Alligator mississippiensis (American alligator): 102574643
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Entry
102574643 CDS
T03087
Symbol
SNX13
Name
(RefSeq) sorting nexin 13
KO
K17925
sorting nexin-13
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amj04990
]
102574643 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
amj04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
102574643 (SNX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
COX5A
Rep3_C
DUF6395
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
102574643
NCBI-ProteinID:
XP_019353459
LinkDB
All DBs
Position
Un
AA seq
980 aa
AA seq
DB search
MRVIFHKKCIKDETRLPRISPSKVPGQTRLSIWGWGSLSVVLFLGTFGPFAIFYFAFYIL
CFVGGGFVVTLLFGKTNSEKHLEQCEHSFLPSTSVGISKCIEEMKCESRPIKIDRRLTGA
NIIDEPLQQVIQFSLRDYVQYWYYTLSDNESFLLEIRQALQNALIQFSTRSKEINWQSYF
TTRLVDDFGTHLRVFRKAQQRIMEKDDQMKDTAEELVDMFFEVEVEMEKDVCRDLVCSSP
KDEEGFLRDVCEVLLYILLPPGDFQNKIMRYFVREILARGILLPLINQLSDPDYINQYVI
WMIRDSNCNYEAFMNIIKLSDNIGELEAVKDKAGEELQYLRSLDTAGDDINTIKNQINSL
LYVVKVCDSRIQRLQSGKEIDTVKLAANFGKLCTVPLDYILVDNVALQFFMDYMQQTGGQ
AHLFFWMTVEGYRVTAQQQLEVLQSRQKDGKHQTNQTKGLLRAAAFGIYEQYLSEKASPR
VNIDDCLVAKLAETLNHEDPTPEIFDDIQRKVYDLMLRDEKFYPSFKQNALYVRMLAELD
MLKDPSFRGSDEGEGESFNGSPTGSINLSLDDLSTLSSEELVQLHAHISDTGVCNDHGKT
YALYAITVHRRLPNSEETWKTYRRYSDFHDFHMRITEQFENLASILKLPGKRTFNNMDKE
FLEKRKKDLNAYLQLLLNPEMMKASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLR
NSMRNMSNAVKSLPDSLAEGVTKMSDNMGRMSERLGQDLKQSFFKVPPLFQKPDSDSEHC
RVGAQLDDNVDDNIPLRIMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINKKI
VEHVDWMTSSEQVADSVKRFRDAFWPNGILAETVPRRDKAIRMRTRVAGKTKLLEVMPDE
LKHIIGAETTRKGILRVFEMFQHTQLNKRMVYVFLEGFLETLFPQYKIRELFNKLHSHSK
QMEKYKQRLQFPQAPSLQKR
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgatttttcataagaagtgtataaaggatgaaaccaggcttcccagaatctct
ccctctaaagttcctggacagaccaggctttccatatggggatggggaagccttagtgtt
gtgctttttctaggcacatttggaccctttgctatattttacttcgcattttatatcctc
tgctttgtgggtgggggttttgtggttactctcttatttggaaaaacaaattcggaaaaa
caccttgaacagtgtgaacactcttttcttccttctacatctgttgggatttcaaagtgc
atagaagaaatgaaatgtgaatccaggcctattaagattgacagaagactgacgggtgcc
aatataattgacgaacctttgcagcaagtaatccaattttccctgagggactatgtccag
tattggtattatacattaagtgataatgaatcctttcttcttgaaatcaggcaggcactt
caaaatgcactcattcagttttctactaggtcaaaagaaataaactggcagagttatttc
actacacggctagttgatgattttggcactcatctgcgagtattcagaaaagctcagcaa
agaataatggaaaaagatgatcagatgaaagatacagcagaagaacttgtagatatgttc
tttgaggttgaagttgaaatggaaaaggatgtctgtcgtgacttagtctgcagttctccc
aaagatgaagaaggttttctaagggatgtgtgtgaggttttactgtatatattgctacct
cctggagacttccagaacaagatcatgcgatactttgtcagggaaatcctcgcccgagga
attcttcttccattaataaaccagctcagtgatcctgattatattaatcagtatgtcata
tggatgattcgtgattccaattgcaactatgaggcctttatgaacattattaaattaagt
gataatataggggagttggaagcagtcaaagataaggcaggagaagaactgcagtatctg
cgatccttggatacagcaggagatgatatcaacactataaaaaatcaaataaacagctta
ctatatgttgttaaagtatgtgattcaagaatacagaggttgcagtcaggaaaagaaata
gatactgtgaaactggcagcaaactttggaaaactttgcacagtccctttggactacatt
ctggtagacaatgttgcactacaattttttatggattacatgcagcagactggaggccaa
gcacatcttttcttttggatgacggtggaagggtacagggttacagcccagcagcagctg
gaggtgttgcaaagccggcagaaagatgggaagcatcagactaatcaaaccaagggtctg
ttaagagcagctgcatttgggatctatgagcaatacttatcggagaaggcctctccaaga
gttaatattgatgactgcttagtagcaaaattggcagaaacactgaaccatgaggaccca
acacctgaaatctttgatgacattcagagaaaggtatatgacctgatgctgcgggatgaa
aaattctacccttcattcaaacagaatgcgttatatgtgcgcatgctagctgaactggat
atgctgaaggatcctagtttcagaggatcagatgagggtgaaggagaatcatttaatggg
tctccaacaggcagcataaacttgtccttagatgatctttcaactctctcttctgaagag
ttagtacaactacatgcacacatctctgatactggagtatgtaatgaccatggaaagaca
tatgcactgtatgccatcactgtacatcggcgacttccaaacagtgaagagacatggaaa
acttaccgtcgctacagtgactttcatgacttccacatgaggatcaccgaacagtttgaa
aaccttgcaagtatactgaaactgcctggcaaaaggacttttaacaacatggacaaagaa
ttcttagaaaaaaggaaaaaagatctaaatgcatatttgcagctgctgttaaatcctgaa
atgatgaaagcttctccagctctggctcattacgtatatgacttcctggagaataaagcc
tacagcaaaggaaaaggagattttgctcggaagatggacacattcgtaaacccactgcgt
aactctatgagaaatatgtcaaatgctgtcaagtcgctccccgatagcctggcagaggga
gtgactaaaatgtcggacaacatgggcaggatgtcagaaaggttgggacaagacttaaag
caatcttttttcaaggtgcctcctttatttcagaaacctgattcggattcggaacactgc
cgggttggtgcacaacttgatgataatgtggatgacaatattcctctaagaataatgttg
ctgcttatggatgaagtctttgacttaaaggagagaaatcagtggttaagaagaaatatt
aaaaacctacttcagcagctgattagagcaacatatggagacacaatcaataaaaaaata
gttgaacatgttgactggatgacctcttctgagcaagtagcagattcagttaagcgcttc
agagatgccttttggcccaatggcattttagcagaaactgttccacgcagagataaagct
attagaatgcgaacaagagtagcagggaaaactaaactactggaagtaatgccagatgaa
ctgaagcacatcataggtgctgagacaacacggaaaggcatactccgagtctttgaaatg
tttcagcacacccaactaaataagagaatggtatatgtgtttctagagggcttcctagaa
accttatttccacaatataaaatccgtgagctcttcaataaactgcattcacactcaaag
cagatggagaaatacaagcagagactacagtttcctcaagcgccttccttacagaaaagg
tga
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