Alligator mississippiensis (American alligator): 102575471
Help
Entry
102575471 CDS
T03087
Symbol
ERCC6
Name
(RefSeq) ERCC excision repair 6, chromatin remodeling factor
KO
K10841
DNA excision repair protein ERCC-6
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102575471 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102575471 (ERCC6)
03400 DNA repair and recombination proteins [BR:
amj03400
]
102575471 (ERCC6)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
102575471 (ERCC6)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
102575471 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
102575471
NCBI-ProteinID:
XP_014460561
UniProt:
A0A151MKX5
LinkDB
All DBs
Position
Un
AA seq
1491 aa
AA seq
DB search
MMPTETSHPPDSSQEEAAVAVVSDKNLNDSEETGIGQENELCDGDLEDSLGGALATENRP
STSMAPFFELSRKKQPLLHIDRQQIQCVAHGAQTAELKGLGVDVYDQDILEQGVLQQVDN
AINEANKTTKIADAEKEYQSVLDDLRSCVTSLKHINAIIEQLTPQAAKSKDINRKLDSVK
RQKYNKEQQLKKIKAKQKRLQAILGGEESFIEANNIEFEADEEPGPSSLGSMLMPAQETE
WEELIRTGHMTPFGTKVPQKPEKKPRRLVLTEASDFEKYLADQAKLSSERKRLSFKKRAK
KKAQSKNIQCAMPTLTLKGKNGKTRPLSTTDKCVKKRLKKLQNHALQIHSKSGIPKEKRP
LEAKGKMGVHDGDDSENSDYVPDEELFNPEEEEQEEEALFYADDDSDYELKTLLRQRKSL
KKDLKEEAEDDDFFPSSEEEEEENKIGKRRIKRCKDDGDEDCYKQRLRRWNKQRLKDKEE
HRMAEEDSDESDAEFEEGFRVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGK
TIQIIAFLAGLSYSKIRTRGSNYRYKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLH
ETGSYTNKKVKLIHEIAGCHGILITSYSYIRLMQDNIHSYDWHYIILDEGHKIRNPNAAI
TLACKQFRTPHRIILSGSPVQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSN
ASPVQVKTAYKCACVLRDTINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTAEQRQVYQK
FIDSKEVYQILNGEMQIFSGLVGLRKICNHPDLFSGGPKVLKSVPDNEIDEVDQFGYWKR
SGKMIVVESLLKIWHKQGHRVLLFTQSRQMLHILEAFLRERNYSYLKMDGTTTIASRQPL
ITRYNEDKSIFIFLLTTRVGGIGINLTGADRVIIYDPDWNPSTDTQARERAWRIGQTKQV
TVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDGSQGTE
TSAIFAGTGSDVQAPKRQSKRKFAKPPDNASESGLHLKGHISSKYSKPSCSPSTGHLTNS
SEGAEAVGKTKGNSDTFNPNYATEGDSQVLHNMDSLVNGEDKSLDTVDRSVLQPLPGNAG
TPENLGFISEVHGAPGVSIERGTDCSQEKQKADFEVRQLGSNHCKCTSKTKHSVDMLARE
GCKNNQKKPKNKKDARFEGERISHLVKQKQYRKEDNEEKEDDQKKNDDYVLEKLFKKSGV
HSVMKHDVIMEASSPDYVLMEAEANRVAQDALRALKISRQRCLGAAFGVPTWTGSSGLSG
APSGIKSRFGQKKNPMLQDPSPGKKCKEVDNIKKENIKKSISSMHFDGKTEAGESSYSVL
DSSSLLAKMRARNHLILPQRTENEGVENHQQASAPLPASTEHDDLLVDVRNFIAFQACVD
GQASTREILEAFESKLSSAQSCVFRELLRNLCIFHRSPNGEGIWKLKPDFR
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaacagagactagccaccccccagacagtagccaagaagaggcggcagtggct
gttgtgagtgataagaatctaaatgactctgaggaaacggggattggacaagaaaatgag
ttgtgcgatggtgacttggaggacagtcttggaggagctcttgctacggagaataggcca
tccacatctatggctcctttttttgagctgtcaaggaaaaaacaaccactgttacatatt
gacagacagcagatccagtgtgttgcacacggtgctcaaactgctgagctgaaaggtttg
ggagttgatgtttatgatcaagatatattggaacaaggagtccttcagcaggtagataat
gcaattaatgaagctaacaagacaacaaaaatagctgatgcagagaaggaatatcagtca
gttcttgatgacttacggtcatgtgtaacatctttgaaacacatcaatgcaattattgag
caacttaccccacaagctgcaaaaagcaaagatataaacagaaaactagattccgtaaaa
cggcaaaagtataacaaggaacaacagctaaagaaaatcaaagcaaaacagaagcgtctc
caggcaattcttggtggagaagagagtttcattgaagcaaacaatattgaatttgaggct
gatgaagagcctggtccatcatcccttggcagtatgcttatgccagctcaggaaacagaa
tgggaggagcttattcgcactggccacatgaccccttttgggactaaagtccctcaaaag
ccagaaaagaagccacgcaggctagtgctaactgaagcatctgattttgagaagtactta
gcagatcaagctaaattgtcatctgaaaggaagaggctatcttttaagaaaagagcaaag
aagaaagcacagtctaagaacattcagtgtgcaatgcccacattaaccctaaagggaaaa
aatggcaaaactagacccctctcaacaacagacaagtgtgtgaaaaagcgtttgaagaaa
cttcagaaccatgctcttcagatccattccaagtcaggaatcccaaaggaaaagagacct
cttgaggccaaggggaagatgggagtccatgatggggatgatagtgaaaattcagattat
gtgccagatgaggagcttttcaaccctgaagaggaagagcaggaggaagaggcacttttt
tatgctgatgatgattctgattatgaactcaagactttgttaagacaaagaaaatctttg
aagaaagacctaaaggaagaagctgaagatgatgatttcttcccaagttcagaggaagag
gaagaagagaacaaaataggaaaacgcagaataaaaagatgcaaagatgatggagatgaa
gattgctataaacaaaggctaaggaggtggaataaacagcgattgaaggacaaagaggaa
catcggatggcagaagaagattcagatgaaagtgatgctgaatttgaagagggtttcaga
gtaccaggattcctctttaaaaagctttttaagtatcagcagacaggtgttaggtggctc
tgggaattgcactgccagcaggcaggaggaattctgggagatgaaatgggattgggcaag
accatccagataattgccttcttggcaggtctgagctacagcaagatcaggactcgtggt
tcaaattacagatacaaggggttgggcccaacaataattgtttgtccaacgacagtaatg
caccagtgggtgaaagaattccacacatggtggcctccctttagagttgcagttcttcat
gaaactggctcttatactaacaaaaaggtgaaactaattcatgaaattgctggatgccat
ggcattctgattacctcctattcctacattcggctgatgcaggataatatccacagctat
gattggcattatataattttagatgaaggtcataaaattagaaatccaaatgctgccatt
acacttgcatgcaaacagttccgcactccccatcgaatcatcttgtctggctcccctgtg
caaaataacctaaaggagctctggtccctctttgactttgtattcccaggaaaattggga
acgctgcccgtcttcatggaacaattttctgtcccaataaccatgggaggatattccaat
gcctctcctgtgcaggtcaaaactgcctacaagtgtgcatgtgttttacgggacaccata
aatccctacttgctgcggagaatgaaggctgatgtgaaaatgagcctttcgttaccagat
aaaaatgaacaggtcttgttttgccgtttgacagctgagcaacgtcaagtctatcaaaag
ttcattgactccaaagaagtttaccagatcctcaatggagaaatgcagattttctctgga
cttgtaggattgagaaaaatctgcaatcatcctgatcttttctctggtggccccaaggtc
ttgaaaagtgtaccagataatgagatagatgaagtggatcagtttggatattggaaacgt
tctggaaaaatgatagtggtagagtcactgctgaaaatatggcataagcagggtcacaga
gtgctgctgtttactcagtcaagacagatgctacacatccttgaagcatttttgagagag
agaaactattcctacctcaagatggatggtactacaacaatcgcatccagacagcctctt
ataacaagatataatgaggataaatccatatttatttttcttcttacaactcgagttggt
ggcattggaatcaacctgacaggtgctgacagggttattatctatgatcctgactggaat
cccagtacagacacacaggctcgagagcgtgcttggagaataggccagacgaaacaggtg
actgtgtacaggcttcttactgcaggtacaatagaagagaagatttaccacagacaaatc
ttcaaacagtttttaacaaacagagtgttgaaagatccaaaacaaaggcgatttttcaaa
tccaatgatctttatgaacttttcactctgagcagcccagatgggtctcaaggaacagaa
actagtgctatttttgcaggtactgggtcagatgttcaagctccaaaacgtcaatcaaaa
cgaaaatttgcaaagccacctgataacgcttctgaaagtggtctccatcttaaaggacac
atttcatctaaatacagcaagccctcatgttccccctcaacaggacatctaactaattcc
tctgaaggagctgaggcagttggcaaaaccaaaggaaactctgatacttttaacccaaat
tatgctacagaaggtgactcacaagtacttcataatatggattcattggttaacggtgaa
gacaagagtttagacacagttgacaggtctgtgttacagccactcccagggaatgctggg
actccagagaaccttggattcattagtgaagttcatggagcacctggtgtaagtattgag
aggggaaccgactgctcacaggaaaagcagaaagcggattttgaagttcgacagttaggt
agtaatcattgtaaatgcacctcaaaaacaaaacacagcgtagatatgctggcacgtgag
ggctgcaagaataaccaaaagaagccaaaaaataaaaaagatgccagatttgaaggggaa
cgtatctcacatctagtaaaacaaaaacaatacaggaaagaggacaatgaagagaaggag
gatgatcaaaagaagaatgatgattatgtcttggagaaacttttcaaaaagtcaggagta
cacagtgttatgaagcatgatgttattatggaagcttccagtccagattacgtgctaatg
gaagccgaagcaaaccgagtggcccaggatgccttaagagccttaaagatctcccgacag
cgatgtttaggagcagcttttggtgtgccaacctggacaggcagcagtggtctatctggt
gccccatcaggaataaagagtaggtttggccaaaagaaaaatcctatgctacaagaccca
tctcctggaaagaaatgcaaggaggttgataatataaagaaagagaatataaagaagagc
atttccagcatgcattttgatgggaaaacggaagcaggagagtcatcatatagtgtacta
gattcatcatctttgttagctaagatgagggctaggaaccaccttatattacctcagagg
acagagaatgaaggcgttgaaaatcatcagcaagcttctgctcctcttccagcctcaaca
gagcatgacgacttgctagtggatgttcgaaactttattgcattccaggcttgtgtagat
ggacaggccagtactcgggagatactggaggcatttgagtccaagttatcatcagcacag
tcttgtgtctttcgagaacttctgagaaatctttgtattttccacagaagtccaaatggt
gaaggtatttggaaactaaagccagatttccgctga
DBGET
integrated database retrieval system
