Alligator mississippiensis (American alligator): 102573438
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Entry
102573438 CDS
T03087
Symbol
BTAF1
Name
(RefSeq) B-TFIID TATA-box binding protein associated factor 1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amj03021
]
102573438 (BTAF1)
Transcription machinery [BR:
amj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
102573438 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_MROH2B_C
TOR1L1_N
HEAT_2
Vac14_Fab1_bd
TPR_Trm732_C
HEAT_GCN1_C
HEAT_GCN1
HEAT_EZ
ARM_TBCD_2nd
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
102573438
NCBI-ProteinID:
XP_014463312
UniProt:
A0A151NZH4
LinkDB
All DBs
Position
Un
AA seq
1844 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLVYLRSTNWDTRI
AAGQAVEAIVKNVPEWNPTPRPKPEPGSESPIEDSSATDRLRFDGFDICRLLKHGASLLG
SAGAEFEVQDDKAGEIDHKERIARQRKLLQKKLGLDMGAAIGVNTEDLFNDEDLDYIPTS
ASLINKQPTLQAAELIDSEFRAGMSSRQKNKAKRMAKLFAKQRSRDAVETNEKSNDSTDG
EPEEKRRKVGNVVLSQPAADSKVLVDNTSEEVNEWPLESFCEEVCNDLFNPSWEVRHGAG
TGLREILKAHGKSGGKIGDSTVEEMAQQHQEWLEDLVIRLLCVFALDRFGDFVSDEVVAP
VRETCAQTLGVVLKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVRQDLINS
LLPKVLPAIIEGLQDLDDDVRAVAAASLVPVVESLVHLQSQKVPFILNTLWDALLELDDL
TASTNSIMTLLSSLLTYPEVRKCSIQQSLTVLVPRVWPFLHHTISSVRKAALETLFTLLS
TQDQSSSTWLTPILQDMLRHIFQFCILESNQEILDLIHKVWLELLNKAPIQYLVAAACPW
MGAWLCLMMQPSHLPIDLNMLLEVKARSKEKTGGKLRQNLTQAKEVIQEYIAGADSITED
PVTRDYVVMRARMMAAKLLGALCCCICEPSVNTVTQEVKPAESLSQLLLFHLNSKSALQR
ISVALVICEWAALQKECKTIVFSVHPRLLEVLSEHLYYDEIAVPFTRMQNECKQFISSLA
DAHIDIANRVNCSVFTIDQANELVTTVFNEVTSPFNLNSKALQQLDSKRQQVQMTVTETN
QEWQVLHLRVHTFTACAVVSLQQLPEKLNPVIKPLMEAVKKEENTLVQNYAALCIAKLLQ
QCTPRSPCPNSKIVKNLCSSLCVDPHLTPLASCPAQPQSSQENSKGPNSDRDGMHHTVTK
HRGIITLYRHQKAAFAITSRRGPTPKAPKAQIPDLPTGSSGNIPTELDEAQKPYVVQRRG
AEFALSTIAKHFGAEMATGLPHLWDAMVGPLRININTDNFDRKSLLEKGDTSAQEVVNSL
QVFETTAASMDVQLHPLLIQHLPHLYMCLQHPSTAVRHMAARCVGVMSKIATMETMNIFL
EKVLPWLGAIDDNTKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTDSVRFMA
TQCFATLIRLMPLEAGIPDPPDMSEELIRVKAKERHFLEQLLDGKKLENYKIPVPIKAEL
RKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCLRAQEYARTKLVDSVP
LPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERARLQHQVKRHNLIVASYDVV
RNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSL
FDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKE
DVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDIDETVSSISLTEETEKPKLKATG
HVFQALQYLRKLCNHPALVLTTQHPEYKRITEQLAALNTSLRDIQHAPKLSALKQLLLDC
GLGNGGSSESGTEAVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPAGQR
HSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQK
RVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENASLQSMGTDQLLDLFTLDKDGKP
EKADTSSSSGKASMKSVLENLGELWDQEQYDSEYSLENFMHSLK
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccagacttgatcgtctctttattttactggacactggtacaacaccagta
acaagaaaagcagctgctcaacaacttggagaggtggtgaaactccatccccatgaatta
aacaatctgctatctaaggtgttggtatacttaagaagtacaaattgggatactcgtatt
gcagcaggccaggctgttgaagccatagtgaaaaatgtacctgaatggaatccaactcca
agacccaaaccagaacctgggtcagaaagtcctatagaagattcatctgcaactgatcga
ttacgttttgatggatttgatatctgtcggctgttaaaacatggggcatctcttcttgga
tctgctggcgcagagtttgaggtccaggatgataaagcaggtgaaattgatcacaaagag
agaatagcacggcagagaaaactgttacagaagaaacttggccttgacatgggtgctgca
attggagtgaacactgaagacctgttcaatgatgaggatttggactatatacctacttca
gcttcacttataaacaaacaacctactcttcaggctgctgaattgattgattcggaattt
cgagctggtatgagcagtagacaaaagaataaagctaaaagaatggctaagctatttgca
aagcaaagatccagagacgcagtggaaactaatgagaagagcaatgatagtactgatggg
gaaccagaagaaaagagaagaaaagtaggaaatgttgtcctcagccagcctgccgctgac
tcgaaagttttggtagataatacatcagaagaggtaaatgaatggcctttggaaagcttt
tgtgaagaagtatgcaatgatctttttaacccatcatgggaggttcggcatggtgcaggc
actggactgagggaaatacttaaagcacatgggaaaagtggtggtaaaataggagacagt
acggtagaagagatggctcaacaacatcaggagtggttggaagacttagttattagactt
ctttgtgtcttcgcattagacaggtttggagactttgtttcagatgaagttgtagcacca
gtacgcgagacctgtgctcagactttgggagtggtattgaagcatatgaatgagactgga
gttcataaaaccgtggatgttcttctgaagttgctcacgcaggagcagtgggaagttaga
cacggtggccttctaggaataaaatatgctttggcagtccgtcaggatttgataaatagt
ttgttgcctaaagttttgcctgcaataattgaaggtctccaagacctagatgatgatgtc
cgagctgttgctgcagcatccttggtaccagtagtagaaagccttgttcaccttcagtca
caaaaggtgccttttattcttaatacattatgggatgctcttctggagttggatgatcta
acagcttccacaaacagtatcatgacacttctctcctcccttctaacttatccagaagtc
cgaaaatgcagtatccagcagtcgcttacagttttggtcccacgtgtatggccattcttg
catcacaccatatcatctgttcgaaaggcagcattggaaactttatttacactattatcc
acccaagaccagagttcttcaacctggctgactccaattctgcaagatatgttgagacac
atttttcagttttgtattttggaaagcaaccaagaaattcttgaccttattcataaggtg
tggctggaactgttaaacaaagcaccaatacaatatttggtagcagctgcttgcccttgg
atgggagcttggctctgcttaatgatgcaaccttctcacttacctattgatttaaatatg
ttgttagaagtaaaagcgagatcaaaggaaaaaacaggtggcaagctacgtcaaaatcta
acccaggccaaggaggtgatacaagagtatattgctggtgcagacagtattacagaagat
cctgtaaccagggattatgttgttatgcgagcacggatgatggcagcaaaattgttagga
gcactttgctgttgtatttgtgagccgagcgtaaatactgttactcaagaagtaaagcca
gctgaatcgctatcccagttactgcttttccatttgaattccaagtctgccttgcaacgg
attagtgtcgctttagtcatctgtgagtgggctgccttacaaaaggaatgtaaaactatt
gtcttttctgtgcaccctcgcttacttgaagtcctctctgagcacctgtattatgatgaa
attgctgttccttttacccgaatgcaaaatgaatgtaaacaattcatttcatcactagct
gatgcacatattgacattgcgaacagagtaaactgcagtgtatttacaatagatcaagct
aatgagctggttactactgttttcaatgaagttacatctccctttaatttgaatagtaaa
gctttacaacagttagacagcaaacgacaacaagtccaaatgactgttacagaaacaaat
caggaatggcaagtgttacatttgcgagtccatactttcactgcctgtgctgttgtgagc
ttgcaacaattgccagaaaaactaaatcctgttataaaacctttgatggaagctgtcaaa
aaagaagaaaatacactggtacaaaactatgcagctttatgtatagccaagttacttcaa
caatgtacaccaagatctccctgtcccaattcaaagattgtaaaaaacctctgcagctca
ctttgtgtggacccacatcttacacctttagcatcatgtcctgcacagcctcaaagcagc
caggaaaattctaaaggacccaactctgatagagatgggatgcatcatactgttaccaag
cacagaggaataataacactatacagacatcaaaaagctgcttttgctatcacaagtagg
cgaggtcctacaccaaaggctccaaaagcccaaattccagaccttcctactggcagcagt
ggaaacatccctacagaacttgatgaggctcagaaaccatatgttgtgcagaggagagga
gctgaatttgccttgtctactatagctaaacattttggtgctgaaatggcaacaggatta
ccacatctctgggatgctatggttggtccattaaggatcaatattaacacagataacttt
gatcgaaagtcattattggaaaaaggagatacttctgcccaagaggtggtgaattccctc
caagtttttgaaacaacagcagcttccatggatgttcagctccaccctttgttgatacaa
catttgcctcatctttacatgtgccttcagcatcccagtactgcagtgagacacatggct
gctcgttgtgtaggtgtcatgagcaaaatagctaccatggaaaccatgaatattttttta
gaaaaggttcttccatggctgggagcaatagatgacaacaccaaacaagagggtgcaatt
gaagcacttgcctgtgtaatggaacagctagatgttggtattgttccatatattgttctc
ctagtggtcccagttctgggtagaatgagtgatcagacggacagtgtacgtttcatggct
actcagtgctttgcaacactaattagactaatgccactcgaggctggcattccagatccc
ccagatatgtctgaagaattaatccgagtgaaagccaaagaacgacactttctggaacaa
ttattggatggtaaaaaactggaaaattataaaattccagtccccatcaaagcagagctc
agaaaatatcagcaggacggtgtgaattggttggcatttctcaataagtacaaacttcat
ggaattctttgtgatgatatgggtttagggaaaactttgcagtccatttgcattcttgct
ggagatcattgcctcagggctcaagaatatgcaagaactaaactagtagacagtgttcct
cttccatccttggtggtatgtcccccaacacttacaggtcactgggtggatgaagtcgga
aaattttgctccagagaatatctcaatcctttgcactacactggacctcccacagaaaga
gcaaggttgcaacaccaggtgaaaagacataatctcatagtggcatcatatgatgttgta
cgaaatgatattgatttcttcagaaatattaagtttaactactgtattcttgatgaaggc
catgtaataaaaaatggaaaaacaaaattgtcaaaagcagtaaagcagttaacagccaat
tacaggataattctttctgggacaccaattcagaacaacgtcttagagttgtggtcattg
tttgacttccttatgccaggatttttgggtaccgaacgccagtttgcagctcgttatggc
aaaccaatattggcaagtagagatgctcggagctccagtcgcgaacaagaggcaggagtt
cttgcaatggaagcactacaccgtcaagttcttccatttctgttgaggagaatgaaagaa
gatgtgctacaggatcttccacccaaaataattcaggattattactgtactcttagtcct
ttacaggttcagctttatgaagattttgccaagtctcgtgccaaatgtgatattgatgaa
actgtttcatcaatttcactgacagaagaaactgaaaagccaaagcttaaagctacaggg
catgtgtttcaggcactgcagtatttgcggaaactgtgcaaccatccagcattagtgtta
acaacccagcatccagaatacaagagaatcacagagcagcttgcagctcttaacacatct
cttcgagatattcagcatgcacctaaactgtctgctttaaaacaacttttactagactgt
ggtttaggaaatggtggatcttcagagagtggcacagaagctgttgtggcccagcacaga
atacttatcttttgtcagctcaagagcatgctggatatagtagaacatgaccttctcaaa
cctcacttaccctccgttacatatttgcgactggatggcagcatacctgctggtcagagg
cattccattgtttcacgatttaataatgacccatccatagatgttcttttgcttaccact
catgttggtggactgggacttaacttaacaggagctgatacagtagtgtttgtggaacat
gactggaacccaatgagagatctccaagcaatggatcgagcacatcgtattgggcagaaa
cgtgttgttaatgtatatcgccttataacaagaggaactttagaagagaaaattatgggt
ctgcagaagttcaaaatgaatattgcaaacactgtgattagccaagagaatgctagccta
caaagcatgggaacggatcagcttcttgacctattcactcttgacaaggatgggaaacct
gaaaaagcagacacttcatcatcgtctgggaaggcgtccatgaaatcagttcttgaaaat
cttggagaactttgggatcaggaacagtatgactctgaatacagtctagaaaattttatg
cattcactgaagtaa
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integrated database retrieval system
