Alligator mississippiensis (American alligator): 102575258
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Entry
102575258 CDS
T03087
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
amj04054
]
102575258
Pattern recognition receptors [BR:
amj04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
102575258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
LRR_14
TIR_2
LRR_9
DHU1_N
Motif
Other DBs
NCBI-GeneID:
102575258
NCBI-ProteinID:
XP_006277715
LinkDB
All DBs
Position
Un
AA seq
997 aa
AA seq
DB search
MCACLHAVGDCTHSKGCVHTYANSRGCAYTHMSTHTKAHASIDPAMIPPYCHPFPIARWL
FLAACVQGAGAYGFAHCSLSFEQPDYASCMGRGIVQLSQAIASLPNTTKWINASQNALQV
LNFSTFTHLPHLQELRLDQNQLDTLHPGAFQGLAELKRLDLSQNRLVSLEPAVLAGLTAL
QVLHLGHNTLATLHPESLALLGSLQELHLAYNQLSQLQDVAMAMQGLANLSLLDLDSNQI
SSPCRNSSPVSLPFLKSLNLRSNNIVSLDLTHCSLPSLQKLNLTRNNMTQLVASSFYTAP
SLEELTVDENHLNISQLLGLSLPNLTALHFSSMRPALESDVGMACQVLQGLPALKVLDIK
HSKILSSQVAWLGSCTNLTQLDLATTPLSHKDKINFHTFHSLEFLSLDKCKIQQFSGSQW
GEGLAQLHTLILRRNLLTKLVNGLFKALPNLTFLDLSRNRLTYVYKKNFLGMASLRTLLL
QGCQLASVTRNTFVYARKMVFLDLRDNSLLYLKTYAFQPLNHLQTLLLSSNRILTIQKQA
FTGLTSLRQLSLAHNYLYKVSKGSFLGLKALEVLDLSHNRLFSYNKQDLSAPFTYLLSLR
TLDLSSQDPKPPIELPVNFFQGLPKLQNLSLRENPSSAFFNLSLAPLAGLQFLDLSDIYP
KRGDPFCLHSELFQGLGHLRWLRMDGSSLRDLPLDIFSGMESLEGLSVRENKLRNLSQAL
LGNLTMLRYLDVFNNPLACSCENAWFQNWSVSDPDVQIPLLGSYTCLGPGLSEMGFEKMD
LTFCRVDIAIFFFLVAFFATLLTMLGSVAKAKMGWTLRHSFYLVWAWGRGRLQRHRQAYQ
YDAYISCCTQDEPWVVEKLLVELEEGQPQYQLCFGPRDFAPGAYYLDNVQNGISSSRKTL
CMVSRNYLESEWCSLEMQLACSRTYYQGHDPLVVVFLEEIPNYRLTPYHRLRKLLKQNSY
LHWPEEPNAEDMFWTQLREALDAGGSTNKLHQFNVIE
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcatgtctacacgcagtaggagattgcacacatagcaaaggatgtgtgcacaca
tatgccaacagtaggggttgtgcatatacacacatgtccacacacacaaaggcacacgca
tccattgaccccgctatgatccctccttactgtcatccctttcccattgcccgatggctc
ttcctggctgcctgtgtccagggcgctggggcctatggctttgcccactgttccctgtca
tttgaacagccagactatgccagttgcatggggcgtggtatcgtccagctgagccaggcc
attgcttccctgcccaacaccaccaagtggatcaatgcctcccagaatgccctgcaagtg
ctgaactttagcaccttcacccaccttccccacctccaggagctgcggttggaccagaac
cagctggacaccctccaccctggcgccttccaggggctggcggagctgaagcgactggac
ctcagtcagaaccggttggtgtctctggagcctgcagtgctggcagggctcactgctctg
caggtactgcacctgggacacaatacccttgccacccttcatcctgagagtctggccttg
ctgggtagcctccaggagctccacttggcctacaaccagctctctcagctccaggacgtg
gccatggccatgcaggggttggccaacctgtccctccttgatttggattccaatcagatc
tcctcaccatgccggaactccagcccagtctccttgcccttcctgaagagcctgaaccta
aggagcaataacattgtctctctggacctcacccactgctctctgcccagcctgcagaaa
ctcaatctcacccgcaacaacatgactcagctggtggccagctccttctacactgcacca
agcctggaggagctgactgtggatgagaaccacctgaacatctcccaactcctggggctg
tctttgcccaacctcacagccctgcacttctccagcatgcgcccggcactggagtctgat
gtggggatggcttgccaggtcttacagggcctcccagcactgaaggtcctggatatcaag
cactccaagatcctctcctcacaagttgcctggctgggctcatgtactaacctgacccag
ttggatctagccaccacccctttgagccacaaggacaaaattaacttccatacctttcac
agcctggagttcctctcgctggacaagtgcaagatccagcagttcagtggtagccagtgg
ggggagggcctggctcagctccacacactgattctgcggcgtaacctcctcaccaagctg
gtgaacggccttttcaaggccctgcccaatctgaccttcctggacctatcccggaaccgc
ctgacctacgtctacaagaaaaatttcctgggcatggcctccctgaggaccctgcttctc
caaggctgccagctggcctcagtcacccgcaacacctttgtctatgcccgtaagatggtg
ttcctggacctgagagacaacagtctcctctacctgaagacctatgccttccagcccctc
aaccaccttcagaccctactgctgtctagcaacaggatcctcaccattcagaaacaggcc
tttacaggcctcacctcccttcggcaactctccctggcccataattacctctacaaggtc
tccaagggctccttccttggtctcaaggccctggaggtgctggacctcagtcacaaccgt
ctgttctcttataacaagcaagacttgtctgcccccttcacctatctcctcagcctccgt
acccttgacctcagctcccaggatcccaagcctcccattgagctcccagtcaacttcttc
caaggcctccctaagctccagaacctcagcttgagggaaaaccccagctccgccttcttc
aacctctctttggcccctctggctggactccaattcctggatctctctgacatctatcct
aaaaggggagatcccttctgcctccactcagagctgttccaggggctgggccacctgcga
tggctcaggatggatggcagttccctcagagacctgcccttggacatcttctctggcatg
gagtctctggaggggctgtcagtacgggaaaacaagctgaggaacctcagccaggccctg
ctgggtaacttgactatgttgcggtacctggacgtcttcaacaaccccttggcctgctcc
tgtgagaacgcctggttccagaactggtctgtcagtgaccctgatgtccaaattcccttg
cttggttcctacacctgcttgggcccagggctgagtgagatgggctttgagaagatggat
ctgaccttctgtagggtggacatagccatcttcttcttcctggtagccttttttgccacc
cttctgacgatgctgggctctgtggcaaaggccaagatgggctggacactgaggcacagc
ttctacctggtctgggcctggggcaggggccggctgcagaggcaccgccaggcctaccag
tatgatgcctatatctcatgctgcacccaggatgaaccatgggtggtggagaagctgctg
gtggagctggaggagggacagccccagtaccagctgtgctttgggcccagggactttgca
ccgggtgcctactacctggacaatgtccagaatggtatcagcagcagccgcaagacgctg
tgcatggtgagcaggaactacttggagagtgaatggtgctccctggagatgcagttagcc
tgctcccggacctactaccaggggcacgaccccctggttgtggtcttcttggaggagatc
cccaactacaggctcaccccctaccatcgcctgaggaagctgttgaagcagaacagctac
ctgcactggccggaggaacctaatgctgaagatatgttctggacccagctgcgggaggcc
ttggatgctggtggcagcaccaataagctccatcagttcaatgtgatagagtag
DBGET
integrated database retrieval system
