Alligator mississippiensis (American alligator): 102575507
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Entry
102575507 CDS
T03087
Symbol
COL9A2
Name
(RefSeq) collagen type IX alpha 2 chain
KO
K08131
collagen type IX alpha
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04510
Focal adhesion
amj04512
ECM-receptor interaction
amj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102575507 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102575507 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102575507 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
amj00535
]
102575507 (COL9A2)
Proteoglycans [BR:
amj00535
]
Extracellular matrix (ECM) proteoglycans
Others
102575507 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102575507
NCBI-ProteinID:
XP_014460545
UniProt:
A0A151PGA7
LinkDB
All DBs
Position
Un
AA seq
690 aa
AA seq
DB search
MAGAPGSLTLCLVLHAICLCLAQIRGPPGDPGPPGPPGPPGVPGSDGIDGDKGPPGAAGS
PGSKGEPGPPGPDGPPGKAGIDGLTGAKGEPGPIGRPGPKGQPGLLGPPGLPGPSLPGPP
GPPGQVGLPGEIGALGPKGDPGPDGPRGPPGPPGRPGPPGHIQGLEGSADFLCPTNCPPG
PKGPQGLQGLKGHRGRPGALGESGRQGRPGPKGDVGVSGEQGIPGPPGPLGPRGYPGMEG
PKGETGPSGYKGMIGSVGESGKPGEEGPKGPPGGAGEKGDTGGRGIRGPQGDLGPKGENG
LPGIDGKDGTPGIPGVKGSTGQPGRPGPPGHRGMAGLPGQSGTKGGPGAKGEPGPRGLAG
ITGPSGQMGEPGPPGEQGPQGVPGLKGDRGERGPVGPQGVQGKVGSKGEQGPPGIPGSQG
LPGVKGDKGFPGKIGSKGGIGDPGVEGLPGEKGEKGESGEPGPKGQQGIRGEPGFAGPSG
DAGSPGVRGYPGPPGPRGLNGERGVPGMPGRQGMPGRDAGDQHIVDVVLKMLQEQLAEVA
VSAKRAALGEVGVMGLPGPPGPPGPPGEQGLHGPPGPRGIPGILGAMGQIGNTGPKGKRG
EKGERGDVGHGHQGMPGPPGIPGLPGIPGHALNGKDGERGPPGSSGQPGRPGLPGPAGLP
GFCEPAACLGASAYASARLTEPGAVKGPMY
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgccccgggtagcctgacgctctgccttgttctccacgccatctgcctgtgc
ctggctcagattcgaggtccaccaggagatcctggaccaccagggcccccgggtccgcca
ggagtgccaggatctgatggcatcgatggtgacaagggcccaccgggcgctgccgggtcc
ccgggctccaagggggaaccaggacctccgggcccagatgggcctccagggaaggcaggc
attgatggcctgacaggagcaaaaggggaaccagggcccatcggacgtccaggacctaaa
ggccagcctggacttctagggcctccgggactccctggcccgtcgctgccaggaccacct
gggcctccaggtcaggttggacttcctggggaaatcggtgccttgggacctaagggggat
cctggacctgatggaccacgaggccccccaggaccccccggaagacctggcccaccggga
cacatccaaggcctagaaggcagtgctgacttcttgtgtccaaccaactgcccgccagga
cccaaaggcccccagggactgcagggcctgaagggacacagaggccgccccggtgccctt
ggggagtcgggcagacagggcaggccgggtcccaaaggcgacgtgggtgtttccggcgaa
caaggcatcccaggccctccaggtcctttgggacccaggggttaccctggcatggagggt
ccaaaaggcgagacgggacccagtggttataaaggaatgattggctctgttggagagtct
ggaaagccgggtgaggagggacccaaagggccacccgggggagccggtgagaagggagat
actggtggccgtggcatcaggggaccccagggggacctgggtcccaagggggagaatggt
ctccctggcattgatggtaaagatggcacccccggcatccctggtgtgaaggggagcaca
gggcaaccgggccgcccaggaccaccggggcaccgagggatggctggtttaccaggccaa
tctggcaccaaaggcggcccaggagcaaagggtgagccaggtccccgcgggctggcagga
attaccggaccttcggggcaaatgggtgagcccggacctccaggtgagcaagggccacaa
ggtgtccctgggctgaagggcgatcggggtgagcgtggccctgtgggtccccaaggtgtt
caggggaaagtgggatctaaaggggagcagggtcctcccggcatcccaggatcccaaggc
ctgccaggtgtcaaaggagacaagggctttccaggaaaaattggctccaaaggtggcatt
ggagaccctggcgtggaaggtcttcccggggagaagggggagaagggtgaatcaggtgag
ccaggaccaaaggggcagcaaggcatccgtggtgagcctggctttgctggtccttctggt
gatgctggctcacctggtgtaagaggttacccaggaccaccaggccctcgtgggctcaac
ggagagcgcggcgtgccaggaatgcctgggcggcaaggcatgccgggccgggatgctggg
gaccagcacattgttgatgtggtcttgaagatgttgcaagaacagctggcagaggtggca
gtgagcgccaagagagcagctttaggtgaagttggtgtgatgggactgcctggtccccca
gggccccctgggccacctggtgagcaaggcctgcatggacctcctggaccacgtggcatc
ccaggcattttaggagccatggggcagattggcaacactgggcccaaagggaagcgagga
gagaaaggagagcgtggagatgttggacatggacatcagggcatgccgggacctccggga
atcccaggtcttcctggcatccccggccatgccctcaatggcaaagatggagagcgaggc
cctcctggatcctctgggcaaccgggacgacctgggttacctgggccggctggtctcccc
ggattctgcgagcccgctgcctgcttaggagcctctgcttatgcctcggcacgtctaact
gagccaggagctgtcaaaggacctatgtactga
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