Alligator mississippiensis (American alligator): 102575633
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Entry
102575633 CDS
T03087
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj00260
Glycine, serine and threonine metabolism
amj00630
Glyoxylate and dicarboxylate metabolism
amj00670
One carbon pool by folate
amj01100
Metabolic pathways
amj01200
Carbon metabolism
amj01230
Biosynthesis of amino acids
amj01240
Biosynthesis of cofactors
amj04981
Folate transport and metabolism
Module
amj_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
102575633 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
102575633 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
102575633 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
102575633 (SHMT1)
Enzymes [BR:
amj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
102575633 (SHMT1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
102575633
NCBI-ProteinID:
XP_006272772
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All DBs
Position
Un
AA seq
485 aa
AA seq
DB search
MATPTNLNGELPSAEIWQSHNKMVLEPLDTNDPEVFNIIKKEKQRQRLGLELIASENFAS
RAVLEALGSCLNNKYSEGYPGQRYYGGTECVDELERLCQKRALEAYNLDPQKWGVNVQPY
SGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVDPST
GYIDYDRLEENARLFHPKLIIAGVSCYSRNLDYARMRRIATENGAYLLADMAHISGLVAA
GVVPSPFEHCDVVSTTTHKTLRGCRAGMIFYRKGTRSVDPKTGKETPYNLESLINQAVFP
GLQGGPHNHAIAGIAVALKQAMTPEFRVYQRQVVANCKALAAALLGMGYHIVTGGSDNHL
ILVDLRSKGTDGGRAERVLEICSIACNKNTCPGDKSALRPSGLRLGTPALTSRGFQEQDF
HRVAVFIHKGIELTLKVQSDMSPKATLKEFKEHLGDEKYQGPLQALKEEVEAFAATFPIP
GLPVL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctaccccaaccaacctcaacggcgagctcccgagtgctgaaatctggcagtcgcat
aacaagatggtcctggaaccgctcgataccaatgaccccgaggtgttcaacatcatcaag
aaggagaagcagcggcagaggctgggcttggaactgatcgcctccgagaactttgccagc
cgggctgtgctggaggccctgggctcctgtctgaacaacaagtactcggaggggtaccca
gggcagaggtactacggcggcacggagtgcgtggacgagctggagaggctgtgtcagaag
agggcactggaggcctacaacctggacccccagaagtggggtgtcaatgtccagccctac
tcagggtccccagctaactttgcggtatacacggcactggtggagccccacggcaggatc
atgggcctggacctgcctgatggggggcacctgacccatggcttcatgactgagaagaag
aagatctcagccacctccatcttcttcgagtccatgccctacaaggtggatcccagcacc
gggtacatcgactacgaccggctggaggagaacgcccgcttgttccaccccaagctgatc
atcgcgggggtgagctgctattcgcggaacctggactatgcccgcatgcggaggatcgcc
accgagaacggagcctacctgctggccgacatggcccacatcagcgggctggtggcagct
ggtgtggtgccctcacctttcgagcactgcgatgtggtctccaccaccacccacaagacg
ttgcggggatgccgggccggcatgattttctaccgcaaagggacacgcagcgtggacccc
aagacgggcaaggagacgccctacaacctggagagcctcatcaaccaggctgtcttccct
gggctgcaaggggggccacacaaccatgccattgcaggaattgccgtggcactcaagcaa
gccatgacccccgagttcagagtctaccagcggcaagtggtcgccaactgcaaggccctg
gccgcagcgctgcttggcatgggctaccacatagtcactggtggctccgacaaccatctc
atcctcgtggacctgcgcagcaagggcacggatggcggcagggccgagcgggtgctggag
atctgctccatcgcctgcaacaagaacacctgtccgggtgacaagagtgccctgcgcccg
agcgggttgaggctgggcaccccggcgctgacctcccggggcttccaggaacaggacttc
cacagggtggccgtcttcatccacaagggcattgagctgacgctgaaggtccaaagcgac
atgagtcccaaggcgacgctgaaggagttcaaggagcacctgggcgatgaaaagtaccag
gggccactgcaggccctcaaggaggaggtggaggcctttgctgcgacattccccatcccg
ggtctgcctgtgctttaa
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