Alligator mississippiensis (American alligator): 102573270
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Entry
102573270 CDS
T03087
Symbol
TRUB2
Name
(RefSeq) TruB pseudouridine synthase family member 2
KO
K23497
mitochondrial mRNA pseudouridine synthase TRUB2 [EC:5.4.99.-]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
amj03029
]
102573270 (TRUB2)
Mitochondrial biogenesis [BR:
amj03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
102573270 (TRUB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
102573270
NCBI-ProteinID:
XP_006269517
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All DBs
Position
Un
AA seq
382 aa
AA seq
DB search
MSAPDGCAKGPKHPAAFRHSCTPCCRGTAFRDAPCGRKRISTPAQEEWWDLIPRRIWRPE
VPGARAMAVHGLFAVYKPGGVAWPRVRDAVETRLLAGLNSLEQRSSRQHVRFLPGFVEGE
AGKELTPVATRLPVLADHPLVKGPRFTHLKVGAGHRLDVKSSGVFVLGVGQGCRLLTDMY
NAHFTKDYTVRGLFGKATDDFSDTGKLIEKTTFDHITSEKLERILAVIQGSNHKALLTYA
NIDLKTQEAYELAVKGLLRPMEKSPPLITAIRCLEFAPPEFQLEIQCLNETQQYLRKIVH
EIGLELKSTAVCTQVRRTRDGFFTLDKALLRTHWDMENIQKAIQDSRLTVQTELEKSLGH
LERTAHDEHIEMDQVEEGDASR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccccggacgggtgcgcgaaagggccaaaacacccagccgccttccggcacagt
tgcaccccttgttgccgggggaccgcattccgcgacgcaccctgcggccggaagcgcata
tcgacgcccgcacaggaagagtggtgggacctcattccccgacggatctggaggccggaa
gtgcccggggccagggcgatggcggtgcacgggctcttcgccgtgtacaagcccggcggc
gtggcttggccgcgtgtgcgggacgccgtggaaacccggctgctggcgggcctgaactcg
ctggagcagcggtcctcgcggcagcacgtgcgcttcctgccgggcttcgtggaaggagag
gcgggcaaggagctgaccccggtagccacccgcctgcccgtgctggccgaccacccgctg
gtgaaaggaccgaggttcactcacttgaaagttggagcaggccaccggctggatgtaaag
tcttctggagtgtttgtgcttggagtgggccagggctgcaggctgctcacagacatgtac
aatgcccattttactaaggattacactgttcgtggtctgtttggcaaagccacagatgac
ttttccgatacaggaaagctaatagagaagacaacatttgatcacatcacaagtgaaaag
ctggaaaggattcttgctgtcattcagggaagcaatcataaagctctactgacgtatgct
aacattgacctgaaaacccaagaggcctatgagctggcagttaaagggttacttcgccct
atggagaaaagtcctccattaatcacagcgattcgctgccttgagtttgctcctccagaa
ttccaactagaaatccagtgcttgaacgagactcagcagtacctccgaaagatagttcat
gaaattggcttggagctgaagtcaactgctgtgtgcacacaagtgcgaaggacccgggat
ggcttcttcacactggacaaggctcttctgagaacacattgggacatggagaatatccag
aaagcaattcaagactccaggctcacagtgcaaacagaacttgagaaaagtttaggccac
ctggaaaggactgctcatgatgaacatatcgagatggaccaggttgaagagggtgacgca
tcaagatag
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