Alligator mississippiensis (American alligator): 102575041
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Entry
102575041 CDS
T03087
Symbol
PRDM1
Name
(RefSeq) PR/SET domain 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102575041 (PRDM1)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102575041 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-met
B129_C2H2-zf
CapR
Motif
Other DBs
NCBI-GeneID:
102575041
NCBI-ProteinID:
XP_006260422
LinkDB
All DBs
Position
Un
AA seq
813 aa
AA seq
DB search
MEAATQCSSDSVSFKLLVKGTDWTMKMDMEDADMTLWTEADFEEKCTYIVNDHPWDPSTD
GGNVTQAEASLPRNLTFKYASNCKEVTGVISKEYIPKGTRFGPLVGEIYTTDTVPKNANR
KYFWRIYSSGELHHFIDGFNEDKSNWMRYVNPGHSVQEQNLAACQNGMNIYFYTIKPIPA
NQELLVWYCRDFAERLHYPSSGELTMMNLTQGHNNPKQQSTDKDELYQKSIPKKEHSVKE
ILKTESNPSKGKDLFQTNISPVTPEKNLDDLRKNCSPERCFFPRVIYPIRPHMPEDYLKA
SLAYGMERPNYITQSPIQSSTTPSPSARSSPDQSLKSSSPHSSPGVTVSPLAPTSQEHRE
SYPYLNGPYGSEGLGSYPGYAPPSHLSPAFLSSYNSHYPKFLLPPYGMSCNNLSALNNIN
GINNFNLFPRIYPLYGNILGGGSLSHHVLNPAALPGSLPSEGSRRLLQPDHPRDFLIPAP
NSAFSITGAAASMKDKPCSPTSGSPQAGTAATSEHIMQPKPTSAVLAATSSEEAMNLIKS
KRNVTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPFKCQTCNKGF
TQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLCPAKFTQFV
HLKLHKRLHTRERPHKCVHCHKSYIHLCSLKVHLKGNCPVAPASGLSVEDLNRINEEIEK
FDISDNADKLEDMEDNIDMTSVVEKEILTMLRREIEGANLKVSLQRNLGNGLISSGCNLY
ESSDMSIMKLPHGHPLPLLPIKVKQETIEPMDP
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgccacacagtgtagctcggactctgtgagtttcaaactgcttgtaaaaggg
acagactggacaatgaaaatggacatggaggatgctgacatgactttgtggacagaggct
gattttgaagagaagtgcacgtacatcgtaaatgatcacccatgggatcctagcactgat
ggaggcaacgtaactcaggcagaggcttccttgccaaggaacttgactttcaaatatgca
tcaaactgtaaagaggttactggagttataagcaaagagtacatcccaaaaggaacacgc
tttggacccctggtaggagagatctataccaccgatacagttcccaagaatgcaaacaga
aaatacttttggcggatctattccagtggtgagcttcaccacttcattgatggatttaat
gaggacaagagcaactggatgcgctatgtgaatccaggccattctgttcaggaacagaac
ttggctgcttgtcaaaatggaatgaacatctacttctacaccatcaagcctatccctgcc
aaccaagaactacttgtgtggtattgtcgagactttgcagagagacttcactatccttcc
tccggagagctgacgatgatgaatctcacacaaggccacaataacccaaagcagcaaagc
actgataaagatgaactttatcagaaaagcatcccaaagaaagagcacagtgtgaaagaa
atcctgaaaactgaatccaacccttcaaaaggaaaggatttattccagaccaacatttca
cccgttactccagaaaaaaacttggatgatttaagaaaaaactgtagccctgaaaggtgt
tttttcccacgggttatctatccaatccgacctcacatgccagaagactatttgaaagct
tccctagcttatgggatggaaagacccaactatattacacagtctcccatccagtcttct
accacaccaagtccttcagcaaggagcagcccagaccaaagtttaaaaagctcaagccct
cacagcagtccaggggttactgtttcacctctggcacctacttctcaagaacacagagaa
tcttacccttacttgaatggaccctatggctcagaaggattggggtcttatcctggatat
gcaccccctagccatctctctccagcctttttatcctcctataattcccactatccaaaa
ttcctgttacctccatacggtatgagctgtaataacctgagcgctttgaacaatatcaat
ggcatcaacaatttcaatctcttcccaaggatatatcctctctatggcaacatactgggt
ggaggcagcctgtcccatcatgtgctaaaccctgctgctcttccaggttcactgccatct
gaaggaagccgtagattgctacaacctgatcatccaagagactttctcataccagcacct
aacagtgccttttccatcacgggcgctgctgccagcatgaaagacaaaccatgcagcccc
acaagtgggtcccctcaagctggcacagcagctacttcagagcatataatgcaacctaaa
cctacctcagcagtgttggctgccaccagcagtgaagaagccatgaatctcattaaaagt
aagaggaacgtgactggttacaaaacccttccatatccactgaagaagcagaatgggaag
atcaaatatgaatgcaatgtttgctctaaaacctttggccagctctcaaatctgaaggtc
cacctgagagtgcacagtggtgagaggcctttcaagtgtcagacttgcaacaaagggttt
acccaactggctcacctccagaagcactatctggtgcacacaggcgagaagccccacgag
tgccaggtttgccataagcgattcagcagcaccagcaacctaaagacccatcttcggctc
cactctggagaaaagccttaccagtgcaagttgtgccctgctaaattcacccagtttgtg
catctgaagctgcacaagcgtctccacaccagggaacgtccacacaagtgtgtccactgt
cataagagctacattcacctctgcagcctcaaagtccacctgaagggcaactgcccagta
gcccctgcctccggcctctcagtggaggatctaaatcgtatcaatgaagagatcgagaag
tttgacatcagtgacaatgctgacaagctggaagatatggaggacaatatcgacatgaca
tcagttgtggaaaaagaaatattgaccatgctcagaagagaaatagaaggagctaatctt
aaagtatctttgcagaggaacctgggaaatggacttatctcctcaggatgcaacctctat
gaatcttcagatatgtccattatgaagttgcctcatggtcatccactacctctgttaccg
ataaaggtcaagcaagaaacaattgaaccaatggacccttaa
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