Alligator mississippiensis (American alligator): 102575627
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Entry
102575627 CDS
T03087
Symbol
SHOC2
Name
(RefSeq) SHOC2, leucine rich repeat scaffold protein
KO
K19613
leucine-rich repeat protein SHOC2
Organism
amj
Alligator mississippiensis (American alligator)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_9
LRR_5
LRR_13
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
102575627
NCBI-ProteinID:
XP_006270818
UniProt:
A0A151NUN5
LinkDB
All DBs
Position
Un
AA seq
582 aa
AA seq
DB search
MSSNLGKEKDCKEKDPKVPSAKEREKEAKASGGLGKESKEKEPKTKGKDAKDGKKDSSSA
QPGVAFSVDNTIKRPNPAPGARKKSSNAELIKELNKCREENAIRLDLAKRSIHMLPSSIK
ELTQLTELYLYGNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLAMLDLRHNK
LREIPSVVYRLCSLATLYLRFNRVTTVEKDIKNLSRLTTLSIRENKIKQLPAEIGELCNL
ATLDVAHNQLEHLPEEIGNCTQITKLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSSIP
KSFSKCSELEELNLENNNISTLPEGLLSSLVKMTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWISMVDLNLATNQLSKIPED
VSGLVSLEVLILSNNLLRKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaatctaggaaaagaaaaagactgtaaagagaaggatccaaaagtcccgtct
gcaaaagagagagagaaggaggccaaggcgtctggaggacttgggaaagagagtaaagaa
aaggagcctaagaccaaagggaaagatgccaaagatggaaaaaaggactccagtagtgcg
cagcctggggtggctttttcagtggacaacacgataaaacgacctaatccagccccaggc
gctcgcaaaaaatccagcaatgctgagttgatcaaagagctaaataaatgccgggaagag
aatgcgattcgcttggacttagccaagaggtctatacacatgcttccatcgtctatcaaa
gagttgacacagctaacggaactttatttatacggtaacaaactgcagtccttaccggcc
gaggtgggctgtctcgtgaatctggtgacactggcactgagtgagaactcgcttaccagt
ttgcctgactctcttgataacttgaagaaattggccatgcttgacttgcggcataacaaa
cttagagaaattccttcggtggtgtacaggctatgttctctcgccactctttatctacgc
tttaatcgtgtaactactgtggaaaaggatatcaaaaacttgtcaagactcaccacgctt
agcatacgagagaacaaaattaagcaactacctgctgaaatcggtgagttgtgtaacctt
gcaacgctggatgtagcgcacaatcagcttgaacatcttccagaggagattgggaattgc
acgcagatcaccaaacttgacttgcagcacaatgaactcttggacctgccagaaactata
ggaaacctgtctagtttaagtcgtcttggcctgaggtacaataggctgtcgtcaattccg
aagtcgttttcaaaatgcagcgaacttgaagaactgaatttggagaacaacaacatttct
actttaccagagggacttttatccagtcttgtgaagatgactagtttaacactagccagg
aattgcttccagtcgtaccccgtgggtggtccatcacaattctctacaatctattctctc
aacatggaacacaaccgcatcaataaaatcccctttggaattttctctagagcgaaagtg
ttaagcaagctgaacatgaaggacaatcagctaacctctcttcctttggactttggaacg
tggattagtatggtagacctgaatttagccactaatcagctctcaaaaattcctgaggat
gtctctgggctggtttcccttgaggttcttatcttgtcaaacaatcttctaaggaaactt
ccccatggcattggaaatctgcggaaactgcgagaattggatctagaggagaacaaactg
gaatccttgccaaatgaaatagcttaccttaaggatctgcagaaattagttttgactaat
aatcagttgaccacccttccaagaggaattggccaccttaccaatctgacgcatcttggg
cttggagagaatcttcttacacaccttcctgaagaaattggtacactggagaatctggaa
gaactgtatttgaatgacaaccccaatctacacagccttccttttgagctggcgctctgc
agcaaactatcaataatgagcattgagaactgcccactcagccaccttccgcctcagatc
gttgctggaggaccctcattcatcattcagttcctaaaaatgcagggaccatatcgtgcc
atggtctga
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