Alligator mississippiensis (American alligator): 102573051
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Entry
102573051 CDS
T03087
Symbol
POLR1A
Name
(RefSeq) RNA polymerase I subunit A
Organism
amj
Alligator mississippiensis (American alligator)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
DUF787
Motif
Other DBs
NCBI-GeneID:
102573051
NCBI-ProteinID:
XP_006271549
LinkDB
All DBs
Position
Un
AA seq
1716 aa
AA seq
DB search
MAPLREVPWRRLSEISFGMYTAEELRKLSVKAITNPRYLDNVGNPAANGLYDLSLGPPDA
REACTTCMQDFDSCPGHFGHIDLPLTVYNPLFFDKLYFLIRGSCLNCCLLTCTRAVVHLL
LSQLKVLEKGLLHAVYDLEAVLNRFLDENADATGLEIEEELSRHVNEILQNNQLGDQCSN
VKNVCECRSKLIAQFWKSHMTSKRCPNCQAKRSLVRKEHNSKLTVTYPTVVRQKSGKEAI
LEQPAIIDESHMGKRGYMTPISAKEHVTALWKNEGFFLSHLFSGLEVGENSGFSPDMFFL
DLVMVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDVQLIRKLLAFMAQEQSQSIKIGESE
VQEEINEPLEPLDHSILATIPGQSTADKLYNIWVRLQSHVNIVFDSDMDKLITDKYPGIR
QILEKKEGLFRKHMMGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNIK
ELRQAVINGPSVHPGASMVINEDGSRTILSTTSQTQRESIAKQLLTPPTGAPKSAMKIVC
RHVKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFP
QSELGRAEAYTLACTDEQYLVPKDGKPLAGLIQDHMISGASMTIRGCFFTKEQYMELVYR
GLTDKKGRVKILPPAIMKPQELWTGKQVVSTLLINVIPESHIPLNLSGKAQIGAKAWVKG
PANRILGLNSMCESQVVIREGELLCGVLDKAHYGSSAFGLVHCCHEVYGGETSGKVLTCL
ARLFTAYLQLYRGFTMGVEDILVKPRADHKRGKIIEESTYCGTKAVRAAFNLPETTSCEE
VQGKWQDAHLCKDQRDFNMVDLKFKEEVNNYSNEVNKVCMPLGLHRSFPENNLQLMVQSG
AKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPRSGGFVTGRFLTGIKP
AEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGE
DGLDIPKTPFLQPKQFPFIADNYEVIEKSKHLDEALSRMDPHQAGQQFRAIKKWQAKHQG
SLAREGAFLLFTQKKMASLREQISEGETKHGRGPAAQQLLSMWYELDEKKRRKYLKKTSK
CPDPSLAVWRPDIHFASVSETFEVAVENYISEWEAQNNRNYVKSNLSYDRLKNLLYLKWQ
RSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMIASANIKT
PMMSVPVLNTKKAQKRVKRLKKQLTRVYLADVLQNIEIEESLCIEGRQSKHRRYQIRFHF
LPRESYREEKCVKPRDILHFMETRLFKIMLETVKRKSTKMASFTAVNTRKVTQRDLDRDD
GATQANQVQDDNEAEAEEEGRPVDGEAEEGDADATDAKQKEKQEEEVDYESEEEVNEENG
DENSEDEEGPSLDDKRTEESEEGSNVLYHEEDSQFSSSSSLSKKEKTPTQNASVELRVSS
VVSSHPSIENYVYDVENELWCEVSLKLPLTKAYFDLSSFLESLMQNTVVHETKGITRCFL
NESTNKKGERELILNTEGINLSELFKYSDVLDLSRLYSNDIHAMAKTYGIEAALRVIEKE
IKDVFAVYGIVVNPRHLSLVADYMCFEGVYKALNRYGIQSSSSPLQQMTFETSYKFLKEA
TMMGAHDELRSPSACLVVGKVVKGGTGLFDLKQPLT
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctccgagaggtgccgtggcggcggctgtccgagatctccttcgggatgtac
acggccgaggagctcaggaaactaagcgtgaaagccatcaccaacccgcgctacctggac
aatgtggggaatcctgccgccaatgggctctacgacctgtctctgggcccgccggacgcc
agagaagcctgcaccacctgcatgcaggacttcgacagctgcccagggcacttcggccac
atcgatcttccgctcactgtctacaacccgctcttcttcgataaattatactttctcatc
cgtggttcttgtttaaactgttgcttgctgacgtgcacccgagcagtggttcacttacta
ctaagccagctgaaggtcctggagaaagggttgcttcatgccgtttatgatcttgaagct
gtcctgaataggtttttagatgaaaatgcagatgcaactggtctggagattgaagaagaa
ttaagccgccacgtgaatgaaatactacaaaacaaccagctaggagatcagtgttcaaat
gtaaaaaatgtatgcgagtgtaggagtaagctgattgcacagttctggaaatcacacatg
acttcaaagagatgcccaaactgccaagctaaaagatcactggttcgaaaagagcataac
agcaagttgacagttacctatcctactgtggtacgtcagaagtcaggcaaggaggccatc
ttggaacaaccagcaatcatagatgagtctcatatggggaaaagaggctacatgacacct
atcagtgccaaagagcatgttacagctctgtggaagaatgaaggtttctttctgagtcac
ctcttttcgggtctggaagttggtgagaattcaggattcagtcctgatatgttcttcctt
gaccttgttatggttccaccttcaagatatcgtcctgtgaatcgcttgggagaccagatg
ttcacaaatggtcagacggtaaatttgcaggctgttatgaaagatgtccagttgataaga
aagcttttggctttcatggctcaggaacaaagtcaatcaataaaaatcggagagagtgaa
gtccaggaggagataaatgagccgttggaaccactggaccattccatcctggcaacaatc
ccgggacaaagcactgcagataaactctacaatatttgggttcgccttcagagccacgtc
aatattgtatttgatagcgacatggacaaactaattacagacaaataccctggcatccgt
cagatactggagaagaaggaaggtctgttccgcaaacacatgatgggaaaacgtgtggat
tacgctgctcggtcggtcatttgccccgacatgtacattggcacgaatgagattggtatc
cccatggtatttgctaccaaattgacttatcctcaaccagtaacgccatggaacatcaaa
gaactgaggcaggctgttataaatggtcccagtgttcaccctggagcctccatggtcatt
aacgaagatgggtctcgcacgattttgagcacaaccagccagacacagagagaatccata
gccaagcagcttctcactcctcccactggtgccccaaagtcagcaatgaaaatagtgtgc
cgccatgttaaaaatggagatgtcctcttactgaaccgtcagcctacccttcataggccc
tctatccaagcccaccgcgccagaatcctgcctggagagaaggtgctgaggcttcactat
gccaattgcaaagcctacaatgctgactttgatggtgatgaaatgaatgctcattttcct
cagagtgaattgggccgagctgaagcgtacaccttagcctgcaccgatgagcagtatctt
gttcccaaggatggcaaaccgctggcgggattgatccaggaccacatgatctctggtgcc
agtatgacgattcgaggctgctttttcacgaaggagcagtatatggagctggtctatcga
gggctgacagacaaaaaaggaagagtaaaaattcttccacctgccatcatgaaaccacaa
gagttatggacaggaaaacaggttgtttctacgttgctaataaacgtaatcccagaaagt
cacatcccgctgaatttgtccgggaaagctcagattggggcaaaagcctgggtgaaaggg
cctgcgaacaggattcttgggctgaattcaatgtgtgaatctcaggttgtcatcagagaa
ggggagttactttgtggggtcttggacaaggcacactatggcagctctgcttttggcctg
gtccactgttgccatgaagtttatggtggtgaaaccagtggcaaggtgcttacctgtcta
gctcgcctcttcactgcctacctgcaactctacaggggatttacaatgggggttgaagat
attttggtcaaaccccgagcagaccacaaaagaggtaagattattgaagagtcgacctac
tgtggtaccaaggctgttagagctgcctttaatttgccagaaacaacatcatgtgaggag
gtgcaagggaaatggcaggatgctcatctctgcaaagaccagagggattttaatatggtt
gatcttaaattcaaggaggaagtaaacaattacagcaatgaggttaacaaggtttgtatg
cctcttggtctccataggagcttcccagagaacaatttgcagctaatggtgcagtcagga
gccaaaggatccactgtaaatacaatgcagatttcctgcttgctgggccagattgagttg
gaaggacgaaggcccccactaatggcatctgggaaatcattaccttgttttcagccttat
gatttttcccctagatctggaggatttgtgactggcagatttctcacgggcatcaagcct
gctgagttcttctttcactgcatggctggcagagaaggtctggtggacacagcagtcaaa
accagtcgatctggttatctccaaaggtgtatcattaagcacttggaagggctggtggtt
cagtatgatctgactgtgcgggacagcgatggcagtgtggtgcagttcctatatggtgaa
gatgggcttgatattcctaagactccattcctgcaacccaagcagtttcctttcattgca
gataactatgaggtgatagagaagtctaagcacttggacgaagctttatccaggatggat
cctcatcaagcaggtcaacagttcagagccatcaaaaaatggcaagccaagcaccaaggc
tctttggcaagggaaggagccttcctgctgttcacgcagaaaaaaatggcaagtttaaga
gaacagatctctgaaggggagaccaaacatggcagaggtcctgctgctcagcagttactg
agcatgtggtatgaactggatgagaagaaacggagaaaatatttaaagaagacctccaaa
tgtcctgatcccagccttgctgtctggcgtccagatattcattttgcctctgtttcagaa
acatttgaagtggcagtagagaattatatcagtgaatgggaagctcagaacaacagaaac
tatgtaaaatcaaacctttcttatgatagactgaagaacttgctgtatttaaagtggcag
cgatccctgtgtgacccaggagaagctgtgggcctacttgctgctcaaagcattggggag
ccttctacacagatgactctgaacacttttcattttgctggcagaggtgaaatgaatgtc
acgctgggtatcccaaggttacgagagatcctcatgatagccagtgcaaacattaaaaca
ccaatgatgagtgtgcctgtgctcaatactaagaaagctcaaaagagggtgaaaagactt
aagaaacagcttacaagagtgtacctagctgatgtcttgcagaacattgaaattgaggag
tctctgtgcatagagggcagacagagcaagcatcgtcgctaccaaatcagatttcacttc
ctgccacgtgaaagctatcgggaggagaagtgtgtgaagccaagggatatcttacacttc
atggagacccggttatttaaaatcatgcttgaaacagttaaaaggaagagtacaaagatg
gcatctttcactgcagtcaacactcggaaggtgactcagagggatctagatagagatgat
ggagcaacccaagcaaaccaggtacaggatgataacgaagctgaggctgaagaagaaggg
aggcctgtggatggtgaagctgaagaaggggatgctgatgctacagatgcaaagcagaag
gaaaagcaggaagaagaggttgattatgagagtgaggaagaggtgaatgaggaaaatggt
gatgaaaattcagaagatgaagaaggtccctcgcttgatgataaaaggactgaggagtct
gaagaaggttcaaatgtattataccatgaggaggattctcaattttcttcctctagttcc
ctgtctaagaaagagaaaacacccacacaaaatgcatcggtagagctaagagtcagttct
gtagtaagcagtcatccctccatagagaattacgtatacgatgttgaaaatgagctctgg
tgtgaggtttcactgaagcttcctctgacaaaggcatactttgatctctcctccttcctg
gagtcacttatgcaaaatacagtcgtccatgagacaaaggggatcacgcgatgtttctta
aatgaaagcaccaacaagaaaggagagagagagcttattttgaacactgaaggaataaac
ctctctgaactgtttaaatattctgatgttttggacttaagcaggctttattccaatgac
attcatgcaatggctaaaacttacggaatcgaggctgccctgagggtgattgaaaaggaa
attaaagatgtatttgccgtgtatggtatcgtggtgaacccccggcacctttctcttgtg
gcagattacatgtgttttgaaggtgtttataaagcactgaatcgctatggaatacagtcc
agctcctcaccactgcagcagatgacatttgaaaccagctacaaattcttaaaggaagca
acaatgatgggtgcccacgatgaactgagatctccttctgcttgccttgtggttggaaaa
gttgtcaaaggagggactggtttgtttgacctcaagcaacctcttacatag
DBGET
integrated database retrieval system
