Alligator mississippiensis (American alligator): 102575338
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Entry
102575338 CDS
T03087
Symbol
PDGFRA
Name
(RefSeq) platelet derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04010
MAPK signaling pathway
amj04020
Calcium signaling pathway
amj04144
Endocytosis
amj04510
Focal adhesion
amj04540
Gap junction
amj04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102575338 (PDGFRA)
04020 Calcium signaling pathway
102575338 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102575338 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
102575338 (PDGFRA)
04540 Gap junction
102575338 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
102575338 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
amj01001
]
102575338 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
amj04090
]
102575338 (PDGFRA)
Enzymes [BR:
amj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
102575338 (PDGFRA)
Protein kinases [BR:
amj01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
102575338 (PDGFRA)
CD molecules [BR:
amj04090
]
Proteins
102575338 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
V-set
Kinase-like
Motif
Other DBs
NCBI-GeneID:
102575338
NCBI-ProteinID:
XP_006276273
LinkDB
All DBs
Position
Un
AA seq
1087 aa
AA seq
DB search
MGTFPRLLLGLGCILTGPWLTFCQLPLPTIFPNKNEMVVQLNSSFTLKCSGDSEVSWQYP
MAEENQKIDIRLEENNSGLFVTVLEVGDASAALTGLYTCYYNHTQVEDGEVEGTDIYIYV
PDPDIPFVPTLQEDQFILIEEGDSTVIPCRTTDPDAQVTLINSEAKPLYAFYDSKQGFIG
NFPAGTYTCKTTVKGVEFKSDEFFIYILRATSQLPVKIEALKTVYKKGETIVVTCVVSHN
EVVNLDWNYPGKVKEKGVIKLDDIKVPHQKLVYTLTIPEASVKDTGDYECTARHATKEVK
ENRRVVITVHDKGFIHLEPQFSPLEAVNLHEVKNFVVDVHAYPTPKMFWLKDNVTLIENL
TEIVTSSNKIHETRFQSTLKLIRAKEEDSGYYTLVAENEDETKRYTFSLLIQVPALILDL
VDNHHGSAGGQTVRCLAEGTPLPDVEWLICKDIKKCSNDTSWILLTSNISDISMEAHLDE
KNMVESQVTFQKVEETLAVRCIARNDLGAVTRELKLVAPTLRSELTVAAAVLVLLVIVII
SLIVLVVIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKLKKDLDIFGMNPADESTRSY
VILSFENNGEYMDMKQADTTQYVPMLERKEGSKYSDIQRSMYDRPASYKKKSMSESEVKN
LLSDDSSEGLSLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLA
RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMM
VDSTFYNKIKSGYRMAKPDHATNEVYEIMVKCWNSEPEKRPSFYHLSEIVECLLPGEYKK
SYEKIHLDFLKSDHPAVTRMRGDCDNTYIGVTYKNEDKLKDRESGFDEQRLSADSGYIIP
LPDIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDIMDDIGIDSSD
LVEDSFL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgggtactttcccaagattactcctgggcctgggatgtatcctaacaggaccatggcta
acattttgccagcttccattgccaactatatttccaaataaaaatgaaatggttgtgcag
ttgaattcctctttcaccctgaaatgctctggggacagcgaagtgagctggcaataccct
atggctgaagaaaaccagaaaatagacattagacttgaagagaacaacagtggcctcttt
gtgactgtgcttgaagtaggagatgcctcagctgctcttactggattatacacttgttat
tacaatcatacccaagtggaggatggtgaagtagaggggacggatatttacatctatgta
cctgatccagatatcccttttgttcctacgctacaagaggatcaattcatcctaatagaa
gaaggcgattccactgttatcccttgtcgtacaactgaccctgatgctcaagtaacctta
attaacagtgaagccaagcccttatatgccttttatgatagcaagcagggcttcatagga
aattttcctgcaggcacatacacatgcaaaacaactgttaaaggagtggagttcaagtcc
gatgagttctttatatatattttgagagctacttcacagctgccagttaagattgaagcc
cttaaaactgtatataaaaaaggcgaaaccattgttgtaacatgtgtggtctctcacaat
gaggttgttaatttagattggaattatccagggaaagtgaaagaaaaaggtgtgataaaa
cttgatgacataaaagttccacaccagaagctggtttacaccttgaccattccggaggca
tcagtgaaagacactggggattatgaatgcactgccagacatgcaaccaaggaggttaag
gaaaataggagagtagtcattacagttcacgacaaaggattcattcatctggagccccag
tttagtcctttggaagctgtcaatctccatgaggtcaaaaattttgtagttgatgtgcac
gcatatccaactccaaaaatgttctggctgaaggacaatgtgaccctgattgagaatctt
accgagattgttactagttcaaataagatccatgagacaaggtttcaaagtacattaaaa
ctgattagagccaaggaagaagacagtggatattacaccttggttgctgaaaatgaagat
gagactaaaagatatactttctcattactaatacaagttccagccttaattctagacctg
gtggataatcatcatggctcagccggaggacagacagtaaggtgcttggcagaagggaca
cctcttcctgatgttgaatggctaatttgcaaggacattaaaaaatgcagcaatgatacc
tcatggatacttctgactagcaacatctcagatattagcatggaggctcatttggatgag
aagaacatggtggaaagccaggtgaccttccagaaggtagaagaaaccctggcagttcgg
tgcattgcaaggaacgaccttggtgctgttactcgggagctgaagcttgtggctcctaca
ttgcgatcagagttaactgtggctgctgcagtcctagtgttgttagtaattgtgattatc
tcactgattgtcctggtcgtcatatggaaacagaagccacgatatgagataagatggaga
gtcattgaatcaatcagtcctgacggccatgaatacatttatgtggacccaatgcaactg
ccatatgactcaagatgggagtttcctagagatggattagtccttggtcgaattcttggt
tctggtgcatttggcaaagttgttgagggaactgcatatgggttaagtcgctctcaacca
gtgatgaaggtagctgtgaaaatgctgaaacccacagcgagatccagcgaaaaacaagca
ctaatgtctgaactgaagataatgacacatcttgggccacatttgaacattgtgaatctg
ttaggagcttgtaccaaatcaggtccaatttacatcattactgaatactgcttttatgga
gatttggtaaactacttgcataagaatagagataattttctaagccgacacccagaaaag
ctgaagaaggacttggacatctttggcatgaacccagctgatgaaagcacaagaagttat
gtaattttatcctttgaaaacaatggagaatacatggacatgaaacaagctgatacgacc
cagtatgtgcccatgctggaaaggaaggagggttctaaatattctgatatccagagatct
atgtatgatcgacctgcttcatacaagaagaaatccatgtcagaatctgaagtcaagaac
ctactttctgatgacagttctgaaggcctcagcctattggacttactgagcttcacctat
caagttgcacggggaatggagttcttggcttctaaaaattgtgtgcaccgtgacttggca
gctcgtaatgtccttctagctcaaggaaaaattgtgaagatctgtgactttggtctggct
agggacatcatgcatgattccaactatgtctccaaaggcagtacatttcttccagtgaaa
tggatggcacctgagagcatttttgacaatctgtacacaacattaagtgatgtctggtct
tatggcattctactgtgggaaatattttcccttggtggcacaccttaccctggaatgatg
gttgattctactttctataacaagataaaaagtggctaccgaatggcaaagcctgaccat
gccaccaatgaggtgtatgagatcatggtgaagtgttggaacagtgaaccagaaaaaaga
ccttctttttaccatttaagtgaaattgttgagtgtctgttgcctggagagtacaaaaag
agctatgaaaagattcatctggacttcctgaaaagtgaccacccagctgtcacacgcatg
agaggggactgtgacaacacctatattggtgtcacctacaagaatgaagacaaactcaag
gatagggagagcggatttgatgagcagaggctgagtgctgacagtggatacatcatccct
ctgcctgacattgaccctgtatctgaagatgagcttggcaaaagaaacaggcacagttcc
caaacatctgaagaaagtgctattgagactggttccagcagctctacctttatcaagaga
gaggatgagaccattgaggacattgacataatggatgacattggaatagattcctcagat
ctggttgaggacagcttcctgtaa
DBGET
integrated database retrieval system
