Alligator mississippiensis (American alligator): 102573363
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Entry
102573363 CDS
T03087
Symbol
PKD1L2
Name
(RefSeq) polycystin 1 like 2
KO
K04988
polycystin 1L2
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amj04040
]
102573363 (PKD1L2)
04091 Lectins [BR:
amj04091
]
102573363 (PKD1L2)
Ion channels [BR:
amj04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102573363 (PKD1L2)
Lectins [BR:
amj04091
]
C-Type lectins
Others
102573363 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
REJ
SUEL_Lectin
Lectin_C
Ion_trans
GPS
PKD
Abhydrolase_9_N
AGA2
Secretin_N_2
Motif
Other DBs
NCBI-GeneID:
102573363
NCBI-ProteinID:
XP_014464738
LinkDB
All DBs
Position
Un
AA seq
2472 aa
AA seq
DB search
MWLLLTVLYSLLLGLAAEEIAVEEGIPCSKYQVAFNRSCYEFVRLPRAFTNAQSWCERGG
GHLVFIENEETQEFLQKHISEDREWWIGLTMDSTLNETSEGSMMWLDTSNVSYSHWHQDQ
PSLFSAACGHILKNAGYEWGVTENCSQEFDFVCEFESGQSIACDNSNATVQCGSGEVIQI
DDSFYGRKTPHYCVLETPLQFDTDDDCSWTSVKDEVAGQCHGLQACQVAADGTFFGDPCP
TLGGYLSVQYHCMEGLQLTVTDTCFIFENITVSLKWLLSPYSGNLSCIISTGDGQTIDPY
YPLTLSSNVTHKYTSPGEFTVFVECTTSEWHVTAQKRVTVQDKMDQLSITGCYSQYGSGN
SSHCWTLYGETLWIQVELNGGSGVTYTVLADNMTLTESTAKTGIIPHNLTLDSTSQQLLG
LGIHLLAILASSNTTISEVSESLTVHLVEPISGLQASLASHTLEMGKDLEINVSVAHGVP
DKLKFEVVGSSETYSHQEDYLKGEPGIYTVPIHSEGTFLVKVLAMNAFSNMSMDIGSITV
SANNSLKEDAAQDKNISKKNTRKANDKQRNKISIKPSRHVDPFTTVMLGWPDDSESLSFT
WSCGACWPGWNDCVEQQVIPTNHSQVKIPPACLPPPNSAVTVKVTVSNHSKEERQDEQCL
YVTAKQELHLDIRCETNCKPVNASEEVVLSVTSQKGPEAMRYNWYLDNTFHAKPAPLPAA
CTLNGFRQSSLMLLLSNRSALILNSSFLQTHGEVFQIKVIALTQHEYGEETHIVSMVAAP
AVPACAISPEEGSVLTSFTISCSTSCLKDSCLPAQPSLLTYCFYLKSNSLLHCGPDPELS
SIYLPLGEEENDFILHVTVTVSNSFGDTVHTNATVKVRHEELDNGNQTLHAIVSEKTNTI
LKDGNNSMSLFQLYKSVSSVLNQETQQETYNASLRTDTRKELRELMLTTLSTVNVTSMQT
ALKMSEVLKEITHRSEELSSSAQVEASNTLKDVSESLLRVNMEDSEDDQKRKEAASYLFN
AVSNVLEASVHNRTGATSPPEAEKSLVSHKLLNTVENLQSAFLFGKLPDDDPVVLATPSV
AMYINRLQTDSMDGTSIRVSSYTSASFTLPSASSLSVSGDDDDTLDLRMVSFAVNPFVSS
DTSLEITGAVGGLSLTSSNGLVIPVNDLTENIEIMLPRLPAIQEDRSLLNLGNFSAFQVN
ITSENTSLVVHLEPEQAIPLVLYLGYGYCPNETNYDMKTHLPHTKMTGDMSSTWVLSPEE
LTFGEGTYYFLVKQDMEMDSTAGSDLTVAVTCFVSQCVFWDELQGNWNSYGCHVGPKTTP
ISTQCLCNHLTFFGSSFFVTPNAIDVSKTVELFGTFVDNPVVVTTVGCIFLVYVLVLIWA
RRKDIQDNAKVKITVLEDNDRFAQYRYLVTVFTGHRRGAATTSKVTLTLYGLEGESEPHH
LMDPDTLVFERGGVDVFLLCTLFPLGELQRIRLWHDNSGNSPSWYVNRVLVHDLARDQKW
YFLCNSWLAIDVGECVLDKVFPVATEQDMKQFSNLFFMKTSKGFRDGHIWYSIFSRSPRS
CFTRAQRVSCCFSLLLCTMLTSIMFWGVPKDPAEQKMDLGKIEFTWQEVMIGFESSLLMF
PINLLIVQIFRNTRPRPAQQQKEKKPGKSGRVSPSLPPPPQAMQSISLTPEADIKRIANS
LFKTLKTPLPSSETVLGKSADINLLLALVEDIICQQNQAGREFYNESKKKDDPIIITLGS
VDIQEKTRSPTPEKGMTDRLKHNDYNRYLYMQLQHVEMELELLGPYKFQKPQSYTQAVRQ
VQHMKGLLESQICSSGSISLQFPSDGKKVSSSKGLPWWFVFIGWFLIVATSGVSGFFTML
YGLHYGKENSIKWLISMAISFFESLFITQPLKVLGFAAFFALVLKKMEQEDEENTTIDGS
LSAPGDSNPLFGARRDSRSNIYHPPPMTDIEKMKRNHIKEQKAFALIREILAYLGFLWML
LLVAYGQRDPSSYYLNKHIENSFTDGFRDVYSYQDFFTWARTTLVNNLYGSYQGFITDGN
SKLVGSARIRQVRVKGDTCPIAPKLQHSVQECHAPYSLQTEDTSDYGERWNISAFDNSSD
FSSAWQYQSQSKLRGHPIWGKLASYRGGGYVVHLGTDLKNATRILQYLFSNIWLDTFTRA
VFIEFTVYNANVNLFCIISLMFESNALGAFFTHAELQSIRLYPYTDSLHIFVVAAEVIYF
LFVVYYMVMQGKLMRALKWRYFYSKWNLLELAIILISWSALSVFVNRTILGARDISYYQE
HKDECVSFNETATADAVLGYLIAFLVLLSTVKLWHLLRLNPKLNMITSTLKRAWGDISGF
ITVIAIMFLAYSIATNLIFGWKLHSYKTLFDSAETMVSLQLGIFNYEEVLDYNPVLGSFL
IGSCIIFMTFVVLNLFISVILVAFSEEQKYYQASEEEEIVDLMLMKLFSFLGIKRKKEQT
TDSEELKELAST
NT seq
7419 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttctcctcaccgtactctactctctcttgctcggcttggctgcagaggagatt
gctgttgaagaggggataccttgctccaagtaccaggtggctttcaaccgctcatgctat
gaatttgtgagactcccacgtgctttcaccaacgcccagagctggtgcgagagaggaggg
gggcatctcgtcttcattgaaaatgaggaaacccaagagttcctgcagaaacacatctct
gaggacagggagtggtggataggactgactatggactctactctgaatgaaacctcagaa
ggatcaatgatgtggttggacacttcaaatgtaagttacagccactggcatcaggaccag
ccatctctcttctcagccgcgtgcgggcacatcctgaagaacgctggctatgaatggggc
gtcactgagaactgcagccaggagtttgactttgtctgcgagtttgaatctggccagagc
atcgcttgtgataactccaatgccacggtgcagtgcggctcaggagaagtcattcaaatt
gatgacagtttctatgggaggaagacccctcattactgtgtactggagactcctcttcag
tttgacacagatgacgactgtagctggaccagcgtcaaggatgaagtagcagggcagtgt
catggactgcaggcatgccaggtggcagcagatgggaccttctttggtgatccttgccca
actttggggggctatttgtctgtgcaataccactgcatggaaggtctgcagctgaccgtg
acggatacatgctttatctttgaaaatatcacagtctctttgaaatggctgctctctccc
tattctggcaatctctcctgtataattagcaccggagatggacaaactattgatccctac
taccctcttaccttgtccagcaatgtaacgcataaatatacatctcctggagagttcact
gtgttcgtggagtgcacgaccagcgagtggcatgtaacagcacagaaacgcgtgactgtt
caggacaagatggatcagctcagcattacggggtgctatagccagtacggatcagggaac
agttctcactgctggacactatatggggaaacgttatggatccaagtggaacttaatgga
ggcagcggcgtgacctacactgtcttagcagataacatgactctcactgagtccactgca
aagacagggatcatccctcacaacctgacgcttgacagcacctctcagcagctccttggc
ttggggatacacctactggcaattctggcatccagcaacacgacaatctcagaggtctct
gagagcctcactgttcacttagttgaaccaatatctggtcttcaggcttcattagcctct
cacactctggaaatgggaaaagacttggagatcaatgtatctgtggctcatggtgtacca
gacaagctaaagtttgaagtggttggctccagtgaaacgtattctcaccaagaagactat
cttaaaggagaacctggaatatatacagttcctattcattcggaaggtacttttctggtc
aaggtgctggccatgaatgccttctcgaacatgagcatggatattgggagcatcacagtg
tcagccaacaattctcttaaagaagatgctgctcaggacaaaaacatatccaaaaaaaat
acccgaaaggcaaatgacaaacaaagaaataaaatatccattaagcctagtcgccacgtg
gatcccttcaccacggttatgctcggctggccagatgacagcgagagcttgagcttcaca
tggtcctgtggggcctgctggcctggctggaatgactgcgtggagcagcaagtcatcccc
accaaccacagccaggtgaagatcccacctgcctgcttgcctcccccgaactcagcagtg
accgtgaaagttacagtgagcaaccacagcaaggaagagaggcaggatgagcaatgtctg
tatgtgacggcaaagcaagagctgcacctggacatcaggtgtgagacaaactgcaagcca
gtaaatgctagtgaagaagttgttttgagtgtcaccagccagaagggcccagaggccatg
cgctataactggtatttggacaatacattccacgcaaagcctgctccgctccctgcagcc
tgcactctgaatggtttccggcaaagctctttgatgctgcttctgagcaatagatctgca
ttgatattgaacagctcctttctgcagacacatggagaagtgttccagattaaagtcata
gcactgactcagcatgaatatggtgaagaaactcacatcgtcagcatggtggcagcacca
gcagtgccagcctgtgctatatcccctgaggaggggtcggtactcaccagtttcaccata
tcctgcagcacttcctgcttgaaggactcgtgcctgcctgcacaacccagtctgctcaca
tattgcttctatctgaaatcaaattctctgttgcactgcggcccagatcctgaactctca
tccatttatcttccacttggagaagaggaaaacgacttcattttacatgtcacagttact
gtcagcaatagctttggtgacacagttcatactaatgctacagtcaaggttaggcatgaa
gaactggataatgggaaccagaccctgcatgccattgtatctgagaaaacaaacaccatc
ctaaaagatgggaacaacagcatgtccctgttccagctgtacaaatcagtatcttcagtc
ctcaatcaggagacccagcaagagacctataatgcatctctgcggacagacacgcggaag
gagctgagagagctgatgctgacgactctgtctactgttaatgtaacatcaatgcagact
gctcttaagatgtcagaggtcctaaaagagatcacacacaggagtgaggagctctcctcc
tcagcacaggtagaagccagcaacacgctaaaagatgtcagtgaatccctgcttagggtg
aacatggaggacagtgaggatgaccagaagcggaaggaagcagccagctacctatttaat
gcagttagcaatgtgctggaagcatctgtccacaacaggactggagctacatcaccaccg
gaggctgaaaagagtttggtgtcacacaagctgttgaacacagttgaaaatctgcagagc
gccttcctgtttgggaagctaccagacgatgaccctgtggttctggctactccctctgtg
gcaatgtacataaacaggttacagacagacagcatggatggtacatccattcgtgtctcc
agttacacctctgccagctttactctgccatctgcctcttccttaagtgtctcaggagat
gatgatgacactctggatttaaggatggtgagctttgcagtgaatccctttgtatcaagt
gataccagccttgaaatcactggagctgtgggaggcctaagtcttaccagctcgaatgga
ctggtcataccagtcaatgaccttactgaaaacattgagataatgctaccaaggcttcca
gcaattcaggaagacaggagccttctgaatctgggcaattttagtgctttccaagtcaat
attacctctgaaaatacatctctagtggtccacctagaacctgaacaggctattccactc
gttctctacttaggatatggctattgtccaaatgagactaactatgatatgaaaactcat
ctgccccatacgaaaatgactggagatatgtcaagtacctgggttctcagcccagaagaa
ctcacttttggagaagggacttactattttttggtgaaacaagacatggaaatggattct
acagctggtagtgatttaactgtagcagtcacttgctttgtatcccagtgtgtattctgg
gatgagcttcaggggaactggaatagctatgggtgccatgtaggaccaaaaacaaccccc
atcagtacccagtgcctttgcaaccacctcactttctttgggagctccttctttgtcaca
cccaatgccattgatgtcagcaaaacggtagagctgtttggcacttttgtggacaaccct
gtggttgtgacgactgtgggctgtatctttttggtctatgtgctagtgcttatatgggct
cgaagaaaagacatccaggataatgccaaggtgaagatcacggtgctggaggacaatgac
cgttttgctcagtatcgttatcttgtgacagtttttaccgggcaccgtcgaggggcagcc
acaacttccaaggtgactctcaccctctatggcctggaaggagagagtgagccccatcac
ctaatggacccagacacattggtctttgagcgtggtggagtggatgttttcctgctctgt
actctgttccctcttggggaactgcagcgtatcaggctgtggcatgataattcaggaaac
agcccatcctggtatgtgaatcgcgtgctggtccatgacctggctcgggatcagaaatgg
tattttctctgcaactcttggttggccattgatgttggggaatgtgtcctagacaaagtg
ttcccagtagctactgaacaggacatgaagcaattcagtaacctgttcttcatgaagacc
tcaaagggtttccgcgatggacacatctggtactcaatcttcagccgttccccacggagc
tgcttcacgcgagcccagagggtatcgtgctgcttctccctgcttctctgcaccatgctg
acaagcatcatgttctggggggtgcccaaggatccagctgagcagaagatggacctaggc
aaaatcgagttcacatggcaggaggtgatgattggctttgagagctccctcctcatgttc
cccatcaacctgctcatcgtgcagatcttcaggaacacccggccccggccagcccagcag
cagaaggagaagaagccagggaaaagtggtcgagtgtctcctagccttcccccaccccct
caagccatgcagagtatctcactcactccagaggctgatattaagagaattgccaattca
ctgttcaaaacactgaagactccactaccctcttcagaaacagtgctgggaaaatctgct
gacatcaacctgcttttggctttggtcgaggatatcatctgccagcagaaccaagctggg
cgagagttttacaacgagagtaagaagaaggatgatcctatcatcattacattaggctct
gtggatatccaagaaaaaacaagaagtcccaccccagagaaagggatgacggaccgactg
aaacacaatgattataaccgctacttgtacatgcagctccagcatgtagagatggagctg
gaattgctgggaccttacaaatttcagaagcctcagagttacacccaggctgtaaggcag
gtccagcacatgaaaggcctgctagaaagtcaaatctgctcttcaggctccatcagtctc
cagtttccatctgatggcaagaaagtttcctcttccaaagggctgccatggtggtttgtt
ttcataggctggttccttatagttgccaccagtggagtgtctggtttcttcaccatgctc
tatgggctgcattacggcaaggagaactcaatcaagtggctgatctccatggccatctcc
ttctttgagagccttttcatcacccaacccttaaaagtgctaggatttgctgctttcttt
gccctggttctgaagaagatggaacaggaagatgaggagaacacaaccattgatggatca
ctgtctgctccaggtgactcaaatcctctgtttggagcccgaagggacagcagaagcaac
atctaccatccccctcccatgacagacattgagaaaatgaagaggaatcacatcaaggag
cagaaagcctttgccttaatcagagagatactggcttacttgggatttctatggatgctg
ttgttggttgcctatggacagcgggatcccagttcctactacttgaacaagcacattgag
aacagctttacagatgggtttcgggatgtctacagctaccaggacttcttcacatgggca
agaactaccttagtcaacaatttgtatggctcatatcaagggttcattacggatggcaac
tccaagttggtgggtagtgcccgaatccgacaagttagagtgaagggggacacctgtccc
attgctcccaagctgcagcattcagtccaagaatgccatgctccctactctctccagaca
gaagacacatcagactatggagaacgctggaacatctcagcctttgataactcctctgac
ttcagctctgcatggcagtatcagagtcagtccaaactgagaggccatcccatctggggc
aagcttgccagctacaggggaggtggatatgtggttcacttgggcaccgaccttaagaat
gcaaccagaattctccagtacctcttcagcaacatctggctggatacctttacgagagca
gtgtttattgaatttacagtctacaatgccaatgtgaacctgttctgcattattagcttg
atgtttgaatctaatgctttaggggcattcttcacacatgcagagctgcaaagcatccgg
ctgtatccatacacagatagcctacacatatttgttgttgcagcagaagttatttatttc
ctatttgttgtctactacatggtaatgcagggaaagctcatgagggctctgaaatggagg
tatttctacagcaagtggaacctgctagagctggccattatactgattagctggagtgct
ctatcagtgtttgtgaaccggacaatcctgggggcacgagacatcagctactatcaggag
cacaaggatgagtgtgtaagcttcaatgaaactgccacagctgatgcagtgcttggctac
ctgattgctttcctagtacttctgtctacagtgaaactgtggcatctcctgaggctcaac
cctaaactcaacatgatcacttctactctgaagagggcatggggtgacatctctggattc
atcacagttattgcaatcatgttcctggcttactctatcgctactaatctgatatttggt
tggaagctgcactcttacaaaaccctcttcgattcagcagagacaatggtcagccttcag
ctgggaatcttcaactatgaggaggtcttggactataatccagttttaggctccttctta
attggatcctgcattatttttatgacatttgtggtgctgaacctgttcatttcagttata
ttggttgcttttagcgaagaacagaaatattaccaggcatcagaagaggaagagattgtc
gatctaatgctgatgaaacttttcagtttccttgggattaagcgcaaaaaagagcagaca
accgatagtgaggaactgaaagaacttgccagcacctaa
DBGET
integrated database retrieval system
