Alligator mississippiensis (American alligator): 102575003
Help
Entry
102575003 CDS
T03087
Symbol
IRX5
Name
(RefSeq) iroquois homeobox 5
KO
K24889
iroquois-class homeodomain protein IRX
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102575003 (IRX5)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
102575003 (IRX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
102575003
NCBI-ProteinID:
XP_006273081
LinkDB
All DBs
Position
Un
AA seq
475 aa
AA seq
DB search
MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFTAPSPG
YNSHLQYGADPAAAAAAAFTSYVGSPYDHTPGMAGSLGYHPYAAPLGSYPYGDPAYRKNA
TRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWT
PRNRSEDEEEEENIDLEKNDEDEPQKLEEKGEPEAPETGAEPKAAAGCERLHEPPSPAGK
EAEGGLSDSDCKEPAEEGPPGGAPKAAAPSPLGPCAAGRMLQQAAAAEELQHHAPYRPPA
AAELHPLLPSATGTGTGTSVIHSPQQAALAKPKLWSLAEIATSADKSKEAGGGEGSPGAG
QAQGPPLAGGGASRSPARSPPAQCPFPSSAVLSRPLYYTAPFYPGYTNYGTFGALHSHPG
SNAAAAPGTHFNGLNQTVLNRAETLAKETKMLRSQSQVDLCKDSPYELKKGMSNI
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcctcagggttacttgtaccagccgtcggcttccttggctctctactcttgc
ccggcttacagcaccagcgtcatctccggccccaggaccgatgaacttgggagatcttcc
tctggctccgctttttcgccttatgccggatctacagcctttaccgccccttctccgggt
tacaactcccacctccagtacggcgcggacccggctgcagctgctgccgctgccttcact
tcgtacgtgggctctccctacgaccacacgccgggcatggcgggctccctgggctaccat
ccctacgcggcccccctgggctcctacccctacggggaccccgcgtaccgcaagaacgcc
acccgcgacgccaccgccacgctcaaggcctggctgaacgagcaccgcaagaacccctac
cccaccaagggcgagaagatcatgctggccatcatcaccaagatgaccctcacgcaggtc
tctacctggttcgccaacgcccggaggcggctcaaaaaggagaataaaatgacctggacc
ccccggaaccggagcgaggacgaggaggaggaggagaacatcgacctggagaaaaacgac
gaggatgagccccagaagctggaggagaagggggagcccgaggccccggaaacaggagcg
gagccgaaggcggcggcgggctgcgagcggctgcatgagccgcccagcccggcgggcaag
gaggccgagggcggcctgagcgactcggactgcaaggagccggccgaagaggggccgccc
ggcggggcccccaaagcggccgccccctcgccgctggggccgtgcgcggccgggcggatg
ctgcagcaggcggcggccgccgaggagctccagcaccacgccccgtaccggcccccggcg
gcggcggagctgcaccccctgctgccctcggccacgggcacgggcaccggcacgtcggtc
atccactcgccgcagcaggcggcgctggccaaacccaagctgtggtccctggccgagatc
gccacgtccgcggacaagtcgaaagaggccggcggcggcgaggggtccccgggcgcgggg
caggcgcagggccctcccctggcgggcggcggcgcctcgcggtcccccgcgcgctcgccg
cccgcgcagtgccccttccccagcagcgccgtgctctcgcggcccctctactacacggcc
cccttctacccgggctacacgaactacggcactttcggggccctccacagccaccccggg
agcaacgcggcggcggcccccggcacgcatttcaatggattaaaccagactgtcttaaac
cgagcagagaccttggctaaagaaactaaaatgctcaggagccagtcccaagtagatctt
tgcaaagactcgccctatgagctgaagaaaggtatgtccaacatttaa
DBGET
integrated database retrieval system
