Alligator mississippiensis (American alligator): 102575168
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Entry
102575168 CDS
T03087
Symbol
TOP3A
Name
(RefSeq) topoisomerase (DNA) III alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03440
Homologous recombination
amj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102575168 (TOP3A)
03460 Fanconi anemia pathway
102575168 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amj03032
]
102575168 (TOP3A)
03400 DNA repair and recombination proteins [BR:
amj03400
]
102575168 (TOP3A)
Enzymes [BR:
amj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
102575168 (TOP3A)
DNA replication proteins [BR:
amj03032
]
Eukaryotic type
DNA Topoisomerases
102575168 (TOP3A)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
102575168 (TOP3A)
FA (Fanconi anemia) pathway
102575168 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Zn_ribbon_Top1
Toprim
Zn_ribbon_GRF_2
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
102575168
NCBI-ProteinID:
XP_019350103
LinkDB
All DBs
Position
Un
AA seq
937 aa
AA seq
DB search
MVMTSVSGHLLSHDFKTAFRKWHSCNPLVLFDAEIEKYCPENYVDIKRTLEREVRQCQAL
MIWTDCDREGENIGFEIIQVCKAVKPSLQVFRARFSEITPHAVRVACENLTQPDQNTSDA
VDVRQELDLRIGAAFTRFQTLRLSRIFPDVLAERLISYGSCQFPTLGFVVERFKAIQAFV
PETFYKIKVTHKREDAIVDFSWKRNRLFNHTACLVLYQMCMEDPVATVVMIGSKPKSKWR
PLPLDTVELEKLASRKLKINAKETMRVAEKLYTQGYISYPRTETNMFPKELSLSALVQQQ
TQDPHWGAFAQRILDQGGPTPRNGSKTDQAHPPIHPTKYTCNLQGNEQRLYEFIVRHFLA
CCSQDAKGQETTVEIDIANERFIAQGLMILARNYLDVYPYDKWSDKVIPVYEKGSRFQPT
TVEMVDGETSPPQLLTEADLIALMDKHGIGTDATHAEHIETIKARMYVGLTPEQRFLPGH
LGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKKDKSVVLRQQIQKYKQVFIEAVAK
ANKLDQALSQYFGTVREVAQGEELYPETPAAIRKCPRCNNDMVLKTRKNGGFYLSCVGYP
ACKTAVWFPDFVLEVSKDDSVCAVCKPHPVHRLKFKLKQGSAPPLLPLEFVGCIGGCDKL
LRDTLDLQYLQRLPQPASEAGQADNHLQVSHSLNRMASNENGHRRPAANPPIGFLGPRGT
RPPSTAARLAVAADENNAVMCNCGQAAVLLTVRKDGPNQGRQFYKCSASSCNFFLWADQQ
AEDRNSAAPGSFTSPASFERSPIGFHSPEEGRGQGHYQSSSRDAEGGGSSVCNCNQLAIT
RTVQKDGPNKGRQFHTCPKPRDQQCGFFLWADENVAPGASADISSNHFRDQGFPRGAGSK
AKRPDNFSSKGPTVKRPRTCGICHQPGHTRKTCPQNH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgacgtctgtttcaggccatttgctgagtcatgattttaagacggcatttcgc
aaatggcatagctgcaaccccctggtgctctttgatgctgagattgagaaatactgccct
gaaaactacgtggatattaagcggaccctagaacgagaagtccggcaatgccaggctctg
atgatctggactgattgtgatcgagaaggagagaacattggctttgagatcatccaggtc
tgcaaagctgttaagccaagtcttcaggtgttccgagcccgcttttctgagatcacacca
catgctgttcgagttgcctgtgaaaacctcacccagcctgatcagaacactagtgatgct
gtcgatgtcagacaggagctggatctcagaataggtgctgccttcaccagattccagacc
ctgaggctctccagaatcttccctgatgttctggcagagcgtttaatcagctatggtagc
tgccagttcccaactctgggatttgtggtagaaaggtttaaagccatacaggcttttgtt
cctgaaaccttctataaaataaaagtgactcacaaacgtgaggatgccattgtggacttc
agctggaagaggaatcgactctttaaccacacagcatgccttgtcctctaccagatgtgt
atggaggatccagtagccactgtcgtcatgattggtagcaaaccaaaaagcaagtggagg
cccctgcctctggacacagtggaactggagaagctggcatcccgcaaactgaaaataaat
gccaaagagaccatgagagtggcagaaaagctctatactcaagggtacataagctacccc
cgaactgagaccaacatgttccccaaagaattaagcctgtctgcactggtacagcagcag
acccaagatccacactggggagcttttgcacaaaggattctagaccagggtgggccaaca
cctaggaacggttccaaaaccgatcaggctcacccccccattcaccccaccaaatacacc
tgtaacctgcaggggaacgagcagagactgtatgaattcatcgtacgtcatttcttggct
tgctgctctcaagatgccaaaggacaggaaaccactgtggagattgatattgccaatgag
cggtttattgctcaagggctaatgatccttgccagaaactacctggatgtgtacccatac
gacaagtggagtgacaaggtcatcccagtgtatgagaaagggtctcgttttcaacctacc
acggtggagatggtggatggggagaccagcccgccccagctcctcacagaagctgatctc
attgcactcatggataaacatggcattgggactgacgccacgcatgccgagcacattgag
accatcaaggcacgaatgtatgtggggctcactccagagcagaggttccttccaggccat
ctgggcatgggactggtagaaggttacgattctatgggctacgagatgtcaaagcctgac
cttcgagctgagttggaggctgacctgaaactgatctgtgaggggaagaaagacaagtct
gtagtgctgaggcagcagatacagaagtacaagcaagttttcattgaagcagtggccaaa
gccaacaagctggaccaggctttgtctcagtactttggaacagtcagagaagtggctcaa
ggagaggagctctaccccgaaacaccagctgccatccggaaatgtcctcggtgcaacaat
gacatggtcctgaagactaggaagaatggcgggttttaccttagctgcgtgggatatcct
gcttgcaaaactgctgtctggtttcctgactttgtgctggaagtcagcaaggacgacagc
gtctgtgctgtgtgcaagccccatccagttcacaggctgaaatttaagctcaagcaaggg
agtgcccctcctctcctgcccctggaatttgttggctgcatcggaggctgcgacaagttg
ctgagagacaccttggacctgcagtatttacaaagattgccccaacctgcatcagaagct
ggccaggcagacaaccacctgcaagtcagccactcccttaaccgaatggctagcaatgag
aatggccacaggaggccagccgcgaacccgccaattggattcctaggacccaggggcacg
aggccgcccagcactgctgctcgcctggctgtagctgctgacgagaacaatgcagtgatg
tgcaactgcgggcaggcggcagtgctgctcactgtgcggaaggacgggcccaaccaaggc
aggcagttctacaagtgcagtgctagcagctgcaacttcttcctgtgggcggatcagcag
gccgaggacaggaacagtgcagcacctgggagctttacatcgccagcttcctttgaaagg
tcccctataggcttccacagcccggaagaagggagaggccagggacactaccagagcagc
agtcgagatgctgaaggagggggcagcagcgtttgcaactgcaaccagctggctatcaca
cgcacggtccagaaggatggacccaacaaagggcggcagttccacacttgcccaaagccc
cgggaccagcagtgcggcttctttctgtgggcagacgagaatgtggccccaggggcatct
gcggacatctcttcaaaccattttagggaccaggggttcccaagaggagcaggaagcaaa
gctaaaaggccagataatttctcctcgaaggggccaaccgtgaagagaccacggacctgt
gggatttgccaccagcctggtcacaccaggaagacttgtccccagaaccactga
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