Alligator mississippiensis (American alligator): 102573166
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Entry
102573166 CDS
T03087
Symbol
SSRP1
Name
(RefSeq) structure specific recognition protein 1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102573166 (SSRP1)
03036 Chromosome and associated proteins [BR:
amj03036
]
102573166 (SSRP1)
Transcription factors [BR:
amj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
102573166 (SSRP1)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
102573166 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
DUF6694
bPH_2
Motif
Other DBs
NCBI-GeneID:
102573166
NCBI-ProteinID:
XP_006261474
UniProt:
A0A151NVK5
LinkDB
All DBs
Position
Un
AA seq
705 aa
AA seq
DB search
MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELSEGVWRRVALGH
GLKLITKNGHVYKYDGFRESEFDKLSDFFKSHYRLELAEKDLCVKGWNWGTVRFGGQLLS
FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQATQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGHKEDIKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDESGEETDE
SFNPGEEDDDVAEEFNSHPSASSSSGDGDSDRDEKKPAKKAKIVRERKPRKKQLEGKKSK
DPDAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGELWKAMSREKKEVWERKAED
AKRDYEKAMKEYSVGGKSESSRTEKSKKKKKKQEKQVKGKVEKKGVSSKSPSSKSPVKPT
TESFKSKEFVSSDESSSGESKKEDSEEEEIASTPPSSEDSASGSD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacgctggagttcaacgagatctaccaggaagtgaaagggtccatgaatgat
gggcggttgcgcctgagtcgccaaggtgtgatcttcaagaacagcaagacaggcaaagtg
gacaacatccaagcttcggagctgtcggagggtgtctggcgccgtgtggcgctgggccat
ggtctcaaactgattaccaaaaatggccacgtctacaagtatgatggtttcagggaatcg
gagtttgacaaactctcagatttctttaaatcgcactatcgcctggaactggcagagaag
gacctgtgtgtgaaagggtggaactggggaactgtgcggtttggaggccagcttctctcc
tttgacattggggagcagccagtgtttgagatccctctcagcaatgtgtcacagtgtaca
acgggcaagaatgaagtgacgttggagttccatcaaaatgacgatgctgaggtgtccctc
atggaggtgcgcttctacgtccctcccacacaggaggacggtgtggaccctgtggaggcg
tttgcccagaacgtgctctccaaggcagatgtcatccaagcaactggggacgccatctgc
atattccgggagttgcagtgcctgacgccacgtggtcgctacgatattcgcatttacccc
acttttctgcatctgcatggcaagacctttgactataagattccctacaccactgtgctg
cggctcttcctgctgccccacaaggaccaacggcagatgttttttgtgatcagcttggac
cctccgataaagcagggccagacgcgctaccacttcctgatcctgctgttctccaaggat
gaggacatctctctgactcttaacatgaatgaggaggaggtggagaagcgatttgagggc
cggctcacgaaaaatatgtccggctccctgtacgagatggtcagccgggtcatgaaagcg
ctagtgaaccgcaagatcactgtacctggcaacttccaggggcactcaggggcccagtgc
atcacctgctcctacaaggccagctcagggctgctgtacccactggagcgtgggttcatc
tacgtgcacaagccccctgtgcacatccgctttgacgagatctcctttgtcaactttgcc
cgtgggaccactaccacccgctcctttgactttgagattgagaccaagcaggccacacag
tacaccttcagcagcatagaacgggaagagtatgggaagctttttgactttgtcaatgcc
aagaagctgaacatcaagaaccgaggacacaaggaggacatcaagcagagctacgatgaa
tatgctgattcagatgaggaccagcatgacgcctacctggagaggatgaaggaagagggc
aagatccgtgaggagaatgccaatgacagcagcgatgagtctggggaagagacagatgag
tcattcaaccctggggaggaggatgatgatgtggcagaggaattcaacagccatccctca
gccagctcctctagtggtgatggtgacagtgaccgtgacgagaagaaaccagccaagaag
gccaagattgtcagggagcgcaaacctcgcaagaaacagttggagggtaagaaaagcaag
gaccccgatgcccctaagcggccaatgtctgcctacatgctctggctaaatgctagtcgt
gagaagataaaatcagaccaccctggcatcagcatcactgacttgtccaagaaggctggg
gagctctggaaggccatgtccagggagaagaaagaggtgtgggaacgcaaggcagaagat
gccaagagagactatgagaaggccatgaaagaatacagtgttgggggcaaatcagagagc
tccaggacggagaagtcaaaaaagaagaagaagaagcaggagaaacaggtgaaggggaaa
gtggagaagaagggggtgtcttccaagtctccatcttcgaagtccccagtcaagcccacc
actgaaagcttcaagagcaaggagtttgtctccagtgatgaaagctcctcaggcgagagc
aagaaggaggactcggaggaggaggagattgccagcacaccccccagctcagaggactca
gcatctggctcagattag
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