Alligator mississippiensis (American alligator): 102574050
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Entry
102574050 CDS
T03087
Symbol
SHANK3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
amj
Alligator mississippiensis (American alligator)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SH3_2
SAM_2
Ank_3
Ank_5
SH3_9
PDZ_6
PDZ
SH3_1
2C_adapt
FERM_f0
Motif
Other DBs
NCBI-GeneID:
102574050
NCBI-ProteinID:
XP_019353206
LinkDB
All DBs
Position
Un
AA seq
1730 aa
AA seq
DB search
METPPPLEKCLRLNPDVPIWVSKQRILCTLNHSLKDVLNYGLFQPAFNGRAGKFLDEERL
LREYPLNPDTPVPYLEFRYKRRVYTQSLLDDKQFAKLHTKANLKKFMEYVQMLNVEKVCR
LLEKGLDPNFHDPDTGECPLTMAAQLEYSADTVKALRNGGAHLDFRTREGMTALHKAVRC
RNHAALMTLLDLGASPDYKDSRGLTPLYHSAMVGGDPYCCELLLHDYAKVGCIDENGWQE
IHQACRYGHVQHLEHLLFYGADMTAQNASGNTALHICALYNQESCARVLLFRGASKEIRN
YNSQTAFQVAIIAGNFELAEIIKTHKESDVVPFRETPSYTKRRRITGAGGLSSPRLLQRS
ASDNNLKAESRPSYSPVPSLRSLPPQLLAQMQEAADAERDACETSNSNAPRYGRAGEGPV
TSSGPGGPGPTPGPAPAPHAPHAPLPGPKRKLYSAVPGRRFIVVQSYAPQGDGEIQLNRG
EAVKVLSIGEGGFWEGTVKGRTGWFPAECVEEVQMRHDARQETREDRTKRLFRHYTVGSY
DNFTSHSDYIIEEKTAVLQKREHEGFGFVLRGAKAETPIEEFTPTPAFPALQYLESVDVE
GVAWRAGLRTGDFLIEVNGVNVVKVGHKQVVSLIRQGGNHLVMKVVSVSRKPESEEVVRK
KAPPPPKRAPSTTLTLRSKSMTAELEELASMRRRKGEKLDEILAAAEPSLRADIVEADSR
AATVKQRPTSRRITPAEISSLFERQGMAAHSGVHTGAEKPHVSLRKGIPRTKSVGEDEKL
TASLMDGKFPRSTSMQDTVREGHGIPPPPQTAPPPPPSPYYFDTGPPPSFSPPPPPGRAY
DTIRSSFKPSLEAKLHGLPQVISAAEMYDQARTSVPYPERQKRARSMIILQDSSHLPVEP
TEIPRPGPSATPPEKLKRKGRVIDNPYANMGQFNVSLFAPTKPQRKKSPLVKQLQVEDAQ
ERAALSIVGGFTREPSPTRRSHRLSGIEYQHHPGIAQVEPTSIPFATAIAGVMKDRDRRL
DEKRKSTVFLSVGAIEGSPPSIDMPSLQQSRSIDERLLGSRDVLLPSPVSALKPLISSSS
STFIHPLTGKPLDPNSPLALALAARERALSTQVPSRSPTPIHSPDSERAAPLFVDIQTKE
PERGELEGLVSPAFSPGGKGAVGADSGALAPAKSQWGTPTTVRKEMEIRAETPGKEEKKP
EDKKSMIISIVDTSQQKTAGLIMVHATSNGQDEIGLEVKEEKPAVPEECTEPAELPKAET
QPSPVGKPPVSPVSDKTLGQGSSEEEVEPYTVTLPPAQLSSSDEETREELAKIGLVPPPD
EFANGVLVTTPGTPISQLAKPSTPSIPAAAVAPSTTGGTPSGKPSDAPGAPESAADSGVE
EVDTRSSSDHHLETTSTISTVSSMSTLSSESGEPTDTYTSFADGQTFILEKPPVPPKPKL
KSQLSKGPVTFRDPLLKQSSDSELISQQHAATLASASVGRPRYLFQRRSKLWGDPMESRP
VHGADDDKPTVISELSSRLQQLNKDTRSLGEEPTGSTLDPGKKSPVVAARLFSSLGELST
ISQRSSGTTYTVRPGSRYPVTRRTPSPVKPALDRTEPLSTVRPYGLTPPTILKSSSLSIP
HEPKEVRFVVRSVSARSRSPSPSPSPGPPLHTLHPPRPFMQKPLHLWNKYDVGDWLESIN
LVEHRDKFEDNEIEGTHLPALTKEDFVELGVTRVGHRMNIERALKQLVDS
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atggagactcctccacctctcgagaaatgtctacggctaaatcctgatgttcccatatgg
gtctccaaacagcgcattctctgcaccctgaaccacagcctcaaggatgttttgaactac
gggcttttccagccagccttcaatggccgggctggaaaattcctggatgaggagcggctg
ctgagggaatacccgctgaatcctgacactcctgtcccctacctggagttccggtataag
aggcgtgtgtacacccagagcctgctggacgacaagcagttcgccaagctccacaccaag
gcaaacctgaagaagttcatggagtacgtgcaaatgctaaatgtggagaaggtctgcaga
ctgctggagaagggactggaccccaacttccatgatccggacactggagaatgccctctg
accatggcggcccagctggagtacagtgcggacaccgtcaaggccctgaggaacggagga
gctcacctggacttcaggactcgggagggcatgacagctctccacaaggccgtccggtgc
cggaaccacgccgccctgatgacgctcttggatctgggcgcctccccggattacaaggac
agcagaggattgactcctttgtaccacagcgccatggtgggaggggacccgtactgctgc
gagcttctgctgcacgactacgccaaggtcggctgcatagatgagaacggctggcaggag
attcaccaggcatgtcgctacggccacgtgcagcacctggagcatcttctcttctacgga
gccgatatgacggcgcagaacgcctcaggaaacactgcgctccacatctgtgctctctac
aaccaggagagttgtgcccgggttctcctgttccgcggggcgagcaaagagattcgcaac
tacaacagccagaccgcgttccaggtggctatcattgcaggaaattttgaactggctgaa
atcatcaaaacccacaaagagtccgatgttgtgccttttagagaaacccccagctacacg
aagaggagacggatcacgggtgccggcggcctctcctccccgcgcctgctgcagcgctcc
gccagcgacaacaacttgaaagccgagagccgcccgtcgtactcgccagtgccctcgctc
cgcagcctgcccccacagctgctggcgcagatgcaggaagcggctgacgctgaacgagat
gcatgtgaaaccagcaacagcaatgcaccgagatatgggagagctggagaaggtccagtc
acaagttcaggacctggggggccagggcccacnccgggccccgcgcccgccccgcacgcc
ccgcacgcgccgctgcccgggcccaagcgcaagctgtacagcgccgtgcccggccgccgc
ttcatcgtggtgcagagctacgcgccgcagggcgacggcgagatccagctcaaccggggc
gaagccgtcaaggtgctgagcatcggcgaaggtggtttctgggaaggaacggtgaaagga
cgcactggctggttcccggcagaatgtgttgaagaggtgcagatgcgacatgatgcacgg
caagaaacaagagaagacaggacaaagcgtctcttccgacattatactgtgggttcttat
gacaacttcacctctcacagtgactacatcattgaggagaagacggccgtgctgcagaag
agggagcatgagggattcgggtttgtgttgcgaggggccaaagcggagactccgattgag
gagttcaccccaacccccgctttcccagctctccagtacctggaatccgtggacgtggaa
ggtgtggcctggagagcaggactccgcactggggactttctgatagaggtgaatggtgtg
aacgtggtgaaggtggggcacaagcaggtggtgtccctgatccgtcaagggggaaaccac
ctggtgatgaaagtcgtctctgtcagccgcaagccagaatcggaagaagtcgttcggaaa
aaggccccaccgccgcccaagagagcccccagcaccacgctgacgctgcgctccaagtcc
atgacggcagagctggaggagctagcctcgatgcggaggagaaaaggggagaaactggat
gaaatcttggcagcagctgagccctctctgagagccgacattgtggaagcggattccagg
gcggccactgtgaagcaacgaccgacaagccggcgcatcacgccagcagagatcagttca
ctattcgagcgccaggggatggcagcgcattcgggggtccacactggggcggagaaaccc
cacgtctcgctacgcaaaggaattccacggaccaagtccgtaggtgaagatgagaaactc
accgcttctttaatggatgggaagtttccgcggagcacttcgatgcaagacacagttagg
gaagggcatggcatcccacccccgcctcagacagctcctcccccgcctccgtctccatat
tactttgacacgggccctcccccatccttctccccaccgccgccccccggaagagcttat
gacaccatcagatcgagctttaagccaagcctggaggccaagctccatgggctcccacag
gtgatcagtgcagctgaaatgtacgaccaggcaaggacgtctgtgccctaccctgagcgg
caaaagagagcccgatccatgataatcctacaagactcctctcatcttcctgttgaaccg
acggaaatcccccggcctggcccctccgccacccccccagagaagctgaaaaggaaaggg
agagtgatcgacaacccttacgccaacatgggccagttcaatgtcagcctgtttgctccc
accaagccccagaggaagaaaagtccactggtcaagcagctccaagtagaggatgcgcag
gagagagcagctttgtccattgtgggaggcttcacgagggagccctctcccacgcgcagg
agccatcgcctgagtggcattgaatatcagcaccaccctggcatcgctcaggtcgagccc
acaagcatccccttcgccactgccattgccggagtcatgaaggacagagaccgtcgtctg
gatgagaagcggaaatccactgtcttcctctcggttggggccattgagggaagccccccc
agcatcgacatgccatccctgcagcagtccaggtctattgatgagcggctgttaggaagc
cgagatgtgctactgccttcacctgtctcagctttaaagccattaattagcagctcatcc
tcaacattcatccatcccctgacaggaaagcccctggatccaaactcaccactggcactt
gcgctggccgcaagggagcgggccctgtccactcaagtcccatccagatcgcccacccca
atccacagcccagattcagaaagagcagcacccctgtttgtggacatccaaaccaaagaa
ccagaaaggggggagttagagggcttagtgtctcctgctttctcacctggaggcaaaggg
gcagttggagcagattctggagctttggcccctgcaaagagccagtgggggaccccgacg
acagtgaggaaggagatggagataagagcagaaacacctgggaaagaggaaaaaaaacca
gaagacaagaagtccatgatcattagcatagtggacacatcacagcaaaagacagcaggc
ctcatcatggtccatgcaacaagtaatggccaagacgagataggacttgaggtgaaagag
gagaagccagctgttcctgaagaatgcacggagccagcagagctgcccaaggcggagacc
cagcccagccctgtgggaaagcctccggtaagtccagtctctgacaaaacattgggacaa
gggagttcagaggaggaagtggagccctacacagttaccctcccgccagcccagctgtcc
tcaagcgatgaagagaccagggaggagctggccaagattgggctggtgcctccaccagat
gagtttgcgaacggggtactcgtcaccacacctggcacaccaatcagccaactggcaaag
cctagcacgccatccataccagcggcagcagtagcaccttctaccactggtggaacaccc
tcagggaagccctctgatgcccccggagccccagagtctgctgcagactcaggagtggaa
gaggtggacaccagaagttcaagtgaccatcacctggagacgacaagcaccatctctacc
gtctccagcatgtctacgttgtcctcagagagtggggagcctacagatacatacacttcc
tttgcggatggacaaacttttatactcgagaagccaccagtgcctccaaagccaaaactc
aagtcccagctcagcaaggggccagttactttcagggacccacttttgaagcagtcttcg
gacagcgagctcatctcccagcaacatgcggccacgctggcttcagccagtgttggtcgg
ccacgctacctctttcagagaaggtccaagctatggggggaccccatggagagcaggcca
gtccacggggctgatgatgacaagccaactgtgatcagtgagctaagttcccggctacaa
cagctgaataaggatacgcgatcactgggggaggaacctaccgggtccactttagatccc
gggaagaagtcacctgtggtcgcagcacgacttttcagtagtttaggagaactcagcacc
atttcccagcggagctccggaaccacctacacggttcgacccggcagccgctaccccgtc
acccgacgtactcccagcccagtgaagcccgccctggatcggacagagcctctcagcacc
gtgcggccctacggcctgaccccccccaccattctcaaatcttccagcctctccatccca
catgagcccaaggaggtgcgcttcgtagtgcgcagcgtgagtgcccggagccggtccccg
tccccctcaccctctcctgggccacccctgcacacgctccacccaccacggcccttcatg
cagaaacccctgcacctgtggaacaagtatgatgtaggggactggctggaaagcatcaac
ctggtggagcaccgagacaagtttgaggacaatgagatcgagggcacacacctgcctgcc
ctcaccaaggaggacttcgtggagttaggggtcacacgggtggggcaccgcatgaacatt
gagcgggcactcaagcagctggtcgacagctga
DBGET
integrated database retrieval system
