Alligator mississippiensis (American alligator): 102573382
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Entry
102573382 CDS
T03087
Symbol
CLIP1
Name
(RefSeq) CAP-Gly domain containing linker protein 1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
102573382 (CLIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102573382 (CLIP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amj04812
]
102573382 (CLIP1)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
102573382 (CLIP1)
Cytoskeleton proteins [BR:
amj04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
102573382 (CLIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Fungal_TACC
INO80E
HTH_11
Motif
Other DBs
NCBI-GeneID:
102573382
NCBI-ProteinID:
XP_019342391
LinkDB
All DBs
Position
Un
AA seq
2212 aa
AA seq
DB search
MSMLKPSGLKAPTKISKPGSTLLKAAAVPAPAEKAAPTEKSSSTPPAEAHEEFVDDFRVG
ERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLRGIFTRP
SKLTRKVVAEDEANGTQTAHASRATSPTSTSAASVVSSSAPAPPTGIPHKTSPPAAKEHS
TPSPVSNLSKTASESISNLSEAGSVKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGE
WCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKTTVRKVVA
TPSTLKRSPSASSLSSLSSVASSVSSKPSRTGLLTETSSRYARKISGTTALQEALKEKQQ
HIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHVVEVEAKMDQLRAMVEAADR
EKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKRQISEDPENTQTKLEHARIKELEQ
SLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLESSKPVGDV
DASLSLLQEISSLQEKMAAISKEHQNEINSLKEKFGISEEACQKEIKALSASNDRIAKEN
ESLKTKLDHANKENSDVIELWKSKLESAIASHQQAMEELKVSFSKGVGAQTAEFAELKTQ
IEKMKLEFENETSNLKLKHENERSYNLKEIEGLKAKLLAVTEEKERSLENLKSKLESAED
QHLVEMEDTLNKLQEAEIKVKELEVLQAKFSEQTKVIDSLTTQIKAAEEKILDLDALQKA
NSEGKLEIQKLSKQLETAEKQIQSLEAEKSDGSSKASNLAKDLQSKEQKLLDLETNLSAV
NQVKDSLEKELQVLKEKFTNAADEAESVQKAMQETIKKLNQKEEQFALMSSELEQLKSSL
TVMEKKLKEREEKEQQLIEAKAKLENDIAEIMKSSGDSSSQLTKMNDELRLKERQLEELQ
LEFTKANERAAQLKESMEQTTKKAEQNQLEADKNHQNELKKMQDKLVDLEKQLEKSQNQY
KDLQAEHEKNNAEMIAKHDTSIKDLKQNLLDMEEMLKTAQKKNSDLEKRAEALQKQAEQA
KSLTSVLASARKELEQMSDEMRGLISEKETLTQEGNALMLEKGSLLSKLVELESKILVLQ
QDQEKLQTMNEELNSENEKILAEKQKAEARIHQESAEKLTLISERETLRSEIEAAQEDLL
KITRENDVLCSSKSTLLQQLEDLQTSRDALVVECQKHIREKEELDDCQKKLSEENAALVK
DKDGIIQKLKSSYEDLARDQKELLQEAAALSIERDSVLNKHLALENTYVALKKERDDLWQ
RSQDLQSEKETLLQRAEELHLSIETALREKQTLNVDIEGLQEELQTVSNELKKATQDNAE
LQASHSSLSKLLEDIKVSRETSDSECIQLLQEKEALSSSERRLLAEREKLLRENKAITEK
LTTVTLAERALNEKVSQLSADQELASQKSLKLKKQNDALLKEKDSLEIKYSELLTEKQSS
ASALFDLKRKHESDMSATSALLQEKTKLQDSIETLERDLDSKNQENQELMEYKCELAKLL
KEAQNAKTTLENELFAVSHAKQLLATSLQTCSSEKEAVAQERTELQEKCHKLIEEVQIMK
QNLTREKEARKLEKDSFLLERAELQSTISSLERGKEQLTDKNKELLMERQRLVQEKDRSE
SKLEEIMKEKEILSAETEQLASNIEQLQSDFVSLSKSKAELQDLHSCLSKILEDLRCSHE
VTEVERAKLLQENESLLAEQKKLILIKEEILKEKEKFSEDYYKLHEEMKALAQSNSDLSA
KLLVSENKNQMLLNEMNGLALKLKEIEVLQAQTVMQKSEVAKMAEDALQMVEQVTKEKDA
LHKEKTETLASLEDSKHTNQKLQNEVDVLKQNNLKNEEELNKSKELLNLENKKMEEFRKE
LEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSL
PSNTLRESAFKKEIDEERASLQKSISVTSALITEKDAELEKLRNEITVLRGENASAKTLQ
SVVQSLESDKLKLEEKVKNLEQKLKENKKQPLTVTSSSGDTAANLLQEESAKESQHMIDF
LNSVIVDLQRKNEELKLKVETMSEAALNGNEEEINNYDSEEESLSKKKPRLFCDICDCFD
LHDTEDCPTQAQVSDEPPHSTYHGSRKEERPYCDICEVFGHWTTNCNDDETF
NT seq
6639 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgttgaaaccaagtggactgaaggctcctaccaagatcagcaagcctggaagt
acattactaaaggcagctgctgtgcctgctcctgcagaaaaagcagcacctactgaaaag
tcatccagcacaccccctgcagaggcacacgaagagtttgtagatgacttcagggttggg
gaacgtgtttgggtcaatggaaacaaacctggctttattcagtttcttggtgaaacacaa
tttgctcctggacagtgggcaggaatcgttttagatgaaccaattggtaaaaatgatggt
tctgtggccggagttcgatatttccaatgtgaacccttaagaggaatatttacaaggcca
tctaagctgaccagaaaagtggtggcagaagatgaagccaatggtacgcagacagctcat
gcttctagagctacttctccaacctccacatcagccgctagtgtggtatcttcttctgca
ccagctcctcctacaggaattccccataaaacttctccacctgctgctaaggaacactca
actccttccccagtgagcaatctttcaaaaactgcaagtgaatctatatcaaacctctct
gaagctgggtctgtgaagaaaggggaaagagaactaaaaatcggagatcgagttttggtt
ggtggaacaaaagctggagtagtacgatttctaggagaaactgactttgctaagggagag
tggtgcggagtagaattagatgaacctttgggaaagaatgatggagcggtggctggaaca
aggtattttcagtgtcagccaaaatatggtttgtttgccccagtccacaaagttaccaag
attgggtttccatcaaccacaccagcaaaagccaagacaactgtgaggaaagtggttgca
acgccatcgactctgaagcgcagtccaagtgcatcctcccttagttctctcagttctgtg
gcatcatcagtaagcagcaagccaagccgtacaggactattgacagaaacatcttcccga
tatgcaagaaaaatttctggcaccacagccttgcaggaggccctgaaggagaagcagcag
cacattgaacagcttctggcagagagagacctggagagggcagaagttgctaaagcaact
agtcatgttggggaaatagagcaggagctagcacttgttcgagatggacatgaccggcat
gtggtggaagtggaagcgaagatggaccagttacgggctatggttgaagctgctgatagg
gagaaagtggagcttctcaaccaacttgaagaagagaaaaggaaggtagaggaccttcag
ttccgtgtagaagaagaatccattaccaaaggagacctagagcgaaagaggcagatttct
gaagatcctgagaatacgcagaccaaactggagcatgcccgcattaaggagcttgaacag
agcctgctctttgaaaagaccaaagctgacaaactccagagggagttagaagacactagg
gtggccacggtttcagaaaaatctcgcatcatggaactagaaagagatctagcattacgt
gtgaaggaagttgcagagctccgaggaagattagagtctagcaaaccagttggtgatgtg
gacgcttctctttccttgttacaagaaataagttctttgcaagaaaaaatggcagccatt
agcaaagagcatcaaaatgaaattaattcattgaaagagaagtttggtatcagtgaagaa
gcttgtcagaaagaaatcaaagcactttcagcttcaaacgatagaattgcaaaagagaac
gagtcattgaaaactaaactagatcatgctaacaaggagaattcagatgtgatagagctg
tggaagtcgaagttggaatctgcaattgcttcacatcagcaagccatggaagaattaaag
gtttctttcagcaaaggagtcggggctcagactgctgaatttgcagagctgaagacacag
attgagaaaatgaaattagagtttgaaaacgaaacctccaatttaaaattaaaacatgag
aatgaacgatcttataatctgaaagagattgaagggctgaaagcaaagctgttggcagtc
acagaggagaaagagcgaagcctggaaaacctgaagtcgaaactggaaagtgcagaagat
caacatctagtagaaatggaagacactttaaacaaattgcaggaagctgaaataaaggta
aaggagctagaggtactgcaagccaagttcagtgaacaaaccaaggttattgatagtctt
acaacacagatcaaagctgctgaagaaaagattttggaccttgatgcacttcagaaagcc
aattctgaaggtaaattggaaatccagaaacttagcaagcagcttgagacagctgagaaa
cagatacagagcttagaggcagaaaagagtgatggaagtagcaaggctagtaatctggcc
aaagacctgcagagcaaagagcaaaaacttctagaccttgagacaaacttaagtgcagta
aatcaagttaaagattctttggaaaaggagctgcaagttttgaaagagaagttcacaaat
gccgctgatgaggcagaaagtgttcaaaaagctatgcaagaaaccattaaaaaactaaac
caaaaagaagagcagtttgcacttatgtcctcagaactggaacagttaaaatctagtttg
acagttatggagaaaaaactgaaggagagggaagaaaaagagcagcagttgattgaagct
aaagccaaacttgaaaatgacatagcagagatcatgaaatcgtcaggagatagttcgtct
cagcttacaaagatgaatgatgagctacggttaaaggagaggcagctagaagaattacaa
cttgagtttacaaaagcaaatgaaagggctgctcagctgaaggaaagcatggagcagaca
acaaagaaagctgaacagaaccagcttgaagcagataagaatcatcaaaatgaactgaaa
aaaatgcaggacaaactagtagacctggaaaagcaattagagaagagccaaaatcagtat
aaagatctgcaggcagaacatgaaaaaaataatgctgagatgattgctaaacatgataca
tccatcaaagatcttaaacagaatctgctggacatggaagaaatgctgaaaactgcacaa
aagaaaaatagtgacttggaaaaacgggctgaggcgcttcaaaaacaagcagaacaggcc
aaatccttaacctctgtgttagcatcagccagaaaagagcttgaacaaatgtcagacgaa
atgaggggtttaatatcagaaaaagagacgctgacacaggaggggaatgctttaatgtta
gagaaaggttcgctgttatcaaaacttgtagagttggagtccaagattttggttttgcaa
caagaccaggaaaagcttcagacaatgaatgaagaacttaattcagaaaatgaaaagatc
ctagctgagaagcagaaagctgaggctagaattcaccaggaaagtgcagaaaagttaacg
ttaatttctgagcgagaaaccttacggtctgaaattgaggcggcacaggaagatcttctg
aagataactagggagaacgatgtgctctgctcttcaaaatcaaccctgctccagcagcta
gaagaccttcagaccagcagagatgccctggttgtggaatgtcagaagcacattagagaa
aaagaagaactggacgattgtcagaaaaaactttctgaggagaatgctgctcttgttaaa
gacaaagatggtatcattcagaagctgaaaagctcttatgaggacttggccagagatcaa
aaggagctgctgcaagaagcggctgctctgtctatagagagagattcagttttgaataaa
catttggctctagaaaatacatatgtagctttaaaaaaagagagggatgatctatggcaa
agaagccaggacttgcaatctgaaaaggaaacactccttcaaagggctgaggagctacat
ctaagcatagaaactgctctgagagagaaacagacactgaatgtagacattgaaggtctc
caagaagagctgcagactgtgagtaacgaacttaaaaaggccactcaagacaacgcagag
ttgcaggcttctcattctagtctctctaagcttcttgaagacattaaggtgagtagagag
acatcagactcggagtgtatccaattgctacaagagaaggaagctctttcttcatctgaa
cggaggcttttggctgagagggagaaacttttaagggaaaataaggcaattacagaaaag
cttaccacagtcacccttgctgagagagctcttaatgagaaagtaagtcaactgagtgca
gatcaggaattggcttctcaaaaatcattgaaacttaaaaagcagaatgatgctctcctc
aaagaaaaggactccttggaaatcaaatactcggagcttctcacggaaaagcagtcttct
gcaagcgcgctctttgacttgaaaagaaagcacgagtcggacatgtctgccacgagcgcg
ctgctccaagagaagactaagctccaggattccatcgagaccctcgagagagacctggac
agcaaaaaccaagaaaaccaagaactgatggagtataaatgtgaacttgcaaagcttctg
aaagaagctcaaaatgccaagacaacactagaaaatgaactttttgctgtatcccatgcc
aaacagcttctcgcaacttcactccaaacctgttcctctgaaaaggaagcagtggcccag
gaaaggaccgaattgcaagaaaaatgtcacaaactgattgaagaggttcagattatgaaa
cagaatttaaccagagaaaaggaagctagaaagctagagaaggattcctttttattggaa
cgtgcagaacttcagagcaccatcagctccttggagagggggaaagagcagctaacggat
aaaaataaggaattgctgatggagagacagcggctggttcaggagaaagacaggtctgaa
tccaaactggaggagattatgaaagaaaaggaaatcctcagtgcagagacagagcaactt
gcctccaacattgaacagctacagagtgactttgtgtccttgtctaaatcgaaagcagag
cttcaggacttgcacagctgcctctccaagatcctagaagaccttcgctgcagccatgag
gtgacagaagtggagcgagcaaagctgctccaagaaaatgagagcttgcttgctgagcag
aagaaactgatcttgatcaaggaagaaatactgaaggagaaggagaagttctctgaagac
tattacaaactgcatgaggaaatgaaagccttagcacaaagtaacagcgacctctcagcc
aagctactggtgtcggagaacaaaaatcagatgctgctgaacgaaatgaacggtcttgct
ctgaaactcaaagaaattgaggttcttcaggcacaaacagtaatgcaaaaatctgaggtt
gctaaaatggcagaagatgctttgcagatggtggagcaagtgaccaaagagaaggatgcc
cttcataaagagaagactgaaaccctggcttctttggaggattctaaacacaccaatcag
aagctgcaaaatgaagtggacgtgcttaaacaaaataacctgaaaaatgaagaggaactc
aacaagtcaaaagaacttctaaatctagagaacaagaaaatggaagaatttagaaaagaa
ctagaagcgctgaagctggcagctgctcagaagtcccagcagcttgcagccctgcaagag
gagaacgttaaacttgctgaggagctgggcaggagcagggacgaagtcacaagtcaccag
aagctggaagaggagagatctgtactcaataaccagttgttagagatgaaaaagagcttg
cccagtaacactttaagagaatctgcatttaaaaaggaaattgatgaagaaagagcttct
ttacaaaaatccatcagtgttactagtgccttgatcacagagaaagatgcagaactggaa
aaactcagaaatgagatcacagtgctccgtggagaaaatgcctctgcaaaaaccttgcag
tcagtagttcagtcactggagtctgataagttgaaacttgaggaaaaggtgaagaacttg
gagcagaaactcaaagagaacaagaaacagcctttaactgtaactagctcctcaggtgac
actgctgctaatctactccaagaagaaagtgcaaaggagagccagcatatgattgatttc
ctgaattcggtgatagtggatcttcaaaggaaaaatgaagaattgaagctgaaggtggaa
acaatgtctgaagcagctctcaatggcaatgaggaggagataaataattatgacagcgag
gaagaaagcctgtcgaagaagaaacctcgcctcttctgtgacatttgtgactgctttgat
ctccacgacacagaagactgtccaactcaggcgcaggtgtcagatgagcctccccattca
acttatcatggcagcagaaaagaagagcgcccctattgtgacatctgtgaggtgttcggg
cactggacaaccaattgcaatgatgatgagaccttctaa
DBGET
integrated database retrieval system
