Alligator mississippiensis (American alligator): 102575342
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Entry
102575342 CDS
T03087
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amj04040
]
102575342 (TRPA1)
Ion channels [BR:
amj04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102575342 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
DUF5685
PKD_channel
Motif
Other DBs
NCBI-GeneID:
102575342
NCBI-ProteinID:
XP_006277080
UniProt:
A0A151MN88
LinkDB
All DBs
Position
Un
AA seq
1114 aa
AA seq
DB search
MRRSLLKLFQGREKAADPDTYHGVVCEADAASVASQDVFKVISDGSTCRLRSFIKKNRSG
LSKVDELHATPLHHAAEGGQIELMQMIIDDSSYEVLNVTDSSGNTPLHWATKKNQIESVK
LLLRKGANPNILNSNMMAPLHMSVQSLQNEIVKILVQHSSTDVNLEGEAGNTPIIVACYK
DNPEALTLLIENGGKICKPNKTGCMPIHAAAFSGAKTCMEILLKKGEELGYSAKIHINFT
NNGKCSPLHLAVQSGDLEMIRMCIEVGAQIDLKQNEKCTALHFAATQGATEIVKLMMSSY
AGDESLIDAVDGNKETLLHRTALFDHYELAEYLLSMGANINSIDTEGRSPLLLATSCASW
KIVNLLLSKGANVSLKDQLGRNFLHLTVLQPGGLQHLNETFLQMKHIKELVVDEDNEGCT
PLHYACRQGVALSVNKLLNLNVSIYSKSRDKKSPLHFAASYGRINTCQRLLRDMEDTRLL
NEGDRKGMTPLHLASQNGHEKVVQLLLKKGALFLCDYKGWTALHHAAFGGFTRTMQIILD
TNAKCTDKVDEEGNTALHLAAREGHPKAVKLLLDHGAKILLNKAVASFFHEAIHSRQKDV
VSVIILNKRWEEAVTTFSHSCSANKCPLLEMVEYLPESFKLVLDNCMSESSEEKTNRDFY
IEYNFRYLQCPLTLRKPKGDEEIEYEPLTILNAMVRHNCMELLSHPVCKEYLLMKWMAYG
FRAHLMNLGVYSLGLIPLTLLVTNIKPRKTLNGSETYNSGPLVSEESYFIRVCMCLVLIM
SLLGICKEIFQLIQQKLKYLLDYSNLLDWTIYTTSIIFVSSLFATIPGHLQWECGAIAVY
LSWMNFLLYLQRFENYGIYVVMFWEILRTLIRIVVVFFFLILAFGLSFFVLLGSQKTYSS
PLLSVMKTFAMMLGDINYHDAFLGPLLSNELPYPFLSYTVLIIFTLLIPILLMNLLIGLA
VGDIAEVQKYAALKRIAMQVNLHTNLEKKLPYWFLSRVDQESITVYPNRPRYCGFMSVFQ
YCFGCEDNTTDTHSTDSTLELEVLKQKYRLKDISTLLERQHDLIKLILQKMEIVSEAEDE
DSNDLFQQNFRKQQLENRNSKWDTVLKVVKSKGA
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgctccctgctgaagctcttccagggcagggagaaggcggcggatccggacacc
taccacggcgtcgtgtgcgaagcggacgccgcctcagtcgcctcgcaggacgtcttcaag
gtgatttcagatggaagtacttgcagattacggagtttcattaagaagaatcgttctgga
cttagcaaagtggatgaactacatgccactccattgcatcatgcagcagaaggaggtcaa
attgaattgatgcagatgataatagatgattcttcatatgaagtattaaatgtgacagac
tcttctggaaataccccacttcattgggctacaaagaaaaaccagattgagagtgttaaa
ttacttcttagaaaaggagctaacccaaacatcctgaactccaatatgatggctcctcta
catatgtctgtgcagtcccttcaaaatgaaatagttaagatattggttcagcacagcagt
acagatgttaatttagaaggagaagctgggaacacccctataattgtagcatgttataaa
gataatcctgaagccctgacacttttgattgaaaatgggggaaagatatgtaaaccaaac
aaaactggatgtatgcctatccatgcagctgcattttccggtgcaaaaacatgtatggaa
atacttttaaagaaaggtgaagaattaggctattctgctaaaattcacatcaattttacc
aataatggaaagtgcagtccccttcatctggcagttcaaagtggagacttggaaatgatt
agaatgtgcattgaagtcggagcacaaattgatctaaaacagaatgaaaaatgcacagca
cttcattttgctgccactcaaggagcaactgagattgttaaattaatgatgtcctcgtat
gctggtgatgagtctcttatcgatgctgtagatgggaataaggaaacattgcttcatagg
acagcactgtttgatcattatgaactggcagaatatttgctttccatgggtgcaaatatc
aatagtattgacacagagggtcggtcaccacttctgttggctacttcttgtgcatcatgg
aaaattgttaatttactactctcaaaaggagcaaatgtatcattaaaagatcaacttggt
cggaatttcttgcatttgactgtcctgcaacctggaggactacaacatttgaatgagacc
tttctgcagatgaaacatattaaagaacttgtggtagatgaagacaatgaagggtgtact
cccctacattatgcatgtagacaaggggttgccctgtctgtaaacaaattgctgaacttg
aatgtttccatctattctaaaagtagagacaagaagtcccccctgcattttgcagctagt
tatgggcgaattaacacctgtcagagacttctaagagacatggaagacacaaggcttttg
aatgaaggtgataggaagggaatgactccccttcacctggcatcccaaaatggtcatgag
aaggttgtacagctccttctgaagaaaggagcactttttctctgtgattataaaggctgg
acagccctgcaccatgctgcctttggaggattcacacgcacaatgcagataattttagat
actaatgcgaaatgtacagacaaagtggatgaagaagggaacacagctctgcaccttgct
gcaagagaaggacatccaaaagcagtgaaactacttcttgaccatggtgccaagatactt
ttgaacaaagcagtagcttctttttttcatgaagcaatacacagtaggcaaaaagatgtt
gtatctgtgatcattttgaataaaagatgggaagaagctgtgacaacattttcgcactct
tgtagtgccaataagtgtcctttgttggagatggttgagtaccttcctgaatcatttaag
ttggttttggacaattgcatgtctgagtcttcagaagaaaagacaaaccgggacttctac
attgaatataacttcaggtatcttcagtgtcctctaactcttaggaaaccaaagggagat
gaagaaattgaatatgaaccacttaccattctaaacgccatggtacgccataactgtatg
gagcttctcagtcatcctgtatgtaaagaatatttgctcatgaagtggatggcatatggg
tttcgtgcacatcttatgaacttgggcgtatattctcttggtctcattccactcactctt
ctggtcaccaacataaagccaagaaagactttaaatggaagtgagacctataattcagga
ccattagtatctgaggaatcatactttataagagtatgtatgtgcttagtattaatcatg
agtttattgggaatatgcaaagaaatatttcagctcattcaacaaaaattgaagtattta
ttggactactccaacctgctggactggacaatttatactacaagcattatttttgtgtcg
tcactatttgctaccatccctggtcacttgcagtgggaatgtggagcaattgctgtatac
ttatcttggatgaacttcttgctttatcttcaaagatttgaaaactatggaatctatgtg
gtgatgttctgggagatactgaggactttgattcggattgttgttgtattctttttcctg
atattggcctttggactcagcttttttgttcttttgggttcacagaaaacgtatagcagt
ccactcctttctgtaatgaagacatttgctatgatgctaggagatattaattatcatgat
gctttccttggtccattgctaagtaatgaattgccttatcccttcctgagttatacagtt
cttattatctttaccctgcttattccaattctacttatgaacttgctgattggtttggct
gttggagacattgctgaggtgcagaaatacgctgcactcaaaaggatcgcaatgcaggtc
aatcttcacacaaacttagagaagaagctgccatattggttcctaagtcgggtagaccag
gaatcaatcactgtgtatccaaataggccaagatactgtgggtttatgagtgtgttccag
tattgctttggctgtgaagacaataccacagatacacacagcactgattccactttagaa
ctggaagttctaaagcagaaatacaggcttaaagatatatcaacactcttggaaaggcag
catgaccttattaagttgatcctacaaaaaatggaaatagtatcagaagctgaggatgaa
gacagtaatgatttatttcaacaaaattttaggaaacagcagttagaaaacaggaacagt
aaatgggatactgttttaaaagttgtaaaatcaaaaggagcctaa
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