Alligator mississippiensis (American alligator): 102574120
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Entry
102574120 CDS
T03087
Symbol
DSCAML1
Name
(RefSeq) DS cell adhesion molecule like 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amj04515
]
102574120 (DSCAML1)
Cell adhesion molecules [BR:
amj04515
]
Immunoglobulin superfamily
DSCAM family
102574120 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
Adeno_E3_CR1
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
102574120
NCBI-ProteinID:
XP_019346424
LinkDB
All DBs
Position
Un
AA seq
2052 aa
AA seq
DB search
MWLVTFLLLYSLHGARADDVGTSLYFVNDSLQQVTFSSTVGVVIPCPAAGSPSAVLRWYL
ATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKA
VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITSYGG
LYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTILDGFQSREVRTGQ
LVELPCIASGYPNPAIRWIKDGRPLPADSRWTKRITGLTISDMRVEDSGTYICEVTNTFG
SAEVTGTLSVIDPLRVTLTPKKLKTGIGSTVILSCTLVGSPEYAIRWYRNTDLVVVDDYI
SIRGISNETLLITAAQKSHSGAYQCFATRKAQTAQDFSVIVLEDGTPRIISSFSEKVVNP
GELFSLMCAAKGAPPPTVTWALDDEPIQRDNGHRTNQYTMSDGTTVSHMNVTSPQIKDGG
VYRCAARNSVGSAEYQARINVRGPPSIRTMRNITAVAGRDTFINCRVIGYPYYSIKWYKD
SLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQP
FEFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVILSGSGVTIESKEFMSSLQISSVSL
KHNGNYTCIASNDAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKV
MWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSM
FLTVKIPAMITSHPNTTIAIKGQMKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAIAT
KDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKAR
SMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIR
MYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPMTSQSIQVTWKAPKKELQNGVIRG
YQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEI
NATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGE
MQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVP
SSASSVVVSWLPPTKPNGIIRKYTIFCSSPGSGQPAPSEYETSPDQLFYRIAHLNRGQQY
LLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPVPAI
KWTKDSEDSAIPVTVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQ
VPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFK
LDSLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHINATHARLNLQ
GWSSGGCPITAIVLEYRPKGNWVWQSLRTNSSGEVFLTELREATWYELRMKACNSAGCGN
ETTQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFIIRKKRKEKRL
KRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKAT
IPVTDTEFSQAVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKNVKSAHSTR
NRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVST
ESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTP
SEPGICRFTASPPKPQDSDRGKNVAVPIPHRANKSDYCNLPLYVKSEAFFRKPDIHDPCP
VVPPREASIRNLARAYHTQARHLTLEPGSKPLGLPHPGSSTTTLPQRTLTMPGSANAPSA
PAPATATAATAAASAPTATAADSTPAPSAEPRLSTHTKMGGSRDSLLEMSTSGIGRSQKQ
GAGAYSKSYTLV
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaacttttctcctgctctactcgttgcacggagcacgcgccgacgatgtt
ggaaccagcctctactttgtgaacgactctctgcagcaagttaccttctccagcacggtg
ggggtggtgatcccctgcccggccgcagggtcccccagcgccgtcctccgctggtacctc
gccacaggggacgacatctacgatgtcccgcacatccggcatgtccacgccaacgggact
ctgcagctctaccccttctcgccatcagccttcaatagctttatccatgacaacgactat
ttctgcaccgcagagaactcggcgggcaaaatcaggagtccaaatatccgcgttaaagca
gttttcagggagccttacaccgtccgggtggaggatcaaaggtcgatgcgtggaaatgtg
gctgttttcaagtgcctcatcccttcttcagtgcaggaatatgttagtgttgtgtcctgg
gagaaagacaccgtttctatcatcccagaaaataggttttttattacgtcctacggcggc
ttgtacatatcggacgtgcagaaggaagatgccttgtccacctaccgctgtatcaccaag
cacaagtacagcggagagacgcgccagagcaatggggccaggctctccgtgtcagaccca
gcagagtccatccctaccatcctagatggcttccagtccagggaggtgcggacaggccag
ctggtggagctcccctgcatcgcatcggggtaccccaacccggccatccggtggatcaag
gacgggcgcccactgcccgcggacagcaggtggaccaagcgtatcacggggctgaccatc
agcgacatgcgtgtggaggacagcgggacctacatctgcgaggtcaccaacacctttggc
tctgctgaggtcaccgggaccctctcggtcatcgaccctctgcgcgtgaccctcacgcca
aagaagctgaagacgggcatcggcagcacggtcatcctctcctgcaccctggtcggctcc
cctgagtacgccatccgctggtaccgcaacaccgacctggtggtggtggacgactacatc
tccatccggggcatcagcaacgagaccctcctcatcaccgccgcccagaagagccactcg
ggcgcctaccagtgcttcgccactcgcaaggcccagacggcgcaggacttctccgtcatt
gtgctggaggacgggaccccccggatcatctcctccttcagcgagaaagtggtgaacccc
ggggagctgttctcgctgatgtgcgccgccaagggcgccccgccgcccaccgtcacctgg
gccctggacgacgagccgatccagcgggacaacgggcaccgcaccaaccagtacaccatg
tcggacggcaccaccgtgagccacatgaacgtgacgagcccgcagatcaaggacggcggg
gtgtaccgctgcgccgcgcggaactctgtgggcagtgccgaataccaagcgcgaataaac
gtaagagggcccccgagcatccgcaccatgaggaacataacggccgtggcgggcagggac
accttcatcaactgcagggtgatcgggtacccttactactccatcaagtggtacaaggac
tccttgctgctgccggacaaccaccgccaggtcgtctttgagaacgggaccctgaagctg
atggacgtgcagaagggcatggacgagggggagtatctgtgtagtgtcctgatccagcca
cagctctccatcagccagagcgtccacgtcaccgtgaaagtccctccgctgatccagccc
ttcgagttcccgccggcctcgatcgggcagctcctgtacatcccctgcgtggtgtcgtcc
ggggacatgcccatccgcatcacctggcgcaaggacgggcaggtgatcctctcaggctcg
ggcgtcaccatcgagagcaaggagttcatgagctccctgcagatctccagcgtctccctc
aagcacaacggcaactacacctgcatcgccagcaacgacgccgccaccgtcagccgcgag
cggcagctgatcgtgcgagtgccgcctcgcttcgtggtccagcccaacaaccaggatggc
atctacggcaaagccggggtgctgaactgctcggtggatgggtacccccctccgaaggtc
atgtggaaacacgccaaaggaagcgggaacccccagcagtaccaccccgtgcccctcacg
ggccgcatccagatcctgcccaacagctcgctgctcatccgccacgtgctggaggaggac
atcggctattacctctgccaggccagcaacggcgtcgggacggacatcagcaagtccatg
ttcctcaccgtcaagatcccggccatgatcacatcccaccccaacacgaccatcgccatc
aaggggcagatgaaggagctgaactgcacggcccggggggagcggcccatcatcatccgc
tgggagaaaggcgacacggtcatcgaccccgaccgcaacatgcgctacgccatcgccacc
aaggacaacggcgacgaggtcatctccaccctcaagctgaagccagcagaccgcggcgac
tccgtgttcttctcctgccatgccatcaactcctatggcgaagaccgaggcctgatccag
ctcactgtccaagagcccccagacccccctgagctggagattcgggaggtgaaagcccga
agcatgaacttgcgctggactcagaggtttgatgggaacagcatcatcaccggattcgac
atcgagtacaagaacaagtccgattcctgggatttcaagcaatcgacccgcaacatctcc
ccgaccatcaaccaagcgaacattgtggacttgcacccggcctccgtgtacagcatccgc
atgtactccttcaacaagatcgggcgcagcgagcccagcaaggagctcaccatcagcacg
gaggaagcagctcccgacgggccccccatggatgtgaccttgcagccgatgacatcccag
agcatccaggtcacttggaaggccccgaagaaggagctccagaacggggtgatccgcggc
taccagatcggctaccgggagaacagccctggcagcaacgggcagtacagcatcgtggag
atgaaggccacaggcgacagcgaggtctacaccctggacaacctgaagaagttcgcccag
tatggcgtggtggtgcaggcattcaaccgcgccgggacggggccctcctccagcgagatc
aacgccaccacgctggaggacgttcccagccagcccccggagaacgtgagggcaatatcc
atcacgtctgacgtggccgtgatctcgtggtccgagcccccgcgcagcaccctaaacggc
gtgctcaagggctaccgagtgatcttctggtctctctacatggacggagagtggggcgag
atgcagaacatcaccaccacgcgggagcgcgtggagctgcggggcatggagaagttcacc
aactacagcgtgcaggtgctggcgtacacgcaggccggcgacggcgtccgcagcagcgtg
ctctacatccagaccaaggaggacattccaggccctcccgctggcatcaaagccgtgccc
tcctctgccagcagcgtggtggtgtcctggctgcccccaaccaagcccaacggcatcatc
cgcaagtacaccatcttctgctccagcccgggctccggccagccggcccccagtgagtac
gagaccagccccgaccagctcttctaccgcatcgcccacctgaaccgcgggcagcagtac
ctgctctgggtggcggccgtcacctcggcgggccgcggcaacatcagcgagaaggtcacc
atcgagcctgcggggaaagcccctgccaagatcatctccttcggcggcaccgtcaccacc
ccctggatgaaggacgtgaggctaccctgcaactcggtcggcgagccggtgcctgccatc
aaatggaccaaggacagcgaggactctgccatcccggtgacggtggacgggcaccgcctg
atccaagccaacggcacgctggtcctgcgctcggtgaaagcagaggattctgggtactac
acctgcaccgccaccaatacctggggctttgacaccatcatcatcaacctgctggtgcaa
gtgcccccggaccagccccgcttgaccgtgtctaaaacctccgcctcatccatcacgttg
gcctggatcccaggggacaacggtggcagctccatccgaggcttcgtgctgcagtactcg
gtggacaacagcgaggagtggaaggacgtgttcatcagctccagcgagcgctccttcaag
ctggacagcctcaagtgcggcacatggtacaaggtgaagctggcggccaagaacagcgtg
ggcgctgggcgcatcagcgagatcatcgaggccaagacgcatggcagagagccctccttc
agcaaggaccagcacctcttcacccacatcaacgccacgcacgcccggctgaacctgcag
ggctggagcagcgggggctgccccatcaccgccatcgtcctcgagtaccggcccaagggc
aactgggtctggcagagcctcaggaccaacagctccggcgaggtcttcctgaccgagctg
cgtgaggccacctggtacgagctgcgcatgaaggcctgcaacagcgccggctgcggcaac
gagaccacccagttcgccacgctggactatgacggcagcaccatcccccccatcaagtct
gcccagggggagggagatgatgtgaagaagcttttcaccatcgcctgccccgtgatcctg
gccacgctcggggtggcgctgctcttcatcatccgcaagaagaggaaggagaagcgcctg
aagaggctgcgcgatgccaagagcttggcagaaatgctgatcagcaagaacaaccggagc
ttcgatacgccggtgaaggggccgccgcaggggccgcgactgcacatcgacatcccccgc
gtgcagctgctcatcgaggacaaggagggcatcaagcagctgggggacgataaagcgacc
atcccggtgacggacacagagttcagccaggccgtgaacccccagagcttttgcaccggg
gtctcactgcaccaccccgctctgatccagaacaccgggcccttgatcgacatgtcagac
atccgacccggcaccaatcccgtgtccaggaaaaatgtgaagtctgcgcacagcacccgc
aacaggtactccagccagtggaccctcaccaagtgccaggcgtccaccccagcgcggacg
ctcacctccgactggaggacggtggggtcccagcatggcatcaccgtcacagagagcgac
agctatagcgctagcctgtctcaggatacagacaaggggcggaacagcatggtgtccacg
gagagcgcctcgtccacctacgaggagctggcgcgggcctacgagcacgccaagctggag
gagcagctgcagcacgccaagtttgagatcaccgagtgcttcatctccgacagctcctcc
gaccagatgaccacgggcaccaacgagaacgcagacagcatgacgtccatgagcaccccc
tccgagcccggcatctgccgcttcaccgcctcccctcccaagccgcaggacagcgacagg
ggcaagaacgtggcggtgcccatcccacacagggctaacaagagcgactactgcaacctc
cccttgtacgtgaagtcggaagcgttcttccgcaagcccgacatccacgacccgtgtccg
gtggtgccgcccagggaagcctccatccgaaacttggccagggcctaccacacgcaagcc
aggcacctgacgctagagccaggcagcaagcccttgggtctgccgcacccgggctcctcc
acaaccaccttacctcaacgaactctcaccatgccgggctcggcaaacgccccctcggcc
cccgcgcccgccaccgccactgccgccaccgccgctgcttctgctcccaccgccaccgcc
gctgactccacgcctgcccccagcgctgagccccgtctgtccacgcacaccaaaatggga
ggctctagagactcgttattagaaatgagcacgtccggcataggaaggtctcaaaaacaa
ggggccggagcctactccaaatcctacacgctggtgtag
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integrated database retrieval system
