Alligator mississippiensis (American alligator): 102575604
Help
Entry
102575604 CDS
T03087
Symbol
USP13
Name
(RefSeq) ubiquitin specific peptidase 13 (isopeptidase T-3)
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amj01002
]
102575604 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102575604 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amj04147
]
102575604 (USP13)
Enzymes [BR:
amj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102575604 (USP13)
Peptidases and inhibitors [BR:
amj01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102575604 (USP13)
Ubiquitin system [BR:
amj04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102575604 (USP13)
Exosome [BR:
amj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102575604 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UBA_7
UBA
zf-UBP_var
zf-UBP
UCH_1
UBA_9
UBA_4
UBA_3
UBA_8
Motif
Other DBs
NCBI-GeneID:
102575604
NCBI-ProteinID:
XP_014461722
LinkDB
All DBs
Position
Un
AA seq
862 aa
AA seq
DB search
MQRAALLGGGRDAQMAAADLGEMLVPYMPTIRVPKAGDRVYKAECAFSYDSPDSEGGLYV
CMNTFLGFGREHVERHYRKTGQCAYMHLKRHVIEKVTGAAGGALPKRSNGKLFLDLETNG
DLNNDDYEYEDEAKLVIFPDHYEISLPNIEELPALVTIACDALLSSKSPYRKQDPDSWEE
ELQASKHAKSLVQLDNGVRIPPSGWKCSKCDLRENLWLNLTDGSVLCGKWFFDGSGGNGH
ALEHYKEMGYPLAVKLGTITPDGADVYSFEEEEAVLDPHVAKHLAHFGIDMLQMQGTENG
LRDNDIKPRVSEWEVIQESGMKLKPMYGPGYTGMKNQGNSCYVNAVMQAIFSIPEFQRAY
VGNLPRIFDYSPLDPTQDFNTQMVKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQHNGI
SPRMFKALISKGHPEFSSNRQQDAQEFFLHLINLVERNPVGSENPSEVFRFLVEERTQCC
QSRKVRYTERVDYIMQLPVAMEAATNKDELIAYELKRREAEAARRPPPELVRARIPFSAC
LQAFSEPSNVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWIPKKLDVSID
MPDLLDVSHLRATGLQPGEEELPDIAPPIVIPDDPKGHVMNHFMELPDIDDSSVMQLAEM
GFPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLVIPGFGGVAAAGAAGLGVIGL
DNQPPEEMVAIVVSMGFQRNVAIQALKATNNNLERALDWIFSHPEPEEDSETASDVMYKE
NNANANILTEAGSEGPRVRDGSGRYELFGFISHMGTSTMSGHYVCHLKKEGRWVIYNDLK
VCASERPPKDLGYIYFYHRIPS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcgccgcgctcctgggcggcgggcgggatgcgcagatggcggcggcggacctg
ggcgagatgctggtgccctacatgcccacgatccgcgtgcccaaggccggcgaccgcgtc
tacaaggcggagtgcgccttctcctacgactcgcccgattctgaaggaggtctctacgtg
tgcatgaacacgtttctgggatttggaagggaacatgttgaaaggcattatcggaaaacg
ggacagtgtgcatatatgcatctgaaacgacatgtgatagagaaggtaacaggggctgca
ggtggagccttacccaaaaggagtaatgggaagctatttttagatctagaaacaaatggt
gatttaaacaacgatgattatgaatatgaagatgaagccaagcttgttatatttccagat
cattatgaaatctcattaccaaacatagaagagttaccagcactggtgacgatagcttgc
gatgcccttctcagctccaaatctccctaccgaaagcaggaccccgattcctgggaagaa
gaactacaagcatctaaacatgccaaatcacttgtacagttagataatggcgttcggatc
ccccccagtggctggaaatgctcaaagtgtgacctgcgggagaatctctggttgaacctg
acggatggctcggtgctgtgtggaaaatggttttttgatggcagtgggggaaacgggcat
gctctggaacactacaaagagatgggatatccattagcggtgaagctaggaaccatcact
cctgatggtgcagatgtctattcctttgaggaggaggaggcagttttagatccacacgtg
gcaaagcacttggcacactttgggattgacatgctccagatgcaagggacagagaacggt
ctaagagataacgacatcaagccaagagtctctgagtgggaggtaattcaggaatctggc
atgaagctgaaacccatgtatggcccaggatacactggcatgaaaaaccagggaaatagc
tgctacgtcaacgctgtcatgcaggccattttcagcatccctgagtttcagcgagcgtac
gtgggaaaccttcctagaatatttgactactcgcctctcgatccaacgcaggatttcaac
acacagatggttaaattaggacacggcctcctttcaggccagtactctaagccaccagtg
aaatctgagcttattgaacaggtgatgaaagaagaacacaagcctcagcacaatggaatt
tctcctcgaatgtttaaggctttgataagtaaggggcaccctgaattttcctccaataga
cagcaagacgcacaggagtttttcctgcaccttataaatcttgtagagagaaaccctgtt
ggttcagaaaaccccagcgaggtttttcggttcctggtggaagaacgcacgcagtgctgc
cagtcccggaaagtccggtacacagagagggtcgactatatcatgcaactgccggtggct
atggaggcagcaacaaacaaagatgaattaattgcctatgaactaaagaggagagaggca
gaagctgctaggagaccaccaccagagctcgtccgtgccaggatcccgtttagcgcgtgt
ctgcaggccttttctgaaccgagcaatgtagatgacttctggagcagtgcccttcaagca
aaatctgcaggagttaaaacatctcgttttgcttcgtttcctgagtacttggttgtgcag
ataaagaagttcacctttggtctggactggatacccaagaagcttgatgtttccatagac
atgccagatctactagacgtcagtcacctccgtgccacaggcctccagccaggagaagag
gaacttccagacattgctccacccattgtcattcctgatgaccccaaaggtcacgtgatg
aaccatttcatggagcttccagatatcgatgattcttcagtgatgcaactagcggagatg
ggcttcccattggaagcatgtcggaaagctgtttactatactggcaacttgggtgcagag
gtggctttcaactggatcatcgcacacatggaagaaccagattttgccgagccgctcgtt
atacctggttttggaggagttgctgccgctggagcagctggtttaggggtcatcgggtta
gataaccaacctccagaagagatggtagctattgtcgtctccatgggcttccagaggaat
gtagctattcaggcactaaaggcaacaaataataatttggagcgtgcactggactggatc
ttcagtcaccctgagcctgaggaagacagcgagacagcttcggatgtgatgtataaggag
aataatgctaatgccaacatccttacagaggcaggttcagaggggcccagggtcagagat
gggtctggaagatatgagctctttggattcatcagccacatgggaacatccacgatgagt
ggtcactatgtttgtcatctcaaaaaggaaggcagatgggtgatctacaatgaccttaaa
gtctgtgcctcagaacgacctcccaaagacctgggctacatttacttctaccacaggata
ccaagttag
DBGET
integrated database retrieval system
