Alligator mississippiensis (American alligator): 102574188
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Entry
102574188 CDS
T03087
Symbol
VARS2
Name
(RefSeq) valyl-tRNA synthetase 2, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102574188 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amj01007
]
102574188 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amj03016
]
102574188 (VARS2)
Enzymes [BR:
amj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
102574188 (VARS2)
Amino acid related enzymes [BR:
amj01007
]
Aminoacyl-tRNA synthetase
Class I (U)
102574188 (VARS2)
Transfer RNA biogenesis [BR:
amj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
102574188 (VARS2)
Prokaryotic type
102574188 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
102574188
NCBI-ProteinID:
XP_014463752
UniProt:
A0A151M5Z1
LinkDB
All DBs
Position
Un
AA seq
1092 aa
AA seq
DB search
MLLKRDGSIRSRCLSSLHQLLQLWTRPGPWAIPPGWRASSDSRISAQNWTQLKNKAEKQK
RQHKRLESIEAGVAQKSAVPQRRSKAWVPKDVVLYDIPTAPGQKKDTSVPLPASYSPRYV
EAAWYSWWEKEGFFKPEYQSQQPQRKAETFSLCIPPPNVTGSLHLGHALTVAIEDALVRW
HRMRGDTVLWVPGSDHAGIATQAVVERKIWKERGARRQDLTRGEFFSEVWKWKEEKGNEI
FQQLKALGASLDWDRACFTMDSGFSEAVTEAFVRLHEDGLVYRAQRVVNWSCALRSVISD
IEVENRQLQGHTMLSVPGCPAPVPFGVMVTFAYKVEGEEDQELTVATTRPETMLGDVAVA
VHPNDPRYLHLHGKMVQHPFTGRLLPIIVDPMVEQDMETGAMKVTPAHSRADYELGKVHG
LPLISVIGEDGSMTAECGDWLQGLNRFLARDKVVSALKEKGLLRSMKGHAMVLPLCSRSG
DVVEYLLKSQWFLRCEGMAQRALDAVALGHLKFTPKFHEKNWSTWLSNISDWCISRQLWW
GHQIPAYQVPVTQSRGLEKDENGVLWVVGRTEAEARKKAAGILRKPEEEVELVRDPDVLD
TWFSSALFPFAALGWPHQTSDLQNFYPNSLLETGSDLLFFWVARMVMLGQQLTGKLPFSQ
VFLHSIVHDAHGRKMSKSLGNVIDPLDFIHGATLQDLQGRLHGGHLDPLEAAIAAEGQKR
DFPQGIPECGTDALRFSLCSHNVQGDDINLDVDAVLSSRLFCNKVWNAVKFTLKALGEGF
TPQAHSQVFPCSLMEQWILSHLYNTVAYCDQWFGEYEFHCIISAIHSFWLNKFCSVYLES
VKPVLSSGDQFQILQTCQTLLTCTDLGLRLLSPFMPYLTEELWQRLPKPDTGSFPSVCVA
SYPCADQLAHWHNPEEEANFLLVEKVIQTVRNLKMTYQLINLRLPVFLLCLNPASRVVYE
EYRDPLQTLSQAGSLKLLSCPSEVQPLTGWVGSRVNDHTEVYLEVKGLVDPKVKLTQLAS
QKQKLEHKLSKLMAQTQTQASNYQEKASQATQAENWMKISNLQRKLANLDEAMDRLHCLA
VIQGTHPLTTDK
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgaaaagggatggatccatcaggagtcggtgtctgagctccctccaccagctg
cttcagctttggaccagacctgggccctgggccatcccacccggatggagagcttcatcc
gattccaggatctcagcacagaactggacccagctgaaaaacaaggcagagaagcagaag
aggcagcacaagagactggagtccattgaggctggagtggcccagaagtcagcggtgcct
cagaggcggtctaaggcatgggtaccaaaagatgtggttttgtatgacatccccactgcg
cctggtcagaaaaaagatacatcagtgcccctgccagcatcctacagtccccgctatgta
gaagctgcatggtattcatggtgggagaaggaaggcttcttcaaaccagagtatcagagc
cagcagcctcagaggaaagcagagaccttttccctctgcatccccccacctaatgtcact
gggtccctgcacctgggtcatgccctcactgtcgccattgaggacgcattggtacggtgg
cataggatgcgtggtgatacagtgctgtgggtgccaggatcagatcatgctggaatcgcc
actcaggcggtggtagagcgcaagatctggaaagagcggggagcccggcggcaggacttg
acacgaggggagttcttctctgaggtctggaagtggaaagaggagaaaggaaatgagatt
ttccagcagctcaaggctctgggggcatctctggactgggaccgagcttgcttcactatg
gattctgggttctcagaggcggtgacagaggcatttgtgcgattgcatgaggacggactg
gtgtatcgagcacagcgcgtggtgaactggtcatgtgccttgcgctcagtcatctctgac
atagaggtggaaaaccggcagctccaaggccacacaatgctgtctgtgccaggctgtcca
gccccagtgccctttggggtcatggtcacctttgcctacaaagtggaaggagaggaggac
caggagcttaccgttgccacaacccgtccagagactatgctaggggacgtggcagtagct
gtccatcctaatgacccacggtacttgcatctccatgggaaaatggttcagcacccattc
actgggcgcctcttgcccatcattgtagaccccatggtagagcaagacatggagacaggg
gctatgaaggtgaccccagcccacagccgtgctgactatgagctgggcaaggtgcatggg
ctgcccctcatctctgtgatcggggaggacggctccatgacagctgagtgtggggactgg
ctacaggggctgaatcgctttctggcccgtgacaaagtagtgtctgccttgaaggagaaa
ggcctgctccggagcatgaagggccatgccatggtgctgcccctctgtagtcgctccggg
gatgtggtcgagtacctgttgaagagccagtggtttctgcggtgtgagggtatggcccag
agggccctagatgctgtggcattagggcatctgaaattcaccccaaaatttcacgagaag
aactggagcacttggctttccaacatcagtgattggtgtatttcccgacagctgtggtgg
ggccatcaaattccagcctaccaggtgcccgttacacagtcacgtggcttggagaaggat
gagaatggtgtgttgtgggtagtgggcaggacagaggcagaagcccgcaagaaagcagca
gggattctgaggaaaccagaagaggaagtggagttggtgagagatcccgacgtgctggac
acctggttctcttctgcactcttcccttttgcggcactaggctggccccaccagaccagc
gacctccagaacttctatcccaacagcctcctggagacggggagtgacctgcttttcttc
tgggtggctcggatggtgatgctggggcagcaactcacgggaaagctgccgttctctcag
gttttcctccactccattgtccatgatgcacatgggaggaagatgagtaaatcactgggg
aacgtgattgaccccctggatttcattcatggggccacgctgcaggacctgcaggggagg
ctacacggtgggcatctggatcccctggaagctgccattgctgcagagggacagaagcga
gattttccgcagggcatccccgaatgtggcaccgacgcactcaggttttcactgtgctcc
cacaatgtccaaggggatgacattaacctggatgtggatgcggtgctgagctcccgtctc
ttctgcaacaaggtgtggaatgctgtcaaattcacgctgaaggccctaggagaggggttt
accccgcaggcccacagtcaggtcttcccctgctccctgatggagcagtggatactgagc
catctctacaacacggttgcatactgtgaccagtggtttggcgagtacgagttccattgc
atcatctctgctatccacagcttctggttgaacaaattctgcagcgtgtacctggagtca
gtgaagcctgtgctgagtagtggagaccagtttcagatcctgcagacctgccagactctc
ctcacctgtactgaccttggcctgcgccttctctcacccttcatgccctatctgacggag
gaactgtggcaacgactccctaagccggatacaggctcctttcccagtgtctgtgtagcc
agctacccctgtgctgaccagctggctcattggcataaccctgaggaagaggccaatttc
ctgttggtggaaaaagtcatccagacagtgcgtaacctgaagatgacctaccagctgata
aatctacggctgcctgtgttcctcctgtgcctgaacccagcttcccgtgtggtgtatgag
gagtatcgggaccctttgcagaccttatcccaggctggttcgctgaagcttctctcatgc
ccttcagaagtacagcctctcacaggctgggtagggagcagagtgaatgaccacactgag
gtctatctggaagtgaaagggctggttgaccccaaggtaaagctcacccaactggcatcc
cagaagcagaagctggaacacaagctctcaaagctcatggcacagacccagacccaggca
tccaactaccaggagaaggcttcccaggcaacgcaggcagagaattggatgaagatctcc
aatcttcagaggaagcttgcaaatctggatgaggccatggaccgcttacactgcttggct
gtcatacaaggaacccatcctttgaccactgacaaatga
DBGET
integrated database retrieval system
