Alligator mississippiensis (American alligator): 102573095
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Entry
102573095 CDS
T03087
Symbol
DHX36
Name
(RefSeq) DEAH-box helicase 36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102573095 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102573095 (DHX36)
03012 Translation factors [BR:
amj03012
]
102573095 (DHX36)
Enzymes [BR:
amj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102573095 (DHX36)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102573095 (DHX36)
Translation factors [BR:
amj03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102573095 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
NPHP3_N
PhoH
NACHT
Sir1
ABC_tran
Motif
Other DBs
NCBI-GeneID:
102573095
NCBI-ProteinID:
XP_006263941
UniProt:
A0A151NB11
LinkDB
All DBs
Position
Un
AA seq
991 aa
AA seq
DB search
MSYEHRRGWGRGRGGSGGGGGGGSSRPSSSEAGYGGRGGGGGGGRGRHPGHLKGREIGLW
YARKHGQRSKEADRQQRAVVQMDEHREEQIVQLLNTVQTRNEKEQEAMSWWSGEEEGPDQ
VEQVKEKPTLEKVPIKHRPNLERTFLDRDAEFLFQKNEPDIDLDEQFREELRKKKSDSRY
IEMQRFREKLPSYGMRRELVNVINNNQVTVISGETGCGKTTQVTQFILDDYIERGKGSAC
RIVCTQPRRISAISVAERVATERAEVCGNGKSTGYQIRLQSRLPRKQGSILYCTTGIILQ
WLQSDKQLSSVSHVVLDEIHERNLQSDVLMTVIKDLLNVRSDLKVILMSATLNAEKFSEY
FDNCPMLHIPGFTFPVVEYLLEDVIEKLRYMPENTDRRPRWKKGFMQGHISRPEKEEKEE
IYRERWPDYLKQLQGRYSTSTIAALESMDDDKIDLDLIAVLIRYIALEEEDGAILVFLPG
WDNISTLHDLLMSQVMFKSDRFVIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETS
ITIDDVVFVIDGGKIKETHFDTQNNISTLAAEWVSDANAKQRKGRAGRVQPGHCFHLYNG
LRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAHFLSKLMDPPSHDAVMLSINHLMEL
NALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGK
EKVADARRKELSKNTKSDHLTIVNAFTGWEEARRRGFRNEKDYCWEYFLSSNTLQMLHNM
KGQFAEHLLAAGFVNSKDPKDPKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMV
KVCTKPDGTVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDI
SIQKDNDQDTIAVDEWIVFQSPARIAQLVKNLRSELDDLLQEKIENPHPVDWNDTKSRDT
AVLTAIIDLITTQENESARNFAPRFQNERYS
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcaccgcaggggatggggccgcggccgcggcgggagcgggggtggaggt
gggggcgggagctcccggccttcctcctccgaggcgggatacggaggccgagggggcggc
ggcggcggcggccgggggcgacatcccgggcacctgaagggccgcgagatcgggctgtgg
tacgcgcggaagcacgggcagagaagcaaagaggctgacaggcagcagagagctgtggtg
caaatggatgaacatcgtgaagaacagatcgtgcagctgctgaatactgtccagactaga
aatgaaaaagaacaggaagccatgtcctggtggtcaggcgaggaagaaggacctgatcaa
gtggagcaagtaaaagagaaaccaaccttggaaaaggttcctataaaacatagaccaaac
ttggagagaacattcctagatcgggatgcagaatttctttttcaaaaaaatgagccagat
attgatttagatgagcaatttagagaagaattaagaaagaagaaatctgattcaagatac
attgaaatgcagaggttccgagaaaaattgccttcatatgggatgagaagggaactagta
aacgttataaataataatcaggtaactgtgataagtggtgagactggttgtggaaagacc
acacaagtaactcagttcattctggatgactatattgagagaggaaaagggtctgcttgc
aggattgtgtgcacacaaccaaggaggatcagtgccatctcagttgcagagagagttgcc
actgaaagggcggaagtatgtggtaatgggaagagtacaggataccaaattcgcttgcag
agtcggttgccaaggaaacaaggttccattttgtactgtacaacaggaatcatcttacag
tggcttcaatcagacaagcaattgtccagtgttagtcatgttgtccttgatgaaatccat
gaaaggaatcttcagtcagatgtcttaatgactgttattaaagatctcctaaatgttcgt
tcagacctgaaagtaatactgatgagtgctactttgaatgcagagaaattttcagaatat
tttgacaattgtcccatgcttcatatacctggattcacttttcctgtagtggaatatctt
ttggaagatgtcattgaaaaattaaggtatatgccagaaaacacagatcgcagacctcgc
tggaaaaagggcttcatgcaggggcacataagcagaccagaaaaggaagaaaaagaggaa
atctatagagaacgttggccagattatctaaagcagcttcaaggaaggtattcaacaagt
actatagctgctttggaatcgatggatgatgacaagattgaccttgacctcatagctgta
ctcatccgatacattgccttagaagaagaggatggtgcaatattggtgtttctcccaggc
tgggacaacattagcactttacatgatctcttgatgtcacaagtcatgtttaaatcggat
agatttgttatcatacctctccactctttgatgcctactgttaatcagacgcaggttttt
aaaaagacccctcctggagtacggaaaattgtaattgcaaccaacatagcagagaccagc
attaccatagatgatgttgtgtttgttattgatggaggaaaaataaaagaaactcatttt
gacacgcagaacaacattagcaccctggctgctgagtgggttagtgatgctaatgccaag
caaaggaaaggccgagcaggaagagtccagcctggtcactgttttcatctatacaatggt
ctacgtgccagtcttctagatgattatcagttaccagaaatcctgaggacgcctttggaa
gaactctgtctacaaatcaagattttaaagcttgggggaattgctcattttctaagcaaa
ttaatggatccaccatctcatgatgctgtaatgttgtccataaaccacctaatggaactg
aatgctttggatagacaagaggaactgactccactaggtgtccatttggcacgattgcca
gttgagccgcatattggaaaaatgattctctttggagctttattctgttgcttagatcct
gtgctcacaattgcagccagtctcagcttcaaggatccctttgtcattccactgggcaaa
gagaaagtagcagatgcaaggagaaaggaactctcaaagaacactaaaagtgaccaccta
accattgtgaatgctttcacaggctgggaagaggctcggcggcgtggcttccgaaatgaa
aaagactactgctgggagtattttctgtcttcaaatacactccagatgctgcataatatg
aaagggcaatttgctgaacatctcctagcagctgggtttgtgaatagtaaagaccccaaa
gatccaaaatctaataccaactcagataatgagaagttgctcaaggcagtcatctgtgct
ggtttatatccaaaagttgcaaagatccggccaagctttagcaagaagcgaaaaatggtt
aaagtttgtaccaagccagatggaactgttaacattcatcctaaatctgttaatgtggaa
gaaactgagttccattataactggctcgtttatcatctgaagatgagaaccagcagtatt
tacctctatgattgtacagaagtctctccatactgtctcttgttctttggaggagatatt
tccattcagaaggataacgatcaggatactattgctgtggatgaatggattgtctttcag
tctcctgcaaggatagcccaactagtcaagaatttaagaagtgaactagatgaccttctc
caagagaaaattgaaaacccgcaccctgtggactggaatgacactaaatccagggacaca
gcagtcctgacagccattatagacttaatcacaacacaagagaatgaaagtgccagaaac
tttgctcctcgatttcagaatgaacgttatagttga
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