Alligator mississippiensis (American alligator): 102574662
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Entry
102574662 CDS
T03087
Symbol
VPS45
Name
(RefSeq) vacuolar protein sorting 45 homolog
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102574662 (VPS45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102574662 (VPS45)
Membrane trafficking [BR:
amj04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
102574662 (VPS45)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
B12-binding
Motif
Other DBs
NCBI-GeneID:
102574662
NCBI-ProteinID:
XP_006263200
LinkDB
All DBs
Position
Un
AA seq
570 aa
AA seq
DB search
MNVVFAVKQYVSKMIEDSGPGMKVLLMDKETTSIVSMVYTQSEILQKEVYLFERIDSSNR
ETMKHLKAICFLRPTKENVEYLIQELRRPKYSIYFVYFSNVICKSDVKSLAEADEQEVVA
EVQEFYGDYIAVNPHVFSLNLLGCCQGRNWDAAQLSRTTQGLTALLLSLKKCPMIRYQLS
SESAKRLAECVKQVITKEYELFDFRRTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKKKPK
EQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERNLLEVSEVEQELACQ
NDHSSALQNMRRLLQNPKVTEFDAARLVMLYALHYERHSSNSLPGLMMDLKNKGVSEKYR
KLVSAVVEYGGKRVRGSDLFSPKDAVSITKQFLKGLKGVENVYTQHQPLLHETLDQLIKG
KLKDNQYPYLGPSTLRDRPQDIIVFVIGGATYEEALTVYNLNRTNPGVRIVLGGTTVHNT
KSFLEEVLASGFRGRSGESSHVTPRSSSRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggtgtttgcagtgaagcagtatgtgtccaagatgatcgaggacagcgggccg
gggatgaaggtcctcttgatggataaagaaacgaccagtattgtaagcatggtgtacacc
cagtcagagatcctgcagaaagaagtttacctctttgagcgcattgattcttcgaacaga
gagaccatgaaacacttgaaagcaatctgtttcttacgacccacgaaggagaatgtggaa
tacctcattcaagagctgcggagaccaaaatacagcatctattttgtttatttcagtaat
gtgatttgtaagagcgatgtcaagtcactggccgaggctgatgaacaggaagttgtggca
gaagttcaggagttctatggagactatattgcagtgaatccacatgtcttttccctcaac
ctcttaggctgctgtcagggtcgcaactgggatgcagcccagctatccagaaccactcaa
gggctgacagctttgcttttgtctttgaagaaatgccccatgatacgttaccagctttcc
tctgaatcggcaaagaggcttgctgaatgtgttaagcaagtaattactaaagaatatgag
ctgtttgatttccggcgcacagaagttcctccattactcctgattctggaccggtcagat
gatgctatcaccccacttctgaaccagtggacctaccaagctatggttcatgagctgctg
gggattaacaacaaccgtatcgatctgtctcgagtacctggaataagcaaggatctgagg
gaggtagttctgtctgcggagaacgatgagttttatgccaataacatgtatctgaacttt
gccgagattggcagcaatatcaagaacctcatggaggatttccaaaagaagaaacccaag
gagcagcagaagcttgagtccatagcagacatgaaggcctttgtggagaactacccgcag
ttcaagaagatgtcaggcacagtatcgaagcatgtgacagtggtgggcgagctctccagg
ctggtcagcgagcggaacctgctggaggtgtcagaagttgagcaggagctagcttgtcag
aatgaccactcgagcgcactccagaacatgcggcggctcctgcagaatccgaaggtgacg
gagtttgatgccgcccgcctggtgatgctttacgctctgcactatgagcgccacagcagc
aacagcctgcctgggctgatgatggacctcaagaacaaaggagtttcagagaagtatcgg
aagctagtgtctgcagttgtggaatatggtgggaagcgcgtccgaggcagtgatcttttc
agccccaaggatgctgtgtccatcactaaacaattcctcaaaggactgaagggagttgag
aatgtgtacactcagcatcagcccctccttcatgagacgctggatcagctcatcaaagga
aaactcaaggacaaccagtacccctacctgggccctagcacactccgtgacaggcctcaa
gatattattgtgtttgtaattggaggagcaacctatgaagaagccctaactgtctacaac
ctcaaccgcaccaatccgggtgtccgcattgtgctgggtgggaccacagtccacaacaca
aaaagcttcctcgaggaagttttggcttctgggttccgtggccggagcggcgagagttct
catgttacgccgaggtcaagcagcagacggtga
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