Alligator mississippiensis (American alligator): 102573812
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Entry
102573812 CDS
T03087
Symbol
SPAST
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102573812 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amj04812
]
102573812 (SPAST)
Enzymes [BR:
amj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
102573812 (SPAST)
Membrane trafficking [BR:
amj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
102573812 (SPAST)
Cytoskeleton proteins [BR:
amj04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
102573812 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_22
AAA_5
TIP49
AAA_16
Mg_chelatase
AAA_14
IstB_IS21
AAA_24
DUF815
NPHP3_N
nSTAND3
AAA_2
MIT
Motif
Other DBs
NCBI-GeneID:
102573812
NCBI-ProteinID:
XP_019356122
LinkDB
All DBs
Position
Un
AA seq
478 aa
AA seq
DB search
FSAGQKEQAIEWYKKGIEELEKGIAVLVVGQGDQCERARRLQSKMMTNMAMAKDRLQLLE
KLQAVLQISKPQMEVYNDSTNLACRNGHLQSESGAIPKKKDPLAHTSNSLPRSKTVAKTG
PTGLSGHHRTPSYSAISAVSRQGTNPATSTHKVTPKNSRTNKPSTPTTAARKKKDLKIFR
NVDSNLANLILNEIVDSGPTVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGL
LLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSII
FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMGATNRPQELDDAVLR
RFTKRVYVSLPNEETRLILLKNLLSKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAAL
GPIRELKPEQVKNMSASEMRNIKLTDFTESLKKIKRSLSPQTVDAYIRWNKDFGDTTV
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
ttttcagcaggacaaaaggagcaagctattgaatggtataagaaaggaattgaagaactg
gaaaaaggaatagctgttttagttgttggtcaaggtgatcagtgcgaacgagcacgacgt
ctacagtctaagatgatgactaatatggctatggccaaggatcgtttgcagcttctagag
aagctgcaggcagttttgcaaatttccaagccgcaaatggaggtctataatgacagtact
aacctggcatgccgcaatggacatctccagtcagaaagtggagcaattccaaaaaagaag
gatccattagcgcacacaagtaattctcttcctcgttcaaaaaccgttgcaaaaactgga
cccacaggtctttcaggtcaccatagaactcctagttacagtgcgatatcagctgtatct
agacaaggaactaatcctgcaacttcaacgcacaaggttactccaaaaaatagcagaact
aataagccttctactcctacaacggctgctcgaaaaaagaaagacttgaagatttttaga
aatgtggacagcaatcttgctaatcttattctgaatgaaattgttgacagtgggccaact
gttaaatttgatgatattgctgggcaggagctggctaagcaagcactgcaagaaattgtt
atccttccctccctcagacctgagttatttacaggacttagagctcctgcacgaggactg
ttgttgtttggccctccaggaaatggaaaaacgatgttggccaaagctgttgctgcagaa
tcaaatgcaaccttctttaacataagtgctgcaagcctaacttccaaatatgtgggtgaa
ggtgagaaacttgtgcgcgcgctgtttgccgtagccagggaacttcagccttctataatt
tttatagatgaagttgatagccttttatgtgaaagaagagaaggcgaacatgatgctagt
aggcgcctgaaaacagaatttttaatagaatttgatggtgtgcagtcttctggagaagac
agaatacttgtaatgggggcaactaacaggccgcaagagcttgatgacgctgttctcaga
cggttcaccaaacgggtgtatgtatctttaccaaatgaggagaccagactgattttacta
aaaaaccttttaagcaagcaaggaagcccattgacccaaaaagagctggcccaactagct
agaatgacagatggatattcaggaagtgatctaactgcactagcaaaggatgcagcactg
ggccctattcgagaactaaaaccagaacaggtgaagaatatgtcagcaagtgagatgagg
aatatcaaattgacggatttcacagagtctttgaagaagataaagcgcagtttgagccct
caaaccgtggatgcatacattcgctggaacaaggactttggcgataccacagtttga
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