KEGG   Alligator mississippiensis (American alligator): 102573956
Entry
102573956         CDS       T03087                                 
Symbol
SF3B4
Name
(RefSeq) splicing factor 3b subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102573956 (SF3B4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amj03041]
    102573956 (SF3B4)
Spliceosome [BR:amj03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    102573956 (SF3B4)
 Complex B
    102573956 (SF3B4)
 Complex C
   U2 SnRNP specific factors
    102573956 (SF3B4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 102573956
NCBI-ProteinID: XP_006263198
UniProt: A0A151NTN1
LinkDB
Position
Un
AA seq 417 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSVPTPVVTSLGPGVTPPGIPPP
GSFPPPVPPPGAMPPGMPPAMPPPPMPPGAGAPGPPSGAAPSGGHPPHPHPFPPGGMHHP
GMPPMQVHHGPPGMGQHHPGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPHFGSPMGHP
GPMPHHGMRGPPPLMPPHGYSGPPRPPPYGYQRVPMPPRPAQRPPVPPRGPLRGPLP
NT seq 1254 nt   +upstreamnt  +downstreamnt
atggcggccgggcccatctcggagcggaaccaggatgccaccgtctacgtcggcggcctg
gacgagaaggtcagcgagccgctgctgtgggagctcttcctccaggctggccccgtggtc
aacacgcacatgcccaaagaccgggtcacgggccagcaccaaggctacggctttgtggag
ttcctcagtgaggaggatgccgactatgccatcaagatcatgaacatgatcaagctgtac
gggaagcccatccgggtgaacaaggcctcggcacacaacaagaacctggacgtgggcgcc
aacatcttcatcggcaacctggacccagagatcgacgagaagctgctgtacgacaccttc
agcgccttcggcgtcatcctgcagacacccaagatcatgcgggaccccgacacgggtaac
tccaagggctatgccttcatcaacttcgccagcttcgacgcctcagacgctgccatcgag
gccatgaacgggcagtacctctgcaaccgccccatcaccgtctcctacgccttcaagaag
gactccaagggcgagcgtcatggatcagcagctgagcgcctcctcgctgcccaaaaccct
ctctcgcaggctgaccggccccatcagctgtttgcagacgcccctcctccgccgtctgtg
cccaccccggttgtcacatccctgggccccggggtcacaccaccaggcatcccacccccc
ggctcgttccccccaccggtgccaccccctggagccatgcccccaggaatgcctcctgcc
atgccccctccacccatgccaccaggcgctggtgcccctggcccaccatctggagctgca
cccagtggaggacacccaccgcacccacatcccttcccaccgggcgggatgcatcaccca
gggatgccgccaatgcaggtgcatcatggaccccctggcatgggccagcaccacccggga
cccccgggctccggcgggcagcccccaccgcgcccaccccctggcatgccgcacccaggg
cccccgcctatgggcatgccgccccgtgggccacacttcgggtcccccatgggtcacccc
ggccccatgccgcaccatgggatgcgtgggccgcctccgctgatgcccccccacggctac
agtggccccccacggccaccaccttatggctaccagcgggtcccaatgcctccacgacca
gctcagagacccccggtgcccccacggggccccctgcgaggacccctgccttag

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