggaatggt
aaaaccaataacattggtgacaacctaaatggtgattttgccactccccgagccatcttg
acaggacacgactatgagatcacttgtgctacagtttgtgctgaacttggcctggtaata
agtggttccaaagaaggaccatgtctcatacattctatgaatggagacctattgaggaca
ttagaaggtcctgaaaattccctgagaccgaaacttatacaggcttcaagagagggccac
tgtgtcatatactatgaaaatggccttttctgtgtattcagtgtgaatggaaaacttcag
gctgctatggaaacagatgataacataagggcaatccagctgagccgtgatggacagtac
ctgcttacaggaggagacaatggagttgtcatggtatggcaagtttgggacctcaagcaa
ctttttgcgtacccaggatgtgatgctggaatccgatctatggccctgtcatatgaccaa
aggtgcataatgacgggtatggcttctggaagcatagtggttttctacaatgatttcaat
cgctggcatcatgaatatcaaacaagatactga
DBGET
integrated database retrieval system
