Alligator mississippiensis (American alligator): 102573287
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Entry
102573287 CDS
T03087
Symbol
RAI1
Name
(RefSeq) retinoic acid induced 1
KO
K19749
retinoic acid-induced protein 1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102573287 (RAI1)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
102573287 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
102573287
NCBI-ProteinID:
XP_014459798
UniProt:
A0A151N2B5
LinkDB
All DBs
Position
Un
AA seq
1935 aa
AA seq
DB search
MQSFRERCGFHGNQQNYQQTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYNQQQLPYPG
YENSAVEKYHRGNKQLPGQQLQGRPSFSNYAVQENSPYPARYSGDESLQAWGAQPQALAG
GVAKYEENLMKKTPAPPGSRQYHEQASQLPFRTHSLHLQQPPALTYPKLPRQKIQNDVSS
PMPFSQTPHFTQHSQSFPASSTYSSVPGGSQTAHSYKSCTAPSGQPQHERPLGNAANLAS
GQRVQNLHGYQANRMSYDQQQQQQQQQQQQQQQQQQQQQPQPQPQPSLQGRHHAQETLHY
QNLAKYQHYSQPGQSYCQGDAPPVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLM
PNLENFQYSQQSLSAGTFPAGITDHSHFMPLLNPSPTDGTSPEAQPGNCKSLQKEKIPEN
LLSDLSLQSLTALTSQVENISNTVQQLLLSKSSMAQKKGIKNPPRTPEQLKGQHCSPESS
TYSAEQVGTPLSDPLSTPQSVHAETQDADYLSGSEDQLERSFLYCGQGRSPARVNSNSKA
KPESVSTCSVTSPDDMSTKSDDSFQSIHANLPLDTFTKFVTNERECPRLLLSALSQEELA
SEIIVLQDAINEKVDKAWADSPSLSKEATKSPFHLENHRTCLDSMVKGTWPSQGDSSTLT
ESLKLDKASGGNNGKDFSEEVYENPSVEFAAAETKNALKDASSLAYNSKPSIPAATSSSG
AASYSCYSNTTANSVGSESTMEHFDWPDESLSESCLRWKDLGSSLQSSDLSKGLFHSKLA
GSCKEKKNACSMEMCDGEQPAKNEQAKDFSQQEMGEEEEETLTYDEATKADNERWLEDTR
HCCSGGDFSEIPMISSPDLKESDLEPEEYSSLCELASSEQKSMIYDTSPPKPPENATVLS
SSDVPVSAEETVSTVEKENSAPSSRLSGQSVILLGPAVGTETKVKSWFESSLSHIKPEDE
AVGSERTLQGKAESEMPLSVKVKNQVTPENLLIKSEPTLRAKSLRSKRVHCRLSEREDSG
KLVPSLIKDVPAAGVVGSTCVGPESQIETPSKNAHGQTPRFPAEGLPARMCTRSFTALTE
PRTPAPLEGLKASDHQEKLGKKSACAMKQRAAFKARKRSGKPAPKGVQNPSDLAPVLVPN
LVQNDDLVGQKPKDLEAPETEVKDQRSMILRSRTKTQEVFYTKRRRERRTVEVRLKNCKA
PKKLLSNNHLSPAFKLASQGSPHKEGKVGKRMKLPKPGAGMGSKMSERPLHSLKRKSTFL
SPIPAKKRNLVLRSNSSGAKDEKPDASPSLFKRMPSTKKAKAKLPTKSPCEAVLKPPPAK
ETPDVCIKITSRAAFQGATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFACKTAAAAAAA
ATARRNPLSPSAAEKERALKHGSVTPAVGEARPLSQGMAQKSPAASVAEQLCRNSNNRSL
KGKLMNGKKLSSDCFRGEACLSPEPAQHGGSMAAKSLGLLPKKRSRKGKAAALGLAKNPL
DKRAPLAPPLLLTARERAAAGNTLGNGEEGQRDGKKPKSEDKDFANGEGPEGRAAPGQAR
APKQRANHSNYNGYSKRQRKRLARGKAKNVASRCKSRGKRRRQQQQAPLLHPTEPEIRLK
YISCKRLRTDSRALPFSPYVRVEKHNEFTTTCTVINSPGDEARLQKEQHRSSAAQALPPS
GAAPQPRAALPSSSTMHLGPVVSKTLNATCLVCCVCRNPANYKDLGDLCGPYYPEDCLPK
KKSRLKDKIKVEGPSDEAPLPLPAERVLKATDNCPASAVVGKVPRLDSAADSAKQSALRS
SSRGMFRKLQSCYCCDERTEGEEAAEKPKRHECSKPESPAQEPAGDTQEHWVHEACAIWT
AGVFLVAGKLYGLQEAIKAAAEVKCSSCQQTGATVGCCHKGCAQTYHYACAIDTGCLLTE
ESFSLKCPKHKRHPL
NT seq
5808 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagaactaccagcagact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcgtcagaggctggtggcgaaagagtactacaatcagcagcagctgccgtacccgggg
tacgagaacagcgccgtggagaagtatcaccggggaaataagcaattacctggccagcag
ctgcaaggcaggccgtccttttcgaattacgccgtccaagagaacagcccgtacccggcc
cgctactcgggggacgagagcctgcaggcctggggggcccagccgcaggccctagccgga
ggggtggcgaagtatgaggagaacttgatgaagaagacgccggctcccccgggcagccgg
cagtaccacgagcaggcgtcgcagctgcccttcaggactcactccctgcacctccagcag
ccgcccgccctgacctaccccaagctgccgaggcagaagatccaaaatgacgtctcctcg
cccatgcccttctcccagaccccccacttcacccagcactcccagtccttcccggcctcc
tccacgtactcgtccgtgccgggcgggagccagacggctcactcctacaagagctgcacc
gcgccctccggccagccgcagcacgagaggcctctgggcaacgccgccaacctggcctcc
gggcagcgagtgcaaaacctgcacggctatcaggccaaccggatgagctacgaccagcag
cagcagcagcagcagcaacagcagcaacagcagcagcaacaacagcagcagcagcagccg
cagccgcagccccagccttccctgcaaggaagacaccatgcccaggaaaccctccattac
cagaacctggccaagtaccaacattacagccagccagggcagtcctactgtcagggcgat
gcaccgcctgtgaggacgccggagcagtactaccagaccttcagccccagctcgagtcat
tccccggcgcgctctgtcgggcggtctccgtcctacagctccacgccttccccgctgatg
cccaacctggagaacttccagtacagccagcagtccctcagcgccgggacgttccctgcc
ggcatcaccgaccacagccacttcatgcctttgctcaacccttctccgacagatgggacg
agtccagaggctcagcctgggaactgcaaaagcttgcaaaaggagaagatccccgagaac
ctgctgtccgacctcagcttgcagagcctgaccgcgctcacctcgcaggtggaaaacatt
tccaacaccgtccagcagcttctcctgtccaagtcgtccatggcccagaagaaaggcatc
aagaaccctcctcggacgccggagcagctcaaagggcagcactgcagccctgagagcagc
acgtactctgctgagcaggtggggacgcccctgtcagaccctctcagcaccccacagtct
gtccatgccgaaacccaggatgccgattacctgagcgggtccgaagaccaactggagaga
agtttcctctactgcggacagggccgcagcccggccagagtcaacagcaactccaaggcc
aagcccgaatctgtgtccacctgctctgtgacgtccccggatgacatgtccactaagtcc
gacgattccttccagagcatccacgccaacctgcccctggacaccttcaccaagtttgtg
actaacgaaagggagtgcccgcggctgctcctgagcgcgctctcgcaggaggagctggca
tccgagatcattgtcttgcaagacgcgatcaatgagaaggtggacaaggcttgggccgac
tcccccagcttgagcaaggaagcgactaaatccccctttcatttagaaaaccacaggaca
tgcctggactcgatggtaaagggcacgtggcccagccaaggggactcgagcaccctcact
gaatccttgaagttagacaaagcctctggtggaaacaacggcaaggacttcagcgaggag
gtttatgagaatccctcggtggagtttgcagccgcagaaacaaagaacgccctcaaagac
gcgagctccttggcatacaactccaagcccagcatcccagctgctacttccagctctggg
gctgccagttacagctgctactccaacaccaccgccaactcggtgggctctgagagcacc
atggagcattttgactggccagatgaaagcctcagcgaatcctgcctgaggtggaaggac
ctggggtcaagcctgcaatcatcagacctttccaagggcttattccacagcaaattggct
gggtcttgcaaggagaaaaaaaatgcctgcagcatggagatgtgcgatggcgaacagcca
gccaagaatgagcaagcgaaggatttcagccagcaggagatgggggaggaagaggaagag
acgttgacgtatgacgaggccaccaaagcagataatgagagatggctggaagacaccagg
cactgctgttcaggtggggacttcagtgagattcccatgatatcgtctccggatctgaag
gagtccgacttggagcctgaagaatactcctcgctgtgcgagctggcgagttcggagcag
aagtccatgatctacgacacgtccccgccgaaaccgcccgagaacgcgaccgtgctctct
tccagcgatgtgcccgtgtcagcggaagagacggtgagcacggtggagaaagaaaactct
gctccttcctctcggttgtccggccagtccgtgatcctcctaggcccagccgttggcacc
gaaaccaaggtgaagagttggtttgaatcttccctgtctcacatcaaacccgaggatgaa
gctgtggggagcgagcgcactctccagggaaaggcagaatctgagatgcccttgtcagtc
aaggtaaagaaccaagtgacccctgaaaatctgctgataaaatcagagccaaccttgagg
gccaaaagcttacggagcaagagggtccactgccggctgtcggagagagaagactctggt
aagctggtgccgagcctaatcaaagacgtcccggcagctggcgtggtgggcagcacatgt
gttgggccagagagccagattgaaacaccaagcaagaatgcccatggtcagactcctcgg
tttccagcggagggcttgccagcgaggatgtgcacccgctctttcactgctttgacggag
cccaggacaccagcccctctggaagggctgaaagcctccgaccatcaggaaaagttgggg
aagaaatcggcttgtgccatgaagcagagagctgccttcaaggccaggaagcgctctggg
aagccagcccccaaaggtgtccaaaatcccagcgatctggctccagtcctagtcccaaac
ctagtgcagaacgacgacttggttggccagaagcctaaagacctagaggctccagagacc
gaggtgaaggatcagaggtccatgatcctccggtcccggacaaagacgcaggaggtcttc
tacaccaagcggaggcgggagcggaggaccgtggaggtccggctcaaaaactgtaaggcg
cccaagaagctcctttccaacaaccacctctcacctgccttcaagttggcgtcccagggc
agccctcacaaggagggcaaggtaggcaagagaatgaagctccccaagccaggggctggc
atgggcagcaagatgtctgagcggccgctgcattccctgaagagaaaatccaccttcctc
tcccccatcccggccaagaagaggaacttggttttacggagcaacagcagtggcgccaaa
gacgagaagcctgacgcctcccccagcttgttcaaacggatgccgtccaccaagaaggca
aaggccaaactgcccaccaagagcccctgcgaggccgtcctgaagccccctccggccaaa
gagacccccgacgtctgcattaaaatcacctctcgggccgcgtttcagggggccacgaag
acgaaagtcctgcctccgcggaagggcaggggcctcaagctggaggccatcgtgcagaag
atcacttctcccaacctgaagaagtttgcctgcaaaactgccgccgccgccgctgccgct
gctaccgctcgccgcaaccctctgagcccctccgctgcagagaaggagcgggccttgaag
catgggagtgtaaccccagcggtgggagaagccaggccattgagccagggcatggcacaa
aagtctcctgccgcttcagtagcagagcaattatgcagaaattcgaacaacagatcctta
aaagggaaactaatgaacggcaagaaactgtcctccgactgcttcaggggtgaggcctgc
ttgtctcccgagccggcacagcacggcggcagcatggccgccaagagccttggcttgctg
cccaagaaaaggagccggaaggggaaagccgcagccctcggcctggccaagaaccccctg
gacaagcgggctccccttgcccctcctttgctcctgacagccagggagcgggcggccgcg
gggaacacgctgggcaatggggaagagggacaaagggatgggaagaagccaaagagcgag
gacaaagactttgcaaacggcgaaggccccgaggggagagctgccccgggccaggcccgg
gcgccgaagcagcgagccaaccactccaactacaatggctactccaagcggcagaggaag
cggctcgcccggggcaaggccaagaacgtggcgtcgcgatgtaagagcaggggcaagcgg
cggcggcagcagcagcaagcccctctgctccaccccacggagccggagatccgcctgaag
tacatctcgtgcaagcggctgcggacagacagccgggcactgcccttctccccgtacgtg
cgcgtggagaagcacaacgagttcaccaccacctgcaccgtcatcaactcccccggggac
gaggccaggcttcagaaggagcagcaccgttcgtccgcagcccaggccctgcctcccagc
ggggccgcaccgcagccccgagcggcgctgccctcgtcttccaccatgcacctgggcccc
gtggtgtccaagacgctcaacgccacctgcctggtgtgctgcgtctgccgaaacccagcc
aactacaaagacctgggggacctgtgcgggccgtactaccccgaggactgcctgccgaag
aagaagtcgaggctgaaagacaagatcaaagtggaggggccaagcgacgaggcgcccctg
cctctgcccgccgagcgcgtgctcaaagcaacggataattgtccagcgagcgctgtcgtc
ggcaaggtgccgaggttggacagcgctgccgactcggccaagcagagcgctctccggtcg
agctctagggggatgttcaggaaactacaaagctgttactgctgtgatgagaggacagag
ggcgaggaggcggcggagaagcccaagaggcacgagtgcagcaagcccgagtccccggct
caggagccggcgggcgacacgcaggaacactgggtccacgaggcctgtgcgatatggacc
gcaggggttttcctggttgcggggaagctgtatgggctgcaggaggcgataaaggcggct
gctgaagtgaaatgctcgagttgccagcaaacaggagcaaccgttggctgctgccacaag
ggatgtgcccagacctatcactacgcatgtgccatcgacacaggttgcttattaaccgaa
gagagcttctctctgaaatgtcccaaacacaagaggcatcccttataa
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