Alligator mississippiensis (American alligator): 102573608
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Entry
102573608 CDS
T03087
Symbol
SEMA6C
Name
(RefSeq) semaphorin 6C
KO
K06842
semaphorin 6
Organism
amj
Alligator mississippiensis (American alligator)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
102573608
NCBI-ProteinID:
XP_019334534
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All DBs
Position
Un
AA seq
1119 aa
AA seq
DB search
MGGDPHTRTPGSHGGGVSCLHMWPALDLTSLFPLQPCWTPWTSPEPPWLPSGAVKLPWTR
EPQGWRQVSKGWRSPRPCWEDSCLHRAAPGTAARMPCSLPAVALLLLALTRSLPAATLSF
PGDLVPLSTVGLTSTSQYPWFRGLAGDNDTAQLGLDFQRMLRLNQTLFIAARDHVYAFDL
QWAKELLCPDRYLTWKTQDVDNCAMRGKLRDECYNYIKVLVPKDDRTLFACGTNAFNPMC
RTYKISSLEQEGEELNGQARCPFDAKQTNVALFADGNLYSATVADFQASDAVIYRSLGER
SPMLRTVKYDSKWLREPHFLHALEHGSYVYFFFREISMEYTTLGRVVFSRVARVCKNDLG
GSPRVLEKYWTSFLKARLNCSVPGDSFFYFDVLQAVTGVAQLNGRPAVFGVFTTQANSIT
GSAVCAFYLDDIERVFRGRFKEQRSPDAAWTPVPEDKVPKPRPGSCAGSGTAGAYRSSSE
FPDETLAFIKSYPLLDEAVPSATGRPLFTKTASRYRLTQLAVDPGAGPHRNHTVMFLGAE
DGTVLKVLLGSTANTSLEPVLLEDINLYSPARCTVRQENRRILGLELDTAHHVLYVAFSG
CMVRVPLSRCEAHGACRRSCLASRDPYCVWLRTGACVAFGNDIRAGFEQDVENVAGNLGG
CQDVATATGNRNSASDSAYGNTGPTTSVVPYQVPTDQPPVGTAPDAHPAPGAGDPRSTLR
VAVSTQGVRQDVEGRDSAKTVHFTFLIGCVLVAFVLGAASAGLLVSCYCSHLFQKAKRAG
KEPEGALPRPLSLRSLAKMNGLLDAPPGKDGRPEGPSPKLYTTLLPHEKEPPRAKEHPEL
SGLPTPESTPELPVKNVVAVRSPWERNHNANNAKEAQGKAQLFPGTATQGYPFASGLRGY
DMMPGGCGEEKKAPHAERVLVRPSAGMEVTTLEELLRHLHEATGPPHTTLGGMPLAQPAA
SPPGALSFANRVQPKIPDTESAPYYSSSTLPRDSLPRRLDVPPDPAPQPCPEKQPLPRPP
GHRHSLVNVGGGGGGLLSRQHSLSQATRPHPSLLTRVHSAGTPGPLAGHAAFLPRQRQGS
LPQAAGGGIKGAGAAKPSVPPKPVFMPSSPVKPAGQFNY
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggggggagacccccacacccggacacctgggtcccatggcgggggggtctcatgtctc
cacatgtggccagctctggatctcacctctcttttccccttgcagccctgctggaccccc
tggacgtcacccgagcccccctggcttccctcaggtgctgtcaagctgccgtggacccgc
gagccccagggctggcggcaggtgagcaaaggatggcgcagccctaggccctgctgggaa
gattcctgcctgcaccgcgctgctcccgggacggccgcgaggatgccctgctccctccca
gctgtggctctgctcctccttgcccttacccggagcctcccggcggccacgctgtccttc
cccggagacctcgtccccctcagcaccgtgggcctgacaagcacgtcccagtacccctgg
ttccggggcctggcgggggacaatgacacggcccagctcggcctggacttccagaggatg
ctacggctcaaccagacactcttcattgccgcacgggaccatgtgtatgcctttgatctc
cagtgggccaaggagctgctgtgtccagacaggtatctcacatggaagacgcaggacgtg
gacaactgtgccatgcgcgggaagctcagggacgagtgctacaactacatcaaggtgctg
gtgcccaaggatgaccggaccctctttgcctgtgggacgaatgccttcaaccccatgtgc
cgtacctacaagatcagcagcctggagcaggagggggaggagctgaatggccaggcccgc
tgcccctttgatgccaagcagaccaacgtggccctctttgcagatgggaacctctactca
gccacggtggctgacttccaagccagcgacgcggtgatctaccgcagcctgggcgaacgc
agccccatgctccgcacagtcaagtacgactccaagtggctgcgagaaccgcacttcctc
catgccctggagcatggcagctatgtctacttcttcttccgggagatctccatggagtac
accacgctgggccgggtggtgttctcgcgggtggcacgcgtgtgcaagaatgacctgggc
ggctcgccccgtgtgctggagaagtattggacctctttcctcaaggcccggctcaactgc
tctgtgcccggcgacagcttcttctacttcgatgtgctgcaggctgtcaccggtgtggcc
cagctaaacgggcggcctgccgtctttggcgtcttcaccactcaggccaacagcatcacc
ggctcggctgtctgtgccttctacctggatgacatcgagcgtgtgttcagagggaggttc
aaggagcagcggagcccagatgctgcctggacgcctgtccctgaagacaaggtgcccaag
cccaggccaggctcttgtgctggctccgggactgcaggcgcctaccgcagctccagtgag
ttccccgatgagaccctggccttcatcaagtcctacccactgctggatgaggccgtaccc
tccgccactggccggcccctcttcaccaagacggccagcaggtaccggctgacccagctg
gctgtggaccctggcgctggcccccaccgcaaccacacggtgatgttcctgggtgccgag
gatggcacggtgctcaaggtgctgctgggcagcacagcgaacaccagcctggagcccgtg
ctgctggaagatatcaacctctacagcccagccaggtgcaccgtgaggcaggagaacagg
cggatcctgggcctggagctggacacagcgcatcacgtgctgtatgtggccttctcaggc
tgcatggtgcgcgtgccgctgagccgctgtgaggcccatggtgcctgcaggaggagctgc
ctggcctcccgagacccgtactgtgtctggctgaggacaggagcatgcgtggcgtttggg
aatgacatcagggctggcttcgagcaggatgtggagaacgtggctgggaacctcgggggc
tgccaagatgtcgcaaccgccacggggaaccgcaacagcgccagcgactcggcgtacggg
aacaccggccccaccaccagcgtcgtgccctaccaggttcccacagatcagcccccagtg
ggcacagccccagatgcccaccctgcccctggcgctggggacccgcgctccaccttgcgc
gtggctgtcagcactcagggggtgcggcaggatgtggagggcagagacagcgccaagact
gtgcacttcaccttcctcatcggctgcgtcctggtggctttcgtcctgggcgctgcctcc
gccggcctcctcgtctcctgctactgcagccatctcttccagaaagccaagcgagccggc
aaggagcccgagggtgccctcccacgcccgctctccctgcgcagcctggccaagatgaac
gggctgctggatgccccaccaggcaaggacgggcggcctgagggcccctcacccaagctc
tacaccacgctgctgccccacgagaaggagccgccccgcgccaaggagcatccggagctc
tcggggctgcccacgcccgagtccacccctgagctgcccgtgaagaacgtggtggccgtt
cggagcccgtgggagaggaaccacaacgccaacaatgccaaggaggcccagggcaaggcc
cagctgttccctggcactgccacccagggctacccctttgccagcggcctccgcggctat
gacatgatgccgggaggctgcggggaggagaagaaggcgccgcatgcagagagggtgcta
gtgcgcccgtcagctggcatggaggtgaccaccctggaggagctcctcagacatctccat
gaagccactgggcccccgcacaccacgctgggtgggatgcctctggcccagccggccgcc
agcccccctggcgcactgtcctttgccaaccgggtgcagcccaagatccccgacacggag
agcgctccctactacagctcctccaccctgcccagggacagcctgccccggcgcctggac
gtgccccccgaccctgccccccagccctgcccagagaagcagccactgccccggcctcca
ggccacagacactcgctggtgaacgttggtggcggtggcggcgggctcctctcacggcag
cacagcttgagccaggccacgcggccacacccatcgctgctgacacgtgtgcactctgcg
ggcacgccagggcccctggccggccatgccgccttcctcccgcgccagcgccagggctct
ctgccccaggctgctggcggcggcatcaagggggcaggtgccgccaagcccagtgtgccg
cccaaaccggtcttcatgccctcgtcccctgtgaaacctgccggacagttcaactactga
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