Alligator mississippiensis (American alligator): 102572964
Help
Entry
102572964 CDS
T03087
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes 4
KO
K06675
structural maintenance of chromosome 4
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102572964 (SMC4)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
102572964 (SMC4)
Condensin II
102572964 (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
APG6_N
Vac_Fusion
Motif
Other DBs
NCBI-GeneID:
102572964
NCBI-ProteinID:
XP_006272919
UniProt:
A0A151NB17
LinkDB
All DBs
Position
Un
AA seq
1292 aa
AA seq
DB search
MPRKRTKTSTAACQKGKETIEESTSDMEMGKDDAHPGKLSQQAALNEELANRSLEEILSS
ISPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNVID
SMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFC
VSRTAYRDNSSVYQISGKKSTFKDVGILLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQT
EHDEGMLEYLEDLIGSGRLKEPIQVLCRRVETLNEQRGEKLNRVKMVEKEKDALEGERNK
AIEFLTLENKMFKEKNHICQYYIYDLQKRINEMETQKQKIHEETKDVNEKSSKLADEMKD
KTKALKDIEKKLNKITKFIEENKEKFTQLDLQDVQVREKLKHAKSKAKKLQKQLQKDKEK
VEELRNVPANSNTEIREATSKKEVLEKEKEREEEKLKQVMDSLKLETQGLQEEKEVKEKE
LMEFNKTVNEARSKMDVAQSELDIYLSRHNTAVSQLNKAKEVLMTTSGTLKERISTIKEL
DTKLPQAEQELKEKECKLEKLGRQELDIKNLVRVQRQKVEAAKSSLAVSRSRGRVLDALL
QQKKSGKIPGIYGRLGDLGAIDEKYDIAISSSCGALDYIVVDTIDTAQECVNFLKRQGIG
VATFIALDKMSEWTQHMSKIQTPENIPRLFDLVEVKDKKILPAFYFALRNTLVANNLEQA
TRVAFQKNKRWRVVTLQGQIIEQSGTMTGGGGKVLKGRMGSSVMVEISEEEINKMELQLQ
NDSKKAVCYQEEKVELEDAIRKLRQSVQEMRSTLEKYTASIQSLSEQEVLLEDQLKELEA
NVIAAAPDKSKQKDLEKNLNAFKKDYECVAGKAGKVESEVKRLHNLIIEINNHKLKAQQD
KLDKINKEIDKYTSAVTKAQVAIKTADRNLKKSEESVLRTEKETGDNEKEIDDLTKTLTT
LEEKATEVMNECKRAEESLPEVQEQHRNLLQAMKSIQEDEHVLQKEALSIRLKIEQIDSH
VAEHQSKIKYWQKEISKISLHHVEAEPVEELPVLNQEELEAIKDPDIIINQIALLEAQCH
EMKPNLGAIAEYNEKEELYLKRVAELDEITNERDNFRQAYEELRKQRLNEFMAGFNIITN
KLKENYQMLTLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKKIFNLSGGEKTLSSLALV
FALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEIADRLIG
IYKTYNTTKSVATNPKVIASKGLAELGAVGCC
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaagagaaccaaaacgtctacagcagcttgtcaaaaaggcaaagagaccatt
gaagaatccaccagtgacatggaaatgggaaaagatgatgcacatcccggtaaactgtct
cagcaagcagccttaaatgaggaacttgctaatcgaagtttagaagaaattttgagtagc
atctctcctcccccaccaccagcaatgaccaatgaagctggagctcctcgcctcatgata
actcatattgtaaaccagaacttcaaatcctatgctggggagcaaattctgggacctttt
cataagcgcttctcatgtattattgggccaaatggcagtggaaaatccaatgtaattgat
tcaatgctttttgtatttggatatcgggcacaaaaaatcagatccaaaaagctctctgtg
ctgatccacaattctgacgaacacaaggacatccagagttgtactgtggaagtacacttt
caaaagatcattgacaaggaaggggatgattatgaagtcattcctaacagcaatttctgt
gtatctagaactgcctacagagataattcttctgtctaccaaatcagtgggaagaaaagc
acatttaaagatgttggtattctacttcgaagtcatggaattgacctggaccataataga
tttttaattttacagggagaagttgaacagattgcaatgatgaaaccaaaaggccagact
gaacatgatgaaggtatgctcgaatatttagaagatctaataggatcaggacggttgaaa
gagcctattcaagttttgtgtcgcagggttgagacattaaatgaacagagaggggagaag
ttaaatagagttaaaatggtagagaaagaaaaggatgccttagaaggagagcgaaacaaa
gccattgaatttcttactttggaaaacaaaatgtttaaggaaaagaatcacatttgtcag
tactacatctatgacctacagaaacggataaatgaaatggaaacacaaaagcaaaaaatt
catgaagagactaaagatgttaatgagaagagtagtaaacttgctgatgaaatgaaagat
aagactaaagccttaaaagatatagaaaaaaagctcaataaaatcacaaagtttatagag
gaaaacaaagagaaattcactcagttggatttgcaagatgttcaagtaagggaaaaatta
aaacatgccaaaagtaaagctaaaaaacttcagaagcaacttcaaaaggataaagaaaag
gttgaggaattaagaaatgttcctgccaacagtaatacagaaatcagagaagcaacatct
aagaaagaagttcttgaaaaggagaaggaaagagaggaggaaaaattaaaacaagttatg
gatagccttaaattggaaacacaaggtcttcaggaagaaaaagaggtcaaagaaaaagag
cttatggaattcaataaaactgtgaatgaagcccgttcaaagatggatgtagctcagtca
gaactggatatctacctcagtcgccataatactgctgtctctcagttaaataaagcaaaa
gaggtactaatgactacttcaggaactctaaaagaaaggatatctactatcaaagagctt
gacacaaaattacctcaagctgaacaggagttaaaggagaaagaatgtaagcttgaaaaa
ctcggaagacaggagttggacattaaaaaccttgttcgggttcaacgtcaaaaagtagaa
gcagcaaagagttctttggcagtcagtcgcagtagaggaagagttcttgatgctctactt
cagcagaagaaatctggaaaaattcctggaatatatgggagattgggagacttgggagct
attgatgagaagtatgatattgctatctcctcatcttgtggtgccttagactacattgtt
gttgatacaatagatacagctcaggaatgtgtgaatttcttgaaaaggcaagggattgga
gttgccacatttatagccttggacaaaatgtcggaatggacacaacatatgagtaaaatc
cagactcctgaaaatattcctcgtctatttgacttagtggaagtaaaagataagaagatt
ctcccagccttttattttgcattacgtaacactttagtagccaacaacttggaacaggcc
accagagtagcatttcaaaaaaacaaaagatggagagtagtaactttgcaaggacaaatc
atagaacagtcaggaacaatgactggtggtggaggtaaagtactgaaggggagaatggga
tcctcagtcatggttgaaatttcagaagaggagataaataaaatggaattgcagctgcaa
aatgattcaaaaaaagcagtgtgctaccaggaagagaaagtagagcttgaagatgctata
agaaaattgcgtcaaagtgttcaagaaatgagaagcactttagaaaagtatacagccagc
atacagagtctatcagaacaagaagttctcttagaagaccaacttaaggaacttgaggct
aatgtaattgctgctgctcctgacaaaagcaaacagaaagacctggaaaaaaatcttaat
gccttcaagaaagattatgaatgtgttgctggaaaggctggtaaagtagaaagtgaagtt
aaaagattacataatctcataattgaaatcaataatcataaacttaaagctcagcaagac
aaacttgataagataaacaaggaaatagataagtatacttctgctgttactaaagcccag
gtggcaatcaagactgcagacagaaatctgaaaaaatctgaggagtctgttcttcgcact
gaaaaggaaactggagataatgaaaaggaaatagatgacctaacaaaaacgctgacgaca
ctagaagaaaaagctactgaagttatgaacgagtgcaaacgagctgaagagtcattacca
gaggttcaggagcagcatcgtaatctacttcaagcaatgaaatcaattcaagaggatgaa
catgttcttcagaaagaggcccttagtataaggcttaaaattgaacaaatagacagtcat
gttgctgagcatcaatcaaagataaaatattggcaaaaggagatatcaaaaatatcactg
caccatgtagaagcagaaccagttgaagaacttccagttctaaatcaagaggaacttgaa
gcaattaaagatccagatattataattaatcaaatagcccttttagaggcccagtgtcat
gaaatgaaaccaaatcttggtgccattgcagaatataatgagaaggaagaactgtacttg
aaacgtgtggcagagctggatgaaattaccaatgagagagacaactttagacaagcttat
gaagagcttagaaaacaaagacttaatgagtttatggctggatttaatataataacaaat
aaactaaaggagaattaccaaatgcttactttaggaggagatgctgaactagagcttgta
gacagtttggatcctttctcagaaggaattgtttttagtgttcgaccaccaaagaaaagt
tggaagaagatatttaacttatcaggaggagagaaaacccttagttccctggctttggtt
tttgctctccatcactacaagccaactccactttatttcatggatgagatagatgcagcc
cttgacttcaaaaatgtgtccattgtagcattttacatatatgagcaaacaaaaaatgca
caatttatcatcatctctctgcgaaataatatgttcgagattgcagatagattaattgga
atttataaaacatacaacacaacaaaaagtgttgcaacaaacccaaaagtgattgcatct
aaaggacttgctgaacttggtgctgttggatgctgctga
DBGET
integrated database retrieval system
