Alligator mississippiensis (American alligator): 102573108
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Entry
102573108 CDS
T03087
Symbol
RBBP6
Name
(RefSeq) RB binding protein 6, ubiquitin ligase
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102573108 (RBBP6)
Enzymes [BR:
amj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102573108 (RBBP6)
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
U-box type E3
102573108 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
102573108
NCBI-ProteinID:
XP_014453313
LinkDB
All DBs
Position
Un
AA seq
1710 aa
AA seq
DB search
MTSKSHKILETTFRSRTEPVSGPSKAIDDSSASISLAQLTKTANLAEANASEEDKIKAMM
SQSGHEYDPVNYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDKNFESVPRIKKSTGIP
RSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLPEEPSSSSEEDDPIPD
ELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDDHTCPTCHQTDVSPDALIANKFL
RQAVNNFKNETGYTKRLRKQMQQPRPAVQRNMQPVVRPTVSRQQDPLMIPVTSPAHSAAS
LTSSLTSSQSSASATMSANPSSGPGAAADLSISLRSEKPDGPFRGRGGDAAGGVAAHRTR
QERRPLRDADSVIPPAAIVTASEHSKTSSSLSISTVMEEKVKGYQVPVLGQPALPGQLAS
QGQSIPTTGQPIRGSLVRSSGSRPGWEPSSNRGRPHSERTQRTQAPTLPASTPVFVPVPP
PPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPPAGYPVPPPGYPPAPANISTPWVPTAVP
SAHSNAIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRR
SFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKS
RNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPIFRGQSPTKRAVPQGEGEREYFNRYREV
PPYDIKAYYGRSVDFRDPFEKERYREWERNYREWYEKIYKGYAAGAQPRPPVNRENFSPD
RFGPPGARRENSPYARGRRDDYAAGQSHRNRNIGGNYPEKPGREGHNVKDPAKPKEKEGE
NPLGDGKGNKHKKHRKRRKGDENEGFPNAELLEGARKPREPPAGGEEIKPDSLFVLPSRD
DATPVRDEPMEADSITFKPVSEKEKKEKDKPKAKVDKTKRKPEVAATAKKESVVKPAKAP
QDKTETEREKSPRTDPLAKKTKDDLPKPDSIKASSSQKDEKALGTPRKVHPKTAKEHPET
RPAKEEKAKKDHPKEVKPEKTSSKEEKTKKPVEKSKPSDVKPEKRKRKAEEKVDKEHETT
LKTSKPEVAEVKPSPKGKADPDGEKAERTPEKDKAASLLAPAKKIKLNRETGKKIVSGEN
VPPAKEPAEKPEPTSSKVKPEKVKGKVRRKVTAADGSGSTLVDYTSTSSTGGSPVRKSEE
KQDTKRTVIKTMEEYNNDITAPAEDVIIMIQVPQSKWDKDDFESEEEDVNSTQVPSNVVK
PSSVVKNVSAKSPNPLKHTEKESESLEKTQKTTKEASYESSQHEAKSSKNSVSSEKGKTK
DRDHSSSDKDASEKRKSNVQPEKDNSERGAEQGNLKNPPSSKDSRSSDKHDTGRGSSVKD
FTPSRDKKSDYDSSRDHSSSKRRDEKNESTRRKDSPSRNRESTSGQKSKPRDERTDLSKK
GSGDSKRSNHSPPRDSRRPYDHKTGHDSKRSSEEHKSSDKSSAKEREKHTSETKSNKERE
SSGNKSSHRHASPDTKNEKEHAAGQSDKSAVKPKPQLSHSSRLSSDLTRETDEAAFVPDY
NESDSESNVSAKDESIGKNAKELKEKAVEKVKETVPAAAVGQPDVSRSQSQSSPSVSRSR
SHSPSGSQTRSHSSSVSSAESQDSKKKKKKKDKKKHKKHKKHKKHKKHTGNESELEKSQK
HKHKKKKSKKSKDKEKEKEKDDQKVKSVTV
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atgacttctaaatcgcacaaaatcctagaaactactttcagaagtcgaactgaaccagtg
agtggaccatcaaaagcaattgatgactcttctgcatctatttctctggcccagctaaca
aagactgccaatctggctgaagccaatgcttccgaagaagataaaataaaagctatgatg
tcacagtctggccatgaatatgatcccgtcaattacatgaagaaacccttgggcccacct
ccaccatcatacacatgctttcgttgtggaaaacctggccattacataaagaactgccca
acaaatggggacaaaaattttgagtcggttcccaggattaaaaagagcacaggaattcct
agaagttttatgatggaggtgaaggatcccaatacaaaaggagccatgcttacaaacaca
ggaaaatatgcaataccaacaattgatgcggaggcttatgccataggaaagaaggaaaag
cccccttttctaccagaggagccatcttcctcttcagaagaggatgatcctattccagat
gaattgttgtgtctgatctgcaaagatataatgactgatgcagttgtcattccctgctgt
ggaaacagttattgtgatgaatgtatcagaacagcactactggagtcagatgaccatacc
tgtccaacttgtcatcagacagatgtttcccctgatgctttaattgccaacaagttctta
cgccaggctgtaaacaacttcaaaaatgaaaccggctacaccaaaaggctccgtaagcag
atgcagcaaccaagaccagcggtccagcggaacatgcaacctgtagtgaggccaacggtt
tccagacaacaggatcctctaatgattccagtaacttcacctgctcattctgctgcttct
ttgacatcatcgttgacttctagtcagtcatctgcatctgctactatgtcagcaaatccg
tcttctggacctggagctgctgctgatctgtccatatctcttcgctctgaaaagccagac
ggaccttttcgcgggaggggcggtgatgcggcaggaggggtggcggcgcaccggacgcgg
caggagaggcggcctctcagggatgcagatagtgttatacctcctgctgctattgtgaca
gcctcggagcattcaaaaacttcttcctctctctcaatcagcactgtgatggaagagaaa
gtaaagggctaccaggttcctgtactaggacagccagcattaccaggccagcttgcttca
cagggacagtcaatacccactactggtcagccaataagaggcagtctggttcgttcttca
ggcagcaggccaggctgggaaccaagttcaaatcgaggacgcccgcatagtgaacgtaca
caaaggactcaggccccaacattgccagcatcaacaccagtctttgtgcctgtgccgcca
cctcccctgtatccgccacctccccacgcacttcctcttccaccgggggtaccaccacca
cagtttcctcctcagtttccacctggtcaacctccacctgccgggtaccctgtcccccct
ccaggataccccccagctcctgcaaacatatcaacaccttgggtaccaacagcagtacca
tcggctcattcaaatgccatcccaacgacacaagcgcctcctttatctagggaggagttt
tacagagagcagcggagacttaaagaggaggaaaagaaaaagtccaaacttgatgagttt
acaaatgattttgctaaagaattgatggaatataaaaagattcaaaaggagcgtaggcgt
tcattttccaggtccaagtctccgtatagtgcttcatcttactctagaagttcgtatacg
tactccaagtcaagatcaggttcatctcgctctcgttcgtattctcgatcatttagtcgc
tcccattctcgctcctactcacggtcacctccgtacccacggagagggagggggaagagt
cgtaactatcgttctcgatcaaggtcccatggatatcaccgttcaagatcaaggtcaccc
ccgtatagaagatatcattcacgttcaagatctccaatatttagaggtcaatctcccact
aagcgggctgtaccccaaggggaaggggaaagagagtattttaaccgatatagagaagtc
cctccatatgacattaaagcctactatggcaggtctgttgatttcagagatccatttgaa
aaggaaagatacagagaatgggaaagaaactatagagaatggtatgaaaagatttataag
ggctatgctgctggagcccagccgagacccccggtaaatagagagaacttttctccagat
cggtttggtccaccaggagctagacgagagaattccccatatgctcggggtcgtagagac
gattatgctgctggacagagccatagaaatcgtaatataggtggcaattatcctgaaaaa
cctggaagagaaggccataatgttaaagatcctgcaaaaccgaaggaaaaggaaggtgaa
aaccccttgggagatggcaaaggaaataaacataaaaagcaccggaagaggaggaaagga
gatgagaacgaaggctttcctaatgctgagctgctggaaggtgcgaggaagccgagagag
ccacctgctggaggcgaagaaattaaacccgactcactgttcgtgctcccaagcagggat
gatgccacgccggtcagggatgaacctatggaagccgattctattacttttaaaccagta
tctgaaaaagagaaaaaagagaaagataagcctaaagcaaaagttgacaagacaaagcgg
aaaccagaagttgctgccactgctaagaaagagagtgtagtaaaaccagctaaagcaccc
caggataaaaccgagactgagcgtgaaaagtctcctcgaacagaccctctggcgaaaaaa
acaaaggatgacttgccaaagccagacagtattaaagcatcttcctcccaaaaggatgag
aaggcactgggcacgccacggaaagttcatccaaaaacagcaaaagagcatccagaaacc
agaccagccaaggaggaaaaagcaaagaaggaccatccgaaagaagtcaagccggagaaa
acgtcaagcaaagaggaaaagacaaaaaagcctgtggaaaaaagcaaaccttctgatgta
aaacctgagaaaagaaaaagaaaggcagaagaaaaggtagataaagaacatgaaaccact
ttaaaaacgtcgaaaccagaagtggctgaagtgaaaccgtcacccaagggaaaagctgac
cctgatggtgagaaagcagagcgaacccctgaaaaggacaaagctgcttctctgcttgcc
ccagcaaaaaagattaagcttaacagagagacaggcaaaaagattgtcagtggagaaaat
gtacctcctgcaaaggaacctgctgagaaacctgagccaaccagtagcaaagttaaacca
gaaaaggttaaaggaaaagtgagaagaaaagtaacagcagctgatgggtctggttcgact
cttgtggattacaccagtactagctctactggaggcagtcctgttagaaagtctgaagaa
aagcaagacacaaaacggactgtcattaagaccatggaagaatataataatgatataaca
gcccctgcagaagatgtcattattatgattcaggttcctcaatcaaagtgggataaagat
gactttgagtctgaagaggaagacgttaactctacacaagtaccttcaaatgtagtaaaa
ccctctagtgttgtaaaaaacgtgagcgctaagtccccaaatcctctgaaacacactgaa
aaagaatctgagtccttggaaaaaacacagaaaactacaaaagaagcaagttacgaaagc
tcccagcacgaagcaaaaagctcaaaaaactctgtgtcaagtgaaaaagggaaaaccaag
gaccgggatcattcttcatcagacaaggacgcctcggagaaacggaaaagcaatgttcaa
ccggaaaaagacaactctgaacgtggggctgagcaaggaaacctaaaaaatcctccatca
tccaaagacagcagatcctcagataagcatgatactgggcgtggatcctctgtgaaagac
tttactcctagcagggacaaaaaatctgattatgatagcagccgggatcattctagttcc
aagcgtagggatgaaaagaatgagtccacaaggagaaaggactctccttctcgaaacagg
gagtcgacctcgggtcagaaaagtaaaccgagagatgaaagaacagacttatccaaaaag
ggatcgggagattctaaaaggagcaaccatagtcctccaagagacagcagaaggccatac
gatcacaaaactggccacgattccaaacgctcatcagaagaacacaaatcttcagacaaa
agttcagctaaagaaagggagaaacacacatcagaaacaaagagcaataaggagagagag
tcaagtggcaataaatcatctcacagacatgcatcgccagatacaaaaaatgaaaaagag
catgctgctgggcaaagcgacaagagcgccgtcaaaccgaagcctcagttaagccactcc
tctcgactctcttccgacttaaccagagaaactgacgaggctgcgttcgtcccagactac
aacgaaagcgacagcgagagcaatgtgtctgcaaaagatgagtctataggaaaaaatgct
aaagaactgaaagaaaaggcagtggagaaggttaaagagactgtacctgcagcagcagtt
ggtcagcctgatgtaagcagaagtcaaagtcaaagcagtcccagtgttagccgcagccgt
agtcacagcccttctggaagccaaactcgaagccacagcagcagtgttagctcggctgag
agtcaggacagcaagaaaaagaaaaagaagaaagacaaaaagaagcacaagaagcacaaa
aaacacaagaagcataagaaacacactggaaacgagtctgaattggagaaaagccaaaaa
cacaaacacaagaagaagaaatccaagaagagcaaagataaagaaaaagagaaagagaaa
gatgaccaaaaagtgaaatctgtcactgtataa
DBGET
integrated database retrieval system
