Alligator mississippiensis (American alligator): 102573001
Help
Entry
102573001 CDS
T03087
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain like 1
KO
K04646
clathrin heavy chain
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04142
Lysosome
amj04144
Endocytosis
amj05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102573001 (CLTCL1)
04142 Lysosome
102573001 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102573001 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102573001 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amj04147
]
102573001 (CLTCL1)
Membrane trafficking [BR:
amj04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
102573001 (CLTCL1)
Exosome [BR:
amj04147
]
Exosomal proteins
Proteins found in most exosomes
102573001 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
capSnatchArena
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
102573001
NCBI-ProteinID:
XP_006260171
UniProt:
A0A151MLQ4
LinkDB
All DBs
Position
Un
AA seq
1672 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTVA
LVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNVKPSTLFCFAVRSPAGGKLHIIEVGQPAAGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGAKHGVIYLITKYGYIHMYDLESGVCIYMNRISA
DTIFVTAPHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGSYSEAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRSVMRVSPEQGLQFAQMLVQDE
EPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAANRNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFISGPNNAHIQQ
VGDRCYDERMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFAC
VDGKEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTNAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVSFFA
KVNQLPLVKPYLRSVQNHNNKGVNEALNNLLTEEEDYQGLRASIDAYDNFDNITLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDAELAEKLLQWFLEE
GKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDKLDASESLR
KEEEQVAEPTPIVFGQQLMLTAGPNAVPPQANFPYGYTAPGFTQPPVYGFNM
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcccatacgtttccaggagcacttccagctccaaaacctggggatt
aacccagcaaacattggattcagtaccctgacaatggaatctgacaaattcatctgcatc
agggagaaagtaggagagcaagcacaagttgtgataattgacatgagtgatccaaccact
cctatcagacgcccaatctctgcagaaagtgccatcatgaatccagcttctaaagtaatt
gctttgaaagctgggaagacactccagatctttaacattgagatgaaaagcaaaatgaaa
gcccacaccatggcagaggaagtgatcttctggaaatggatatctgtgaatacagttgcc
ttggtgacagaaactgctgtctaccactggagcatggagggagaatctcagccccagaag
atgtttgacaggcatgccagtctggcaggctgccagattatcaactacaggactgatgaa
catcaaaaatggctgctacttattggaatttcagctcagcaaaatcgtgtcgttggtgca
atgcagctgtactcggttgacagaaaagtctctcaacctattgaaggccatgcagcagcc
tttgcagaattcaaaatagaaggaaatgtcaagccttccacgctcttctgctttgctgtg
aggagtcctgcaggaggcaagctacatataattgaagtgggtcagcctgctgctggaaac
cagccctttgttaagaaagctgttgatgtatttttccctcctgaggcacagacagatttt
cctgtggcaatgcagattggagccaagcatggagttatatacctaatcacaaaatatggg
tacatacatatgtatgacttggaatctggagtgtgcatttacatgaaccgtattagtgct
gacactatctttgtcactgctcctcatgagcctacctctggcatcattggtgtgaacaag
aaaggacaggtgctttcagtttgtgtggaagaagacaacattgtgaattatgctacaaat
gttctccagaatccagacctgggtctgcgtatggcaatccgcagtaacctggctggggca
gaggaactgtttgccaggaagttcaatacactttttgcacaaggaagctattcagaagct
gctaaagtagcagcatctgcaccaaagggcatcctgcgtaccagtgacactatcaggaag
tttcagagtgtgccagcgcaaccagggcaggcctctcctttactgcagtactttgggatc
ttgcttgatcaggggcagctcaataagtttgagtctttagaactctgccgtcctgtcctg
caacaaggccggaagcagttgctggagaagtggctgaaggaagataagctggaatgttcg
gaggagcttggagacttggtgaaggctgctgaccccacccttgcactcagcgtttacctt
cgtgctaatgtgccaaacaaagtcattcagtgctttgcagaaactggccaattccagaag
atagttctttatgccaaaaaggttggctatacaccagactgggtcttcttgttgagaagt
gtaatgagagtcagtccagaacagggtctgcagtttgctcagatgctggtgcaggatgaa
gagccgctagccaacattaaccagattgtagatgtattcatggagaacagtctgatacag
cagtgcacttcctttctgctggatgcactgaaaaacaaccgccctgctgaagggcatctc
cagacccgtctactggaaatgaacctaattcatgcaccccaggttgcagatgccattctt
gggaaccaaatgtttacacactatgatcgtgctcacattgcccagttatgtgaaaaagca
ggcttgctgcagagagccctggaacactacactgacctctatgatatcaaacgtgctgtt
gttcacacacaccttttgaaccctgagtggcttgtgaacttctttggctccctgtcagtt
gaggactctgtagagtgtctgcgtgcaatgctgtctgccaacatcaggcaaaatttgcag
ctgtgcgtgcaagtggcttctaaataccatgagcagcttggcacccagtctcttgtggag
ctcttcgaatctttcaaaagttatgaaggactattctacttcctggggtcaattgtgaac
ttcagccaggatcctgatgtccacttcaaatatatccaagcagcttgcaagactggccag
atcaaggaagtggaaaggatctgtcgtgaaagtaattgctataaccctgaacgagtgaaa
aactttctgaaggaggccaagcttacagaccagcttcctctgatcattgtgtgtgaccga
tttgactttgttcacgatctggttctctacttataccgcaacaacctacagaagtacata
gagatctatgttcagaaggtgaatccaagccgtataccagcagttgttggagggctgctt
gatgtggattgttctgaggatgttattaagaacttgattatggtggttagaggccagttt
tcaacagatgagttggtggctgaagtggaaaaaagaaataggctcaaattgctgctgccg
tggcttgaatctagaattcacgaaggctgtgaagaacctgccacccacaatgctctggcc
aaaatctacattgacagtaataacaacccagagcggttcctccgtgagaatccttactat
gacagccgtgttgtaggcaaatactgtgaaaaaagggacccgcacttggcctgtgtcgct
tatgagaggggccagtgtgatcttgaacttattaaggtttgtaatgagaactccttgttc
aagagcgaggcccgctaccttgtacgtaggaaggatccagaactttgggcaaacgttctt
gaagaaaacaatccattcaggcgacagctcattgatcaggttgttcagacagctttgtca
gagacgcaggatccagaagaggtttctgttacggtgaaagccttcatgactgcagatctt
cccaacgaattaattgaactgctggaaaagatagtattggacaactctgtgttcagtgag
cataggaacctgcagaatctactgatcctgactgccattaaggctgatcgcactcgtgtg
atggaatacatcaatcggttggataactatgatgccccagacattgcaaacatagctatc
agcaatgagctatatgaagaagcctttgccatctttcggaaatttgatgttaacacatct
gcaatacaagtactgatagagcatataggcaaccttgaccgtgcttatgaatttgctgag
aggtgtaatgagccagctgtctggagtcaactagccagagcacagcttcagaaggacttg
gtgaaggaagccattgactcttacataaaggctgatgatccctctgcttacatggaagtg
gttcaggcagctaatagaaataacaactgggaggatctggttaaattcttgcaaatggcc
aggaaaaaggcccgagagtcctacgtggaaactgaactcatttttgccttggcaaaaacc
aaccgcctgtcagagctggaggagttcattagtggtcctaacaacgcccatatacaacag
gttggtgatcgctgctacgatgaaagaatgtatgaagcagccaagctgctctacaacaat
gtatctaactttggtcgtttggcatctaccttggtgcaccttggagagtaccaggcagca
gtagacagtggccgcaaagccaacagtaccaggacatggaaggaggtgtgctttgcctgt
gtggatggaaaagaattccggttggcacagatatgtggcttgcatatagtaatccatgct
gatgaacttgaagagctgattagctactatcaggatcgtggctattttgaagagctaatt
gctctcttggaagctgctttgggccttgagcgtgctcacatgggaatgttcacagaattg
gccatcttgtactccaaattcaagcctcagaagatgagggaacatctagagctcttctgg
tctagagttaacattccaaaggtgctcagagctgctgaacaggctcacctctgggcagaa
ctagtcttcctatatgacaagtatgaagagtatgacaatgcaataatcaccatgatgaac
catcccactaatgcttggaaagaaggacagttcaaagatataattgccaaggtagccaat
gtggagctatattacaaagccctgcagttctatttggactacaaacctctgctgatcaat
gatcttctgctggtgttatctccacggctggaccacaccaggacagttagcttctttgca
aaggtaaatcagctgcctctagtgaagccttacttgcgctcagtccagaaccacaacaac
aaaggagtcaatgaggctctaaacaaccttctgacagaagaggaggactaccagggtttg
agagcttctattgatgcttatgacaactttgataacatcacactagctcagcgtctggag
aagcatgaactgatcgaattcaggcgtattgcagcttacttgtacaagggaaacaatcgc
tggaaacaaagtgtggaactctgcaagaaggatcgtctctacaaggatgctatgcagtat
gctgcagagtctaaagatgcagagctggcagagaaactgctccagtggttcctggaagaa
ggcaagcaagaatgttttgcagcttgtctcttcacatgctatgacttgctgcatccagat
gtagtccttgagttggcctggaggcataacatcatggactttgcaatgccttatttcatc
caggtgatgagggaataccttaccaaagtggataaacttgatgcttctgaaagcctaagg
aaagaagaggagcaagtagctgaacccactccaatagtatttggccagcagctgatgcta
acagcagggccaaatgcagtacctccccaggcaaacttcccttatggatacacagcacca
ggattcactcagccacctgtttacggcttcaatatgtaa
DBGET
integrated database retrieval system
